PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000550916	[[75784849, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75826468]]	[[75784896, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75824941]]
ENST00000378689	[[75784859, 75785130], [75796796, 75796883]]	[[75784896, 75785130], [75796796, 75796883]]
ENST00000435775	[[75784859, 75785130], [75804213, 75804459], [75816683, 75816769], [75824494, 75824521], [75824603, 75825591]]	[[75784896, 75785130], [75804213, 75804459], [75816683, 75816710]]
ENST00000378692	[[75784880, 75785130], [75796796, 75796926], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75825663]]	[[75804300, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75824941]]
ENST00000320460	[[75784888, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75817820]]	[[75784896, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75816861]]
ENST00000547164	[[75784896, 75785130], [75804213, 75804459], [75816683, 75816712]]	[[75784896, 75785130], [75804213, 75804459], [75816683, 75816710]]
ENST00000441218	[[75785309, 75785348], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75825655]]	[[75785309, 75785348], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75824941]]
NM_152436	[[75784849, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75817820]]	[[75784896, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75816861]]
NM_001270396	[[75784849, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75826177]]	[[75784896, 75785130], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75824941]]
NR_072995	[[75784849, 75785130], [75796796, 75796926], [75804213, 75804459], [75807377, 75807481], [75816683, 75816769], [75824494, 75824521], [75824603, 75826177]]	None

Promoter

Chrom	Start	End	Description
chr12	75784859	75784892	CAGE_peak_1_at_GLIPR1L2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I075329	75329521	75330930	2.06	[{'connected_gene': 'CAPS2', 'score': 561.17}, {'connected_gene': 'KRR1', 'score': 35.65}, {'connected_gene': 'LOC100652897', 'score': 18.29}, {'connected_gene': 'GLIPR1L2', 'score': 11.17}, {'connected_gene': 'ENSG00000273987', 'score': 0.77}, {'connected_gene': 'LOC100419702', 'score': 0.34}]
chr12	GH12I075456	75456761	75458338	0.94	[{'connected_gene': 'GLIPR1L2', 'score': 62.94}, {'connected_gene': 'CAPS2', 'score': 14.23}, {'connected_gene': 'BBS10', 'score': 13.6}, {'connected_gene': 'GLIPR1', 'score': 12.17}, {'connected_gene': 'KRR1', 'score': 10.65}]
chr12	GH12I075388	75388512	75392449	2	[{'connected_gene': 'GLIPR1L2', 'score': 629.73}, {'connected_gene': 'CAPS2', 'score': 550.77}, {'connected_gene': 'KRR1', 'score': 17.65}, {'connected_gene': 'GLIPR1', 'score': 11.27}, {'connected_gene': 'GLIPR1L1', 'score': 0.22}]
chr12	GH12I075629	75628661	75628810	0.74	[{'connected_gene': 'GLIPR1L2', 'score': 21.73}, {'connected_gene': 'ENSG00000251893', 'score': 10.38}, {'connected_gene': 'GC12P075601', 'score': 0.31}, {'connected_gene': 'RPL10P13', 'score': 0.21}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075627	75627532	75628533	0.31	[{'connected_gene': 'GLIPR1L2', 'score': 24.9}, {'connected_gene': 'ENSG00000251893', 'score': 10.38}, {'connected_gene': 'GC12P075601', 'score': 0.31}, {'connected_gene': 'RPL10P13', 'score': 0.21}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075270	75270241	75270390	0.2	[{'connected_gene': 'GLIPR1L2', 'score': 23.42}, {'connected_gene': 'KCNC2', 'score': 11.04}, {'connected_gene': 'CCNG2P1', 'score': 0.39}, {'connected_gene': 'LOC100130268', 'score': 0.28}, {'connected_gene': 'LOC100419702', 'score': 0.28}, {'connected_gene': 'CAPS2', 'score': 0.13}]
