PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000458222	[[158900585, 158900778], [158901460, 158901566], [158906680, 158906965], [158908186, 158908332], [158908869, 158908910]]	[[158906700, 158906965], [158908186, 158908332], [158908869, 158908910]]
ENST00000368140	[[158901341, 158901566], [158906680, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943561], [158946490, 158946844]]	[[158906700, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943556]]
ENST00000368138	[[158901348, 158901566], [158906680, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943561], [158946490, 158946518]]	[[158906700, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943556]]
ENST00000392254	[[158901349, 158901566], [158906680, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158946490, 158946518]]	[[158906700, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832]]
ENST00000392252	[[158901349, 158901566], [158906680, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158946490, 158946518]]	[[158906700, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832]]
ENST00000368135	[[158901357, 158901566], [158906680, 158906965], [158908186, 158908332], [158908869, 158909037], [158909192, 158910046]]	[[158906700, 158906965], [158908186, 158908332], [158908869, 158909037], [158909192, 158909351]]
ENST00000485134	[[158911766, 158912189], [158913579, 158913768], [158914664, 158915181]]	None
NM_198930	[[158901336, 158901566], [158906680, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158946490, 158946849]]	[[158906700, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158946490, 158946517]]
NM_198928	[[158901336, 158901566], [158906680, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943561], [158946490, 158946849]]	[[158906700, 158906965], [158908213, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943556]]
NM_198929	[[158901336, 158901566], [158906680, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158946490, 158946849]]	[[158906700, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158946490, 158946517]]
NM_152501	[[158901336, 158901566], [158906680, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943561], [158946490, 158946849]]	[[158906700, 158906965], [158908186, 158908332], [158908869, 158909037], [158911766, 158912189], [158913579, 158913768], [158914664, 158914832], [158943436, 158943556]]

Promoter

Chrom	Start	End	Description
chr1	158900568	158900580	CAGE_peak_4_at_PYHIN1_5end
chr1	158901312	158901319	CAGE_peak_2_at_PYHIN1_5end
chr1	158901329	158901366	CAGE_peak_1_at_PYHIN1_5end
chr1	158901412	158901423	CAGE_peak_3_at_PYHIN1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I158808	158808601	158811200	0.79	[{'connected_gene': 'OR10AA1P', 'score': 550.77}, {'connected_gene': 'MNDA', 'score': 14.81}, {'connected_gene': 'OR6N2', 'score': 11.29}, {'connected_gene': 'OR6N1', 'score': 10.41}, {'connected_gene': 'OR6K2', 'score': 9.47}, {'connected_gene': 'PYHIN1', 'score': 1.82}, {'connected_gene': 'IFI16', 'score': 1.23}]
chr1	GH01I158969	158969438	158970560	0.43	[{'connected_gene': 'OR6N2', 'score': 10.44}, {'connected_gene': 'OR6N1', 'score': 10.08}, {'connected_gene': 'OR10X1', 'score': 9.56}, {'connected_gene': 'ACKR1', 'score': 5.26}, {'connected_gene': 'PIR57461', 'score': 0.44}, {'connected_gene': 'IFI16', 'score': 0.31}, {'connected_gene': 'PYHIN1', 'score': 0.28}]
chr1	GH01I158818	158818401	158820469	1.61	[{'connected_gene': 'MNDA', 'score': 17.09}, {'connected_gene': 'CD1D', 'score': 4.5}, {'connected_gene': 'PYHIN1', 'score': 1.31}, {'connected_gene': 'IFI16', 'score': 1.21}, {'connected_gene': 'OR10AA1P', 'score': 0.39}]
chr1	GH01I158800	158800201	158804400	1	[{'connected_gene': 'MNDA', 'score': 25.29}, {'connected_gene': 'OR6N1', 'score': 11.2}, {'connected_gene': 'OR6N2', 'score': 11.09}, {'connected_gene': 'PYHIN1', 'score': 1.75}, {'connected_gene': 'IFI16', 'score': 1.35}, {'connected_gene': 'OR2AQ1P', 'score': 0.44}, {'connected_gene': 'OR10AA1P', 'score': 0.44}]
chr1	GH01I159004	159004768	159017376	2.67	[{'connected_gene': 'IFI16', 'score': 569.21}, {'connected_gene': 'OR6N2', 'score': 10.04}, {'connected_gene': 'CADM3-AS1', 'score': 9.97}, {'connected_gene': 'RAD1P2', 'score': 9.97}, {'connected_gene': 'ACKR1', 'score': 6.26}, {'connected_gene': 'AIM2', 'score': 2.44}, {'connected_gene': 'PYHIN1', 'score': 1.42}, {'connected_gene': 'GC01M159011', 'score': 0.77}]
chr1	GH01I158933	158933365	158934232	0.38	[{'connected_gene': 'ACKR1', 'score': 6.25}, {'connected_gene': 'PYHIN1', 'score': 0.77}, {'connected_gene': 'PIR57461', 'score': 0.31}]
chr1	GH01I158972	158972927	158973135	0.42	[{'connected_gene': 'FCER1A', 'score': 9.49}, {'connected_gene': 'OR6N1', 'score': 7.46}, {'connected_gene': 'OR6K3', 'score': 5.78}, {'connected_gene': 'OR10Z1', 'score': 5.33}, {'connected_gene': 'DUSP23', 'score': 4.35}, {'connected_gene': 'OR10R2', 'score': 4.02}, {'connected_gene': 'OR10X1', 'score': 3.6}, {'connected_gene': 'OR6N2', 'score': 3.56}, {'connected_gene': 'PYHIN1', 'score': 2.72}, {'connected_gene': 'OR6P1', 'score': 2.0}, {'connected_gene': 'OR10J1', 'score': 1.65}, {'connected_gene': 'PIR57461', 'score': 0.39}, {'connected_gene': 'IFI16', 'score': 0.31}]
chr1	GH01I158997	158997131	158997280	0.4	[{'connected_gene': 'PYHIN1', 'score': 4.35}, {'connected_gene': 'IFI16', 'score': 0.77}, {'connected_gene': 'PIR57461', 'score': 0.29}]
chr1	GH01I158929	158929652	158932540	1.01	[{'connected_gene': 'PYHIN1', 'score': 550.77}, {'connected_gene': 'ACKR1', 'score': 5.06}, {'connected_gene': 'PIR57461', 'score': 0.29}]
chr1	GH01I158978	158978457	158979039	0.2	[{'connected_gene': 'PIR57461', 'score': 0.37}, {'connected_gene': 'IFI16', 'score': 0.34}, {'connected_gene': 'PYHIN1', 'score': 0.25}]