PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000514064	[[76481257, 76481359], [76481750, 76481794], [76488444, 76488532]]	None
ENST00000511093	[[76481257, 76481359], [76488419, 76488555], [76489323, 76489462], [76489597, 76489855]]	[[76481292, 76481359], [76488419, 76488475]]
ENST00000311623	[[76481257, 76481359], [76489323, 76491095]]	[[76481292, 76481359], [76489323, 76489649]]
ENST00000435974	[[76481274, 76481359], [76481750, 76481794], [76489323, 76489754]]	[[76481292, 76481359], [76481750, 76481794], [76489323, 76489743]]

Promoter

Chrom	Start	End	Description
chr4	76481268	76481289	CAGE_peak_1_at_C4orf26_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I075701	75701860	75706972	1.03	[{'connected_gene': 'G3BP2', 'score': 18.94}, {'connected_gene': 'USO1', 'score': 18.4}, {'connected_gene': 'CDKL2', 'score': 11.04}, {'connected_gene': 'ODAPH', 'score': 10.13}, {'connected_gene': 'CCDC158', 'score': 5.36}, {'connected_gene': 'GC04M075663', 'score': 0.26}, {'connected_gene': 'ENSG00000201644', 'score': 0.26}]
chr4	GH04I075707	75707955	75708846	0.76	[{'connected_gene': 'CDKL2', 'score': 10.97}, {'connected_gene': 'ODAPH', 'score': 9.89}, {'connected_gene': 'G3BP2', 'score': 7.99}, {'connected_gene': 'USO1', 'score': 4.35}, {'connected_gene': 'GC04M075663', 'score': 0.25}, {'connected_gene': 'ENSG00000201644', 'score': 0.25}]
chr4	GH04I075629	75629697	75631386	1.89	[{'connected_gene': 'CDKL2', 'score': 550.77}, {'connected_gene': 'ODAPH', 'score': 10.17}, {'connected_gene': 'G3BP2', 'score': 7.78}, {'connected_gene': 'GC04M075630', 'score': 0.77}]
chr4	GH04I075710	75710200	75710401	0.46	[{'connected_gene': 'CDKL2', 'score': 10.97}, {'connected_gene': 'ODAPH', 'score': 9.89}, {'connected_gene': 'USO1', 'score': 5.0}, {'connected_gene': 'G3BP2', 'score': 0.39}, {'connected_gene': 'GC04M075663', 'score': 0.25}, {'connected_gene': 'ENSG00000201644', 'score': 0.25}]
chr4	GH04I075573	75573389	75574013	1.03	[{'connected_gene': 'CDKL2', 'score': 10.91}, {'connected_gene': 'ODAPH', 'score': 0.37}]
chr4	GH04I075722	75722181	75727304	2.26	[{'connected_gene': 'USO1', 'score': 557.88}, {'connected_gene': 'G3BP2', 'score': 550.77}, {'connected_gene': 'CDKL2', 'score': 10.08}, {'connected_gene': 'ODAPH', 'score': 9.56}, {'connected_gene': 'GC04P075797', 'score': 0.19}]
chr4	GH04I075682	75682980	75683431	0.31	[{'connected_gene': 'USO1', 'score': 11.65}, {'connected_gene': 'G3BP2', 'score': 11.65}, {'connected_gene': 'ODAPH', 'score': 10.1}, {'connected_gene': 'GC04M075663', 'score': 0.34}, {'connected_gene': 'ENSG00000201644', 'score': 0.34}]
chr4	GH04I075542	75542015	75544062	0.46	[{'connected_gene': 'USO1', 'score': 4.6}, {'connected_gene': 'ODAPH', 'score': 0.39}, {'connected_gene': 'PIR35294', 'score': 0.37}, {'connected_gene': 'THAP6', 'score': 0.29}]
chr4	GH04I075714	75714513	75716201	0.8	[{'connected_gene': 'ODAPH', 'score': 9.56}, {'connected_gene': 'USO1', 'score': 6.43}, {'connected_gene': 'G3BP2', 'score': 4.99}, {'connected_gene': 'GC04M075663', 'score': 0.23}, {'connected_gene': 'ENSG00000201644', 'score': 0.23}]
chr4	GH04I075555	75555226	75556385	1.36	[{'connected_gene': 'ODAPH', 'score': 558.08}, {'connected_gene': 'ART3', 'score': 4.04}, {'connected_gene': 'CDKL2', 'score': 0.19}]
chr4	GH04I075561	75561300	75562560	0.69	[{'connected_gene': 'ODAPH', 'score': 16.77}, {'connected_gene': 'RCHY1', 'score': 5.63}, {'connected_gene': 'CDKL2', 'score': 0.2}]
chr4	GH04I075548	75548001	75548200	0.65	[{'connected_gene': 'ODAPH', 'score': 0.44}, {'connected_gene': 'PIR35294', 'score': 0.34}, {'connected_gene': 'THAP6', 'score': 0.28}]