PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367976	[[132269315, 132270700], [132271088, 132271300], [132271431, 132271683], [132271909, 132272132], [132272246, 132272513]]	[[132270403, 132270700], [132271088, 132271300], [132271431, 132271683], [132271909, 132272132], [132272246, 132272312]]
NM_001901	[[132269315, 132270700], [132271088, 132271300], [132271431, 132271683], [132271909, 132272132], [132272246, 132272518]]	[[132270403, 132270700], [132271088, 132271300], [132271431, 132271683], [132271909, 132272132], [132272246, 132272312]]

Promoter

Chrom	Start	End	Description
chr6	132269835	132269894	CAGE_peak_7_at_CTGF_5end
chr6	132269901	132269911	CAGE_peak_30_at_CTGF_5end
chr6	132269939	132269966	CAGE_peak_12_at_CTGF_5end
chr6	132270012	132270022	CAGE_peak_22_at_CTGF_5end
chr6	132270118	132270130	CAGE_peak_13_at_CTGF_5end
chr6	132270198	132270215	CAGE_peak_18_at_CTGF_5end
chr6	132270228	132270243	CAGE_peak_17_at_CTGF_5end
chr6	132270276	132270290	CAGE_peak_10_at_CTGF_5end
chr6	132270471	132270530	CAGE_peak_5_at_CTGF_5end
chr6	132270532	132270550	CAGE_peak_9_at_CTGF_5end
chr6	132270563	132270604	CAGE_peak_3_at_CTGF_5end
chr6	132270672	132270706	CAGE_peak_8_at_CTGF_5end
chr6	132270719	132270731	CAGE_peak_4_at_CTGF_5end
chr6	132271902	132271913	CAGE_peak_26_at_CTGF_5end
chr6	132271932	132271967	CAGE_peak_6_at_CTGF_5end
chr6	132271980	132271991	CAGE_peak_16_at_CTGF_5end
chr6	132271998	132272086	CAGE_peak_2_at_CTGF_5end
chr6	132272504	132272519	CAGE_peak_1_at_CTGF_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I132146	132146817	132148759	1.06	[{'connected_gene': 'CTGF', 'score': 3.83}, {'connected_gene': 'TAAR2', 'score': 2.58}, {'connected_gene': 'LINC01013', 'score': 0.37}, {'connected_gene': 'EEF1A1P36', 'score': 0.13}, {'connected_gene': 'GC06M132077', 'score': 0.11}]
chr6	GH06I131995	131995594	131996587	0.69	[{'connected_gene': 'LINC01013', 'score': 5.45}, {'connected_gene': 'CTGF', 'score': 0.26}, {'connected_gene': 'ENSG00000227220', 'score': 0.25}, {'connected_gene': 'GC06P132061', 'score': 0.2}]
chr6	GH06I131979	131979491	131983875	1.16	[{'connected_gene': 'LINC01013', 'score': 8.44}, {'connected_gene': 'ENSG00000227220', 'score': 0.29}, {'connected_gene': 'CTGF', 'score': 0.29}, {'connected_gene': 'GC06P132061', 'score': 0.18}]
chr6	GH06I131997	131997196	131998557	0.6	[{'connected_gene': 'LINC01013', 'score': 8.77}, {'connected_gene': 'ENSG00000227220', 'score': 0.25}, {'connected_gene': 'CTGF', 'score': 0.25}, {'connected_gene': 'GC06P132061', 'score': 0.21}]
chr6	GH06I132053	132053065	132055141	0.43	[{'connected_gene': 'LINC01013', 'score': 5.93}, {'connected_gene': 'GC06P132061', 'score': 0.44}, {'connected_gene': 'ENSG00000227220', 'score': 0.15}, {'connected_gene': 'CTGF', 'score': 0.15}]
chr6	GH06I131958	131958535	131959635	0.93	[{'connected_gene': 'LINC01013', 'score': 8.42}, {'connected_gene': 'ENSG00000227220', 'score': 0.44}, {'connected_gene': 'CTGF', 'score': 0.44}, {'connected_gene': 'GC06P132061', 'score': 0.15}]
chr6	GH06I132059	132059657	132065229	1.23	[{'connected_gene': 'GC06P132061', 'score': 550.77}, {'connected_gene': 'AKAP7', 'score': 4.3}, {'connected_gene': 'CTGF', 'score': 1.66}, {'connected_gene': 'ENSG00000236166', 'score': 0.34}, {'connected_gene': 'ENSG00000227220', 'score': 0.14}]
chr6	GH06I131946	131946340	131956534	2.45	[{'connected_gene': 'ENSG00000227220', 'score': 550.77}, {'connected_gene': 'CTGF', 'score': 550.77}, {'connected_gene': 'LINC01013', 'score': 6.94}, {'connected_gene': 'GC06M131950', 'score': 0.77}, {'connected_gene': 'GC06P132061', 'score': 0.14}]
chr6	GH06I131976	131976581	131977288	0.89	[{'connected_gene': 'ENSG00000227220', 'score': 11.96}, {'connected_gene': 'CTGF', 'score': 11.96}, {'connected_gene': 'LINC01013', 'score': 8.4}, {'connected_gene': 'GC06P132061', 'score': 0.18}]
chr6	GH06I131960	131960441	131960570	0.46	[{'connected_gene': 'ENSG00000227220', 'score': 0.44}, {'connected_gene': 'CTGF', 'score': 0.44}, {'connected_gene': 'GC06P132061', 'score': 0.15}]
chr6	GH06I132007	132007542	132007690	0.56	[{'connected_gene': 'GC06P132061', 'score': 0.23}, {'connected_gene': 'ENSG00000227220', 'score': 0.22}, {'connected_gene': 'CTGF', 'score': 0.22}]
chr6	GH06I131996	131996961	131997019	0.31	[{'connected_gene': 'ENSG00000227220', 'score': 0.25}, {'connected_gene': 'CTGF', 'score': 0.25}, {'connected_gene': 'GC06P132061', 'score': 0.21}]
chr6	GH06I131966	131966581	131966730	0.65	[{'connected_gene': 'ENSG00000227220', 'score': 0.37}, {'connected_gene': 'CTGF', 'score': 0.37}, {'connected_gene': 'GC06P132061', 'score': 0.16}]
chr6	GH06I132020	132020168	132021058	0.69	[{'connected_gene': 'GC06P132061', 'score': 0.26}, {'connected_gene': 'ENSG00000227220', 'score': 0.2}, {'connected_gene': 'CTGF', 'score': 0.2}]