PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000217423	[[23666276, 23666614], [23667724, 23667838], [23669378, 23669677]]	[[23666530, 23666614], [23667724, 23667838], [23669378, 23669606]]
NM_001899	[[23666276, 23666614], [23667724, 23667838], [23669378, 23669662]]	[[23666530, 23666614], [23667724, 23667838], [23669378, 23669606]]

Promoter

Chrom	Start	End	Description
chr20	23669412	23669435	CAGE_peak_3_at_CST4_5end
chr20	23669439	23669451	CAGE_peak_7_at_CST4_5end
chr20	23669519	23669536	CAGE_peak_2_at_CST4_5end
chr20	23669548	23669561	CAGE_peak_4_at_CST4_5end
chr20	23669565	23669574	CAGE_peak_6_at_CST4_5end
chr20	23669581	23669582	CAGE_peak_11_at_CST4_5end
chr20	23669586	23669589	CAGE_peak_8_at_CST4_5end
chr20	23669590	23669615	CAGE_peak_1_at_CST4_5end
chr20	23669996	23670023	CAGE_peak_5_at_CST4_5end
chr20	23670122	23670133	CAGE_peak_9_at_CST4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I023689	23689028	23689087	0.5	[{'connected_gene': 'CST4', 'score': 550.77}, {'connected_gene': 'CST2P1', 'score': 0.34}]
chr20	GH20I023692	23692603	23693896	0.66	[{'connected_gene': 'CST9', 'score': 10.03}, {'connected_gene': 'CST1', 'score': 9.24}, {'connected_gene': 'CST3', 'score': 7.32}, {'connected_gene': 'CST4', 'score': 0.77}, {'connected_gene': 'CST2P1', 'score': 0.37}]
chr20	GH20I023704	23704377	23704420	0.22	[{'connected_gene': 'CST9', 'score': 2.02}, {'connected_gene': 'CST2P1', 'score': 0.44}, {'connected_gene': 'CST4', 'score': 0.37}]