PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000375670	[[31175280, 31175358], [31189314, 31189498], [31196111, 31196695]]	[[31189468, 31189498], [31196111, 31196504]]
ENST00000375671	[[31189438, 31189498], [31196111, 31196571]]	[[31189468, 31189498], [31196111, 31196504]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I032605	32605127	32605426	0.58	[{'connected_gene': 'DNMT3B', 'score': 2.38}, {'connected_gene': 'MAPRE1', 'score': 2.21}, {'connected_gene': 'PLAGL2', 'score': 1.49}, {'connected_gene': 'NOL4L', 'score': 0.34}, {'connected_gene': 'NOL4L-DT', 'score': 0.26}, {'connected_gene': 'C20orf203', 'score': 0.2}]
chr20	GH20I032566	32566585	32567892	0.86	[{'connected_gene': 'ASXL1', 'score': 27.52}, {'connected_gene': 'TM9SF4', 'score': 12.83}, {'connected_gene': 'PDRG1', 'score': 12.14}, {'connected_gene': 'CDK5RAP1', 'score': 10.62}, {'connected_gene': 'PLAGL2', 'score': 10.51}, {'connected_gene': 'POFUT1', 'score': 9.83}, {'connected_gene': 'BAK1P1', 'score': 9.82}, {'connected_gene': 'NOL4L-DT', 'score': 0.77}, {'connected_gene': 'ENSG00000233293', 'score': 0.44}, {'connected_gene': 'ENSG00000228156', 'score': 0.39}, {'connected_gene': 'NOL4L', 'score': 0.37}]
chr20	GH20I032568	32568206	32571187	1.13	[{'connected_gene': 'ASXL1', 'score': 13.35}, {'connected_gene': 'CDK5RAP1', 'score': 11.96}, {'connected_gene': 'PLAGL2', 'score': 10.51}, {'connected_gene': 'TM9SF4', 'score': 10.27}, {'connected_gene': 'NOL4L-DT', 'score': 5.78}, {'connected_gene': 'C20orf203', 'score': 4.08}, {'connected_gene': 'ENSG00000233293', 'score': 0.44}, {'connected_gene': 'ENSG00000228156', 'score': 0.39}, {'connected_gene': 'NOL4L', 'score': 0.37}]
chr20	GH20I032554	32554963	32555709	0.76	[{'connected_gene': 'ASXL1', 'score': 18.0}, {'connected_gene': 'CDK5RAP1', 'score': 14.12}, {'connected_gene': 'NOL4L-DT', 'score': 6.57}, {'connected_gene': 'ENSG00000233293', 'score': 0.44}, {'connected_gene': 'LOC105372592', 'score': 0.37}, {'connected_gene': 'NOL4L', 'score': 0.31}]
chr20	GH20I032579	32579159	32579308	0.66	[{'connected_gene': 'COMMD7', 'score': 11.15}, {'connected_gene': 'ENSG00000228156', 'score': 0.77}, {'connected_gene': 'NOL4L', 'score': 0.44}, {'connected_gene': 'NOL4L-DT', 'score': 0.39}]
chr20	GH20I032564	32564704	32565762	1.31	[{'connected_gene': 'NOL4L-DT', 'score': 550.77}, {'connected_gene': 'MAPRE1', 'score': 4.38}, {'connected_gene': 'PLAGL2', 'score': 2.27}, {'connected_gene': 'ENSG00000233293', 'score': 0.77}, {'connected_gene': 'ENSG00000228156', 'score': 0.37}, {'connected_gene': 'NOL4L', 'score': 0.37}]
chr20	GH20I032533	32533781	32545332	2.05	[{'connected_gene': 'NOL4L-DT', 'score': 6.4}, {'connected_gene': 'ENSG00000260257', 'score': 4.31}, {'connected_gene': 'ASXL1', 'score': 3.25}, {'connected_gene': 'LOC105372592', 'score': 0.77}, {'connected_gene': 'ENSG00000233293', 'score': 0.34}, {'connected_gene': 'NOL4L', 'score': 0.25}]
chr20	GH20I032565	32564021	32564426	0.76	[{'connected_gene': 'NOL4L-DT', 'score': 557.08}, {'connected_gene': 'ENSG00000233293', 'score': 0.77}, {'connected_gene': 'NOL4L', 'score': 0.34}]
