PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000433477	[[156845269, 156847222], [156849487, 156849580], [156850693, 156850857], [156858513, 156858635], [156860522, 156860690], [156863468, 156863608], [156864307, 156864416], [156874864, 156875069]]	[[156847187, 156847222], [156849487, 156849580], [156850693, 156850857], [156858513, 156858635], [156860522, 156860690], [156863468, 156863608], [156864307, 156864416], [156874864, 156874999]]
NM_001334	[[156845269, 156847222], [156849487, 156849580], [156850693, 156850857], [156858513, 156858635], [156860522, 156860690], [156863468, 156863608], [156864307, 156864416], [156874864, 156875048]]	[[156847187, 156847222], [156849487, 156849580], [156850693, 156850857], [156858513, 156858635], [156860522, 156860690], [156863468, 156863608], [156864307, 156864416], [156874864, 156874999]]

Promoter

Chrom	Start	End	Description
chr4	156875003	156875074	CAGE_peak_1_at_CTSO_5end
chr4	156875081	156875092	CAGE_peak_2_at_CTSO_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I155899	155899835	155901348	0.72	[{'connected_gene': 'TDO2', 'score': 4.81}, {'connected_gene': 'ASIC5', 'score': 0.29}, {'connected_gene': 'CTSO', 'score': 0.23}]
chr4	GH04I155903	155903647	155903706	0.9	[{'connected_gene': 'TDO2', 'score': 550.25}, {'connected_gene': 'ASIC5', 'score': 0.28}, {'connected_gene': 'CTSO', 'score': 0.23}]
chr4	GH04I155888	155888817	155890258	0.95	[{'connected_gene': 'TDO2', 'score': 5.42}, {'connected_gene': 'ASIC5', 'score': 0.34}, {'connected_gene': 'CTSO', 'score': 0.21}]
chr4	GH04I155940	155940981	155944813	0.57	[{'connected_gene': 'TDO2', 'score': 10.56}, {'connected_gene': 'CTSO', 'score': 7.57}, {'connected_gene': 'ASIC5', 'score': 0.18}]
chr4	GH04I155866	155866267	155866326	0.5	[{'connected_gene': 'ASIC5', 'score': 550.77}, {'connected_gene': 'TDO2', 'score': 0.39}, {'connected_gene': 'CTSO', 'score': 0.17}]
chr4	GH04I155906	155906536	155907718	0.76	[{'connected_gene': 'ASIC5', 'score': 0.26}, {'connected_gene': 'CTSO', 'score': 0.25}, {'connected_gene': 'TDO2', 'score': 0.23}]
chr4	GH04I155959	155959482	155961690	0.4	[{'connected_gene': 'CTSO', 'score': 11.25}, {'connected_gene': 'FTH1P21', 'score': 0.25}]
chr4	GH04I155952	155952240	155955661	2.13	[{'connected_gene': 'CTSO', 'score': 567.43}, {'connected_gene': 'FTH1P21', 'score': 0.23}]
chr4	GH04I155973	155973453	155974899	0.87	[{'connected_gene': 'CTSO', 'score': 7.04}, {'connected_gene': 'FTH1P21', 'score': 0.29}]
chr4	GH04I155965	155965118	155968769	0.4	[{'connected_gene': 'CTSO', 'score': 7.47}, {'connected_gene': 'FTH1P21', 'score': 0.28}]
chr4	GH04I156114	156114480	156116172	0.31	[{'connected_gene': 'CTSO', 'score': 4.77}, {'connected_gene': 'GC04P156132', 'score': 0.37}, {'connected_gene': 'LOC102724785', 'score': 0.31}, {'connected_gene': 'PIR40160', 'score': 0.14}]
chr4	GH04I156113	156113038	156114233	0.38	[{'connected_gene': 'CTSO', 'score': 10.69}, {'connected_gene': 'GC04P156132', 'score': 0.37}, {'connected_gene': 'LOC102724785', 'score': 0.29}, {'connected_gene': 'PIR40160', 'score': 0.14}]
chr4	GH04I156020	156020930	156021799	0.2	[{'connected_gene': 'CTSO', 'score': 11.71}, {'connected_gene': 'PIR40160', 'score': 0.39}, {'connected_gene': 'GC04P156132', 'score': 0.14}]
chr4	GH04I156100	156100087	156103345	0.2	[{'connected_gene': 'CTSO', 'score': 6.43}, {'connected_gene': 'GC04P156132', 'score': 0.29}, {'connected_gene': 'PIR40160', 'score': 0.15}]
chr4	GH04I156019	156019871	156020375	0.2	[{'connected_gene': 'CTSO', 'score': 11.79}, {'connected_gene': 'PIR40160', 'score': 0.39}, {'connected_gene': 'GC04P156132', 'score': 0.14}]
chr4	GH04I156109	156109584	156112247	0.58	[{'connected_gene': 'CTSO', 'score': 14.99}, {'connected_gene': 'GC04P156132', 'score': 0.34}, {'connected_gene': 'PIR40160', 'score': 0.15}]
chr4	GH04I156672	156672478	156674059	0.58	[{'connected_gene': 'LINC02272', 'score': 11.06}, {'connected_gene': 'ENSG00000249479', 'score': 11.06}, {'connected_gene': 'CTSO', 'score': 5.05}, {'connected_gene': 'ENSG00000248912', 'score': 0.39}, {'connected_gene': 'GC04P156646', 'score': 0.31}]