PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr2	110371238	110371250	CAGE_peak_7_at_SEPT10_5end
chr2	110371455	110371562	CAGE_peak_1_at_SEPT10_5end
chr2	110371664	110371675	CAGE_peak_3_at_SEPT10_5end
chr2	110371723	110371750	CAGE_peak_2_at_SEPT10_5end
chr2	110371751	110371758	CAGE_peak_6_at_SEPT10_5end
chr2	110371763	110371772	CAGE_peak_4_at_SEPT10_5end
chr2	110371777	110371787	CAGE_peak_5_at_SEPT10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I109707	109707130	109708544	0.31	[{'connected_gene': 'LIMS3', 'score': 12.69}, {'connected_gene': 'SEPT10', 'score': 4.26}, {'connected_gene': 'LOC105373545', 'score': 0.39}, {'connected_gene': 'GC02M109641', 'score': 0.39}, {'connected_gene': 'GC02M109642', 'score': 0.39}]
chr2	GH02I109596	109596974	109598133	0.46	[{'connected_gene': 'SOWAHC', 'score': 7.9}, {'connected_gene': 'SEPT10', 'score': 7.84}, {'connected_gene': 'ENSG00000230696', 'score': 0.44}, {'connected_gene': 'GC02M109583', 'score': 0.39}]
chr2	GH02I109561	109561985	109562275	0.23	[{'connected_gene': 'SOWAHC', 'score': 7.31}, {'connected_gene': 'RPL37P12', 'score': 0.44}, {'connected_gene': 'GC02M109583', 'score': 0.34}, {'connected_gene': 'SEPT10', 'score': 0.23}]
chr2	GH02I109097	109097792	109099451	0.2	[{'connected_gene': 'SH3RF3', 'score': 10.92}, {'connected_gene': 'SEPT10', 'score': 4.18}, {'connected_gene': 'LOC105373543', 'score': 0.31}, {'connected_gene': 'ENSG00000277628', 'score': 0.31}]
chr2	GH02I109605	109605716	109616717	2.45	[{'connected_gene': 'SEPT10', 'score': 565.74}, {'connected_gene': 'SOWAHC', 'score': 559.03}, {'connected_gene': 'RANBP2', 'score': 11.37}, {'connected_gene': 'SMIM37', 'score': 4.61}, {'connected_gene': 'GPAA1P2', 'score': 4.11}, {'connected_gene': 'ENSG00000230696', 'score': 0.44}]
chr2	GH02I109557	109557788	109559894	1.13	[{'connected_gene': 'SEPT10', 'score': 14.12}, {'connected_gene': 'SOWAHC', 'score': 4.76}, {'connected_gene': 'RPL37P12', 'score': 0.44}, {'connected_gene': 'GC02M109583', 'score': 0.31}]
chr2	GH02I109630	109630256	109633185	0.89	[{'connected_gene': 'SEPT10', 'score': 13.67}, {'connected_gene': 'SOWAHC', 'score': 8.77}, {'connected_gene': 'GC02P109639', 'score': 0.44}]
chr2	GH02I109647	109647566	109648354	0.76	[{'connected_gene': 'SEPT10', 'score': 7.64}, {'connected_gene': 'LOC645135', 'score': 4.32}, {'connected_gene': 'GC02M109643', 'score': 0.77}, {'connected_gene': 'ENSG00000230603', 'score': 0.37}, {'connected_gene': 'GC02M109641', 'score': 0.19}, {'connected_gene': 'GC02M109642', 'score': 0.19}]
chr2	GH02I109680	109680385	109681827	0.69	[{'connected_gene': 'SEPT10', 'score': 4.63}, {'connected_gene': 'LOC105373545', 'score': 0.39}, {'connected_gene': 'BMS1P19', 'score': 0.39}, {'connected_gene': 'GC02M109641', 'score': 0.28}, {'connected_gene': 'GC02M109642', 'score': 0.28}]
chr2	GH02I109554	109554237	109556235	0.57	[{'connected_gene': 'SEPT10', 'score': 13.65}, {'connected_gene': 'RPL37P12', 'score': 0.77}, {'connected_gene': 'GC02M109583', 'score': 0.31}]
chr2	GH02I109560	109560152	109560868	0.38	[{'connected_gene': 'SEPT10', 'score': 7.88}, {'connected_gene': 'RPL37P12', 'score': 0.44}, {'connected_gene': 'GC02M109583', 'score': 0.34}]
chr2	GH02I109516	109516484	109516633	0.81	[{'connected_gene': 'SEPT10', 'score': 5.69}, {'connected_gene': 'PIR44603', 'score': 0.37}, {'connected_gene': 'RPL37P12', 'score': 0.28}]
chr2	GH02I109513	109513585	109514949	1.29	[{'connected_gene': 'SEPT10', 'score': 9.88}, {'connected_gene': 'PIR44603', 'score': 0.37}, {'connected_gene': 'RPL37P12', 'score': 0.28}]
chr2	GH02I109546	109546224	109546373	0.78	[{'connected_gene': 'RPL37P12', 'score': 0.44}, {'connected_gene': 'PIR44603', 'score': 0.25}, {'connected_gene': 'SEPT10', 'score': 0.2}]
chr2	GH02I109562	109562544	109562693	0.46	[{'connected_gene': 'RPL37P12', 'score': 0.39}, {'connected_gene': 'GC02M109583', 'score': 0.34}, {'connected_gene': 'SEPT10', 'score': 0.23}]
chr2	GH02I109635	109635329	109639175	1.29	[{'connected_gene': 'GC02P109639', 'score': 550.77}, {'connected_gene': 'SOWAHC', 'score': 14.24}, {'connected_gene': 'SEPT10', 'score': 14.07}, {'connected_gene': 'RANBP2', 'score': 11.48}, {'connected_gene': 'RGPD6', 'score': 9.8}]
chr2	GH02I109125	109125005	109127136	0.85	[{'connected_gene': 'ENSG00000277628', 'score': 550.77}, {'connected_gene': 'SH3RF3', 'score': 8.68}, {'connected_gene': 'SEPT10', 'score': 3.84}]
chr2	GH02I109643	109643043	109646889	1.41	[{'connected_gene': 'GC02M109643', 'score': 550.77}, {'connected_gene': 'SEPT10', 'score': 9.19}, {'connected_gene': 'LOC645135', 'score': 5.02}, {'connected_gene': 'LINC01123', 'score': 4.82}, {'connected_gene': 'ENSG00000230603', 'score': 0.34}, {'connected_gene': 'GC02M109641', 'score': 0.19}, {'connected_gene': 'GC02M109642', 'score': 0.19}]
chr2	GH02I109604	109604485	109605425	0.85	[{'connected_gene': 'ENSG00000230696', 'score': 550.77}, {'connected_gene': 'SEPT10', 'score': 0.44}, {'connected_gene': 'GC02M109583', 'score': 0.34}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000356688	[[110300558, 110301901], [110303036, 110303119], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371720]]	[[110301698, 110301901], [110303036, 110303119], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371404]]
ENST00000397712	[[110300558, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371404]]
