PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000415576	[[23713815, 23714031], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772788]]	[[23713929, 23714031], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]
ENST00000538664	[[23713815, 23714031], [23720008, 23720073], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23713929, 23714031], [23720008, 23720073], [23724522, 23724547]]
ENST00000343848	[[23713837, 23714031], [23724522, 23724535], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23713929, 23714031], [23724522, 23724535], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]
ENST00000308268	[[23713840, 23714031], [23724522, 23724649], [23731803, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23713929, 23714031], [23724522, 23724649], [23731803, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]
NM_001308188	[[23713810, 23714031], [23720008, 23720073], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23720049, 23720073], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]
NM_001025097	[[23713815, 23714031], [23724522, 23724535], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23713929, 23714031], [23724522, 23724535], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]
NM_001025096	[[23713815, 23714031], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23713929, 23714031], [23724522, 23724649], [23731821, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]
NM_144662	[[23713815, 23714031], [23724522, 23724649], [23731803, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23773319]]	[[23713929, 23714031], [23724522, 23724649], [23731803, 23731946], [23738085, 23738208], [23758793, 23758913], [23759031, 23759094], [23772282, 23772375]]

Promoter

Chrom	Start	End	Description
chr18	23713808	23713861	CAGE_peak_1_at_PSMA8_5end
chr18	23713873	23713887	CAGE_peak_2_at_PSMA8_5end
chr18	23713913	23713919	CAGE_peak_3_at_PSMA8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I026171	26171001	26171400	0.5	[{'connected_gene': 'DHFRP1', 'score': 550.77}, {'connected_gene': 'PSMA8', 'score': 0.28}]
chr18	GH18I026151	26151217	26151366	0.2	[{'connected_gene': 'PSMA8', 'score': 0.37}, {'connected_gene': 'DHFRP1', 'score': 0.34}]
chr18	GH18I026133	26133277	26134247	1.43	[{'connected_gene': 'PSMA8', 'score': 550.77}, {'connected_gene': 'TAF4B', 'score': 5.95}, {'connected_gene': 'GC18P026127', 'score': 0.44}]
chr18	GH18I026190	26190354	26192056	0.87	[{'connected_gene': 'GC18M026312', 'score': 550.77}, {'connected_gene': 'SS18', 'score': 5.34}, {'connected_gene': 'NPM1P2', 'score': 0.39}, {'connected_gene': 'PSMA8', 'score': 0.22}]