chr12	GH12I075341	75341604	75342710	0.43	[{'connected_gene': 'GLIPR1L2', 'score': 15.76}, {'connected_gene': 'GLIPR1L1', 'score': 0.44}, {'connected_gene': 'CAPS2', 'score': 0.25}]
chr12	GH12I075505	75505619	75506510	0.74	[{'connected_gene': 'GLIPR1L2', 'score': 63.56}, {'connected_gene': 'GLIPR1L1', 'score': 11.89}, {'connected_gene': 'GLIPR1', 'score': 11.23}, {'connected_gene': 'CAPS2', 'score': 10.96}, {'connected_gene': 'PHLDA1', 'score': 10.28}, {'connected_gene': 'KCNC2', 'score': 8.78}, {'connected_gene': 'KRR1', 'score': 0.44}, {'connected_gene': 'ENSG00000257497', 'score': 0.37}]
chr12	GH12I075553	75553000	75554767	0.66	[{'connected_gene': 'GLIPR1L2', 'score': 29.5}, {'connected_gene': 'ENSG00000257497', 'score': 13.4}, {'connected_gene': 'PHLDA1', 'score': 10.32}, {'connected_gene': 'BBS10', 'score': 9.89}, {'connected_gene': 'GC12P075544', 'score': 0.44}, {'connected_gene': 'PGDP2', 'score': 0.25}]
chr12	GH12I075633	75632601	75632958	0.62	[{'connected_gene': 'GLIPR1L2', 'score': 26.5}, {'connected_gene': 'ENSG00000251893', 'score': 11.8}, {'connected_gene': 'PHLDA1', 'score': 10.63}, {'connected_gene': 'GC12P075601', 'score': 0.29}, {'connected_gene': 'RPL10P13', 'score': 0.22}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075634	75633648	75636862	1.34	[{'connected_gene': 'GLIPR1L2', 'score': 32.54}, {'connected_gene': 'ENSG00000251893', 'score': 11.81}, {'connected_gene': 'PHLDA1', 'score': 10.63}, {'connected_gene': 'GC12P075601', 'score': 0.28}, {'connected_gene': 'RPL10P13', 'score': 0.23}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075638	75638649	75643122	1.27	[{'connected_gene': 'GLIPR1L2', 'score': 33.67}, {'connected_gene': 'ENSG00000251893', 'score': 11.82}, {'connected_gene': 'PHLDA1', 'score': 10.63}, {'connected_gene': 'KRR1', 'score': 6.63}, {'connected_gene': 'GC12P075601', 'score': 0.26}, {'connected_gene': 'RPL10P13', 'score': 0.25}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075578	75578099	75582913	0.8	[{'connected_gene': 'GLIPR1L2', 'score': 29.18}, {'connected_gene': 'ENSG00000251893', 'score': 10.93}, {'connected_gene': 'PHLDA1', 'score': 9.73}, {'connected_gene': 'KRR1', 'score': 8.5}, {'connected_gene': 'GLIPR1', 'score': 4.98}, {'connected_gene': 'PGDP2', 'score': 0.37}, {'connected_gene': 'GC12P075544', 'score': 0.28}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075584	75584524	75586218	0.52	[{'connected_gene': 'GLIPR1L2', 'score': 29.88}, {'connected_gene': 'ENSG00000257497', 'score': 11.45}, {'connected_gene': 'ENSG00000251893', 'score': 10.57}, {'connected_gene': 'PHLDA1', 'score': 10.32}, {'connected_gene': 'PGDP2', 'score': 0.39}, {'connected_gene': 'GC12P075544', 'score': 0.26}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075562	75562072	75562366	0.22	[{'connected_gene': 'GLIPR1L2', 'score': 29.99}, {'connected_gene': 'ENSG00000257497', 'score': 11.34}, {'connected_gene': 'PHLDA1', 'score': 10.42}, {'connected_gene': 'ENSG00000251893', 'score': 10.08}, {'connected_gene': 'GC12P075544', 'score': 0.37}, {'connected_gene': 'PGDP2', 'score': 0.28}]
chr12	GH12I075564	75564227	75565323	0.58	[{'connected_gene': 'GLIPR1L2', 'score': 30.29}, {'connected_gene': 'PHLDA1', 'score': 10.42}, {'connected_gene': 'ENSG00000251893', 'score': 10.08}, {'connected_gene': 'GC12P075544', 'score': 0.34}, {'connected_gene': 'PGDP2', 'score': 0.28}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075561	75561222	75561682	0.2	[{'connected_gene': 'GLIPR1L2', 'score': 29.86}, {'connected_gene': 'PHLDA1', 'score': 10.42}, {'connected_gene': 'ENSG00000251893', 'score': 10.08}, {'connected_gene': 'GC12P075544', 'score': 0.37}, {'connected_gene': 'PGDP2', 'score': 0.28}]