ENST00000397714	[[110300562, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371504]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371404]]
ENST00000334001	[[110301645, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350696], [110371374, 110371492]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350641]]
ENST00000437928	[[110301813, 110301901], [110302961, 110303119], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110362411, 110362510], [110371374, 110371492]]	[[110303001, 110303119], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350681]]
ENST00000545389	[[110303347, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371670]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371404]]
ENST00000415095	[[110303378, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371412]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371404]]
ENST00000486678	[[110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350696], [110371374, 110371670]]	[[110332326, 110332344], [110350627, 110350696], [110371374, 110371404]]
ENST00000425498	[[110322001, 110322111], [110323339, 110323436], [110325391, 110325553], [110350623, 110350696], [110371374, 110371498]]	[[110325509, 110325553], [110350623, 110350696], [110371374, 110371404]]
ENST00000493445	[[110322095, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110371374, 110371495]]	[[110322095, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332178]]
ENST00000423520	[[110323406, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371670]]	[[110323406, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371404]]
ENST00000461295	[[110325495, 110325553], [110332157, 110332344], [110342702, 110342898], [110371374, 110371514]]	[[110325495, 110325553], [110332157, 110332178]]
ENST00000411469	[[110343296, 110343415], [110350627, 110350696], [110370997, 110371081]]	[[110343296, 110343415], [110350627, 110350681]]
ENST00000442746	[[110343302, 110343415], [110350627, 110350696], [110370688, 110371087]]	[[110343302, 110343415], [110350627, 110350696], [110370688, 110370691]]
ENST00000468616	[[110303606, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325448]]	None
ENST00000483047	[[110321791, 110322111], [110323339, 110323436], [110325391, 110325430]]	None
NM_001321513	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110370688, 110371234]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110370688, 110370691]]
NM_001321515	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110370688, 110371234]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110370688, 110370691]]
NM_001321514	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110370997, 110371234]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350681]]
NM_001321501	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350623, 110350696], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343388]]
NM_001321509	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350623, 110350696], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343388]]
NM_001321512	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371404]]
NM_001321498	[[110300373, 110301901], [110303036, 110303119], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371783]]	[[110301698, 110301901], [110303036, 110303119], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371404]]
NM_144710	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110350627, 110350696], [110371374, 110371404]]
NM_001321507	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350696], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350641]]
NM_001321496	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350696], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110350627, 110350641]]
NM_001321499	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371404]]
NM_001321510	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110350627, 110350696], [110371374, 110371404]]
NM_001321500	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371404]]
NM_178584	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371404]]
NM_001321502	[[110300373, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371783]]	[[110303762, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110342702, 110342898], [110343297, 110343415], [110371374, 110371404]]
NM_001321504	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332178]]
NM_001321505	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332178]]
NM_001321508	[[110300373, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332344], [110371374, 110371783]]	[[110303762, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110332157, 110332178]]
NM_001321511	[[110300373, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110371374, 110371783]]	[[110303622, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110371374, 110371404]]
NM_001321506	[[110300373, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110371374, 110371783]]	[[110301885, 110301901], [110303626, 110303814], [110310663, 110310796], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110371374, 110371404]]
NM_001321503	[[110300373, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110371374, 110371783]]	[[110303762, 110303814], [110321942, 110322111], [110323339, 110323436], [110325391, 110325553], [110371374, 110371404]]