chr20	GH20I032573	32573912	32576169	1.36	[{'connected_gene': 'RSL24D1P6', 'score': 17.92}, {'connected_gene': 'ASXL1', 'score': 17.52}, {'connected_gene': 'PDRG1', 'score': 12.14}, {'connected_gene': 'TM9SF4', 'score': 11.77}, {'connected_gene': 'CDK5RAP1', 'score': 11.38}, {'connected_gene': 'BAK1P1', 'score': 10.32}, {'connected_gene': 'NOL4L-DT', 'score': 7.16}, {'connected_gene': 'TSPY26P', 'score': 5.02}, {'connected_gene': 'ENSG00000228156', 'score': 0.44}, {'connected_gene': 'NOL4L', 'score': 0.39}]
chr20	GH20I032585	32585919	32586088	0.85	[{'connected_gene': 'NOL4L', 'score': 550.77}, {'connected_gene': 'ENSG00000228156', 'score': 0.77}, {'connected_gene': 'NOL4L-DT', 'score': 0.34}, {'connected_gene': 'C20orf203', 'score': 0.17}]
chr20	GH20I032586	32585699	32585908	0.84	[{'connected_gene': 'NOL4L', 'score': 550.77}, {'connected_gene': 'ENSG00000228156', 'score': 0.77}, {'connected_gene': 'NOL4L-DT', 'score': 0.34}, {'connected_gene': 'C20orf203', 'score': 0.17}]
chr20	GH20I032587	32586122	32586283	0.76	[{'connected_gene': 'NOL4L', 'score': 550.77}, {'connected_gene': 'ENSG00000228156', 'score': 0.77}, {'connected_gene': 'NOL4L-DT', 'score': 0.34}, {'connected_gene': 'C20orf203', 'score': 0.17}]
chr20	GH20I032559	32559439	32563088	1.39	[{'connected_gene': 'ENSG00000233293', 'score': 550.77}, {'connected_gene': 'ASXL1', 'score': 13.35}, {'connected_gene': 'CDK5RAP1', 'score': 11.96}, {'connected_gene': 'TM9SF4', 'score': 10.27}, {'connected_gene': 'MYLK2', 'score': 4.14}, {'connected_gene': 'NOL4L-DT', 'score': 0.77}, {'connected_gene': 'NOL4L', 'score': 0.34}]
chr20	GH20I032571	32571444	32572494	0.6	[{'connected_gene': 'ENSG00000228156', 'score': 0.44}, {'connected_gene': 'NOL4L-DT', 'score': 0.44}, {'connected_gene': 'ENSG00000233293', 'score': 0.39}, {'connected_gene': 'NOL4L', 'score': 0.39}]
chr20	GH20I032521	32521211	32530149	2.04	[{'connected_gene': 'ENSG00000233293', 'score': 13.26}, {'connected_gene': 'NOL4L', 'score': 13.2}, {'connected_gene': 'COMMD7', 'score': 11.12}, {'connected_gene': 'HCK', 'score': 9.17}, {'connected_gene': 'MAPRE1', 'score': 5.29}, {'connected_gene': 'C20orf203', 'score': 5.16}, {'connected_gene': 'NOL4L-DT', 'score': 4.92}, {'connected_gene': 'ENSG00000260257', 'score': 4.24}, {'connected_gene': 'PLAGL2', 'score': 3.67}, {'connected_gene': 'LOC105372592', 'score': 0.39}, {'connected_gene': 'GC20P032510', 'score': 0.37}]
chr20	GH20I032580	32580035	32585601	2.49	[{'connected_gene': 'ENSG00000228156', 'score': 550.77}, {'connected_gene': 'NOL4L', 'score': 550.77}, {'connected_gene': 'ENSG00000233293', 'score': 13.08}, {'connected_gene': 'COMMD7', 'score': 11.15}, {'connected_gene': 'NOL4L-DT', 'score': 7.08}, {'connected_gene': 'C20orf203', 'score': 3.38}, {'connected_gene': 'DNMT3B', 'score': 1.95}]
chr20	GH20I032516	32516351	32518727	0.97	[{'connected_gene': 'ENSG00000233293', 'score': 12.2}, {'connected_gene': 'NOL4L', 'score': 12.14}, {'connected_gene': 'NOL4L-DT', 'score': 5.94}, {'connected_gene': 'GC20P032510', 'score': 0.44}, {'connected_gene': 'LOC101929698', 'score': 0.44}, {'connected_gene': 'LOC105372592', 'score': 0.37}]
chr20	GH20I032507	32507526	32512600	1.38	[{'connected_gene': 'GC20P032510', 'score': 550.77}, {'connected_gene': 'LOC101929698', 'score': 550.77}, {'connected_gene': 'ENSG00000233293', 'score': 11.82}, {'connected_gene': 'NOL4L', 'score': 11.78}, {'connected_gene': 'ENSG00000236772', 'score': 11.68}, {'connected_gene': 'NOL4L-DT', 'score': 4.72}, {'connected_gene': 'TSPY26P', 'score': 4.37}, {'connected_gene': 'LOC105372592', 'score': 0.31}]