chr12	GH12I075628	75628948	75629780	0.91	[{'connected_gene': 'GLIPR1L2', 'score': 25.72}, {'connected_gene': 'ENSG00000251893', 'score': 10.39}, {'connected_gene': 'KRR1', 'score': 6.99}, {'connected_gene': 'GC12P075601', 'score': 0.31}, {'connected_gene': 'RPL10P13', 'score': 0.22}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075496	75496659	75497951	0.2	[{'connected_gene': 'GLIPR1L2', 'score': 73.01}, {'connected_gene': 'KRR1', 'score': 34.87}, {'connected_gene': 'GLIPR1L1', 'score': 11.92}, {'connected_gene': 'ENSG00000257497', 'score': 11.89}, {'connected_gene': 'CAPS2', 'score': 11.33}, {'connected_gene': 'PHLDA1', 'score': 10.08}, {'connected_gene': 'GLIPR1', 'score': 0.37}]
chr12	GH12I075485	75485594	75488196	0.43	[{'connected_gene': 'GLIPR1L2', 'score': 69.89}, {'connected_gene': 'KRR1', 'score': 18.55}, {'connected_gene': 'ENSG00000257497', 'score': 16.78}, {'connected_gene': 'GLIPR1L1', 'score': 12.23}, {'connected_gene': 'CAPS2', 'score': 11.45}, {'connected_gene': 'GLIPR1', 'score': 0.44}]
chr12	GH12I075622	75622658	75624898	1.33	[{'connected_gene': 'GLIPR1L2', 'score': 27.8}, {'connected_gene': 'KRR1', 'score': 22.12}, {'connected_gene': 'ENSG00000251893', 'score': 10.37}, {'connected_gene': 'ENSG00000257497', 'score': 7.12}, {'connected_gene': 'GLIPR1', 'score': 4.68}, {'connected_gene': 'GC12P075601', 'score': 0.34}, {'connected_gene': 'RPL10P13', 'score': 0.2}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075558	75558401	75558550	0.76	[{'connected_gene': 'GLIPR1L2', 'score': 29.38}, {'connected_gene': 'KRR1', 'score': 23.65}, {'connected_gene': 'GC12P075544', 'score': 0.39}, {'connected_gene': 'PGDP2', 'score': 0.26}]
chr12	GH12I075476	75476175	75476375	0.57	[{'connected_gene': 'GLIPR1L2', 'score': 62.95}, {'connected_gene': 'GLIPR1', 'score': 4.66}]
chr12	GH12I075471	75471416	75473017	0.78	[{'connected_gene': 'GLIPR1L2', 'score': 62.26}, {'connected_gene': 'GLIPR1', 'score': 0.44}]
chr12	GH12I075444	75444336	75445361	1.14	[{'connected_gene': 'GLIPR1L2', 'score': 60.33}, {'connected_gene': 'GLIPR1', 'score': 0.28}]
chr12	GH12I075601	75601271	75603293	0.38	[{'connected_gene': 'GLIPR1L2', 'score': 28.95}, {'connected_gene': 'PGDP2', 'score': 0.77}, {'connected_gene': 'GC12P075601', 'score': 0.77}, {'connected_gene': 'RPL10P13', 'score': 0.17}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075571	75571421	75571570	0.43	[{'connected_gene': 'GLIPR1L2', 'score': 28.15}, {'connected_gene': 'PGDP2', 'score': 0.31}, {'connected_gene': 'GC12P075544', 'score': 0.31}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075550	75549615	75551744	0.58	[{'connected_gene': 'GLIPR1L2', 'score': 29.24}, {'connected_gene': 'ENSG00000257497', 'score': 9.82}, {'connected_gene': 'GC12P075544', 'score': 0.44}, {'connected_gene': 'PGDP2', 'score': 0.25}]
chr12	GH12I075492	75492146	75495963	0.2	[{'connected_gene': 'KRR1', 'score': 35.82}, {'connected_gene': 'ENSG00000257497', 'score': 24.03}, {'connected_gene': 'GLIPR1L1', 'score': 11.58}, {'connected_gene': 'CAPS2', 'score': 11.15}, {'connected_gene': 'GLIPR1L2', 'score': 11.15}, {'connected_gene': 'GLIPR1', 'score': 0.39}]
chr12	GH12I075507	75507127	75507635	0.66	[{'connected_gene': 'KRR1', 'score': 37.88}, {'connected_gene': 'GLIPR1L1', 'score': 11.89}, {'connected_gene': 'GLIPR1', 'score': 11.23}, {'connected_gene': 'CAPS2', 'score': 10.96}, {'connected_gene': 'GLIPR1L2', 'score': 10.96}, {'connected_gene': 'PHLDA1', 'score': 10.28}, {'connected_gene': 'KCNC2', 'score': 8.78}, {'connected_gene': 'ENSG00000257497', 'score': 0.37}]
chr12	GH12I075508	75508283	75513161	2.54	[{'connected_gene': 'KRR1', 'score': 622.93}, {'connected_gene': 'ENSG00000257497', 'score': 23.36}, {'connected_gene': 'GLIPR1L2', 'score': 16.04}, {'connected_gene': 'GLIPR1L1', 'score': 11.89}, {'connected_gene': 'GLIPR1', 'score': 11.21}, {'connected_gene': 'CAPS2', 'score': 10.96}, {'connected_gene': 'PHLDA1', 'score': 10.28}, {'connected_gene': 'KCNC2', 'score': 8.78}]
chr12	GH12I075501	75501700	75503665	0.2	[{'connected_gene': 'KRR1', 'score': 37.99}, {'connected_gene': 'GLIPR1L2', 'score': 27.51}, {'connected_gene': 'ENSG00000257497', 'score': 23.64}, {'connected_gene': 'GLIPR1L1', 'score': 11.93}, {'connected_gene': 'GLIPR1', 'score': 11.55}, {'connected_gene': 'CAPS2', 'score': 11.49}, {'connected_gene': 'PHLDA1', 'score': 10.08}]
chr12	GH12I075572	75571584	75572188	0.2	[{'connected_gene': 'KRR1', 'score': 23.28}, {'connected_gene': 'GLIPR1L2', 'score': 10.05}, {'connected_gene': 'PGDP2', 'score': 0.31}, {'connected_gene': 'GC12P075544', 'score': 0.31}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]
chr12	GH12I075477	75477993	75485530	2.32	[{'connected_gene': 'GLIPR1', 'score': 555.76}, {'connected_gene': 'GLIPR1L2', 'score': 73.48}, {'connected_gene': 'KRR1', 'score': 34.25}, {'connected_gene': 'GLIPR1L1', 'score': 11.77}, {'connected_gene': 'CAPS2', 'score': 11.46}, {'connected_gene': 'ENSG00000257497', 'score': 10.17}]
chr12	GH12I075448	75447041	75447210	0.49	[{'connected_gene': 'GLIPR1', 'score': 12.27}, {'connected_gene': 'GLIPR1L2', 'score': 0.22}]
chr12	GH12I075447	75447821	75447970	0.2	[{'connected_gene': 'GLIPR1', 'score': 12.27}, {'connected_gene': 'GLIPR1L2', 'score': 0.22}]
chr12	GH12I075437	75437701	75437850	0.58	[{'connected_gene': 'GLIPR1', 'score': 0.26}, {'connected_gene': 'GLIPR1L2', 'score': 0.25}]
chr12	GH12I075526	75526601	75529885	0.96	[{'connected_gene': 'LOC105369845', 'score': 550.77}, {'connected_gene': 'GLIPR1L2', 'score': 29.99}, {'connected_gene': 'PHLDA1', 'score': 12.12}, {'connected_gene': 'ENSG00000257497', 'score': 11.24}, {'connected_gene': 'ENSG00000251893', 'score': 10.37}, {'connected_gene': 'GC12P075544', 'score': 0.37}]
chr12	GH12I075333	75333941	75335367	1.85	[{'connected_gene': 'ENSG00000273987', 'score': 550.77}, {'connected_gene': 'GLIPR1L1', 'score': 550.77}, {'connected_gene': 'GLIPR1L2', 'score': 44.28}, {'connected_gene': 'CAPS2', 'score': 0.22}]
chr12	GH12I075758	75758924	75761415	0.97	[{'connected_gene': 'ENSG00000251893', 'score': 11.08}, {'connected_gene': 'PHLDA1', 'score': 7.34}, {'connected_gene': 'GLIPR1L2', 'score': 4.67}, {'connected_gene': 'LOC105369846', 'score': 0.34}, {'connected_gene': 'ENSG00000258088', 'score': 0.21}, {'connected_gene': 'ENSG00000258077', 'score': 0.07}]
chr12	GH12I075488	75488632	75490641	1	[{'connected_gene': 'ENSG00000257497', 'score': 550.77}, {'connected_gene': 'GLIPR1L2', 'score': 61.53}, {'connected_gene': 'KRR1', 'score': 23.25}, {'connected_gene': 'GLIPR1', 'score': 0.44}]
chr12	GH12I075586	75586341	75588399	0.2	[{'connected_gene': 'ENSG00000251893', 'score': 10.3}, {'connected_gene': 'ENSG00000257497', 'score': 9.1}, {'connected_gene': 'GLIPR1L2', 'score': 8.63}, {'connected_gene': 'PGDP2', 'score': 0.39}, {'connected_gene': 'GC12P075544', 'score': 0.26}, {'connected_gene': 'ENSG00000258077', 'score': 0.05}]