PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr5	87516538	87516544	CAGE_peak_2_at_TMEM161B_5end
chr5	87564620	87564687	CAGE_peak_1_at_TMEM161B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I088822	88822470	88835034	2.18	[{'connected_gene': 'MEF2C', 'score': 552.33}, {'connected_gene': 'TMEM161B', 'score': 17.86}, {'connected_gene': 'MEF2C-AS1', 'score': 10.8}, {'connected_gene': 'ENSG00000250377', 'score': 0.12}]
chr5	GH05I088140	88140524	88142200	1.11	[{'connected_gene': 'TMEM161B', 'score': 12.76}, {'connected_gene': 'LINC00461', 'score': 11.24}, {'connected_gene': 'MEF2C-AS2', 'score': 11.24}, {'connected_gene': 'MIR9-2', 'score': 10.3}, {'connected_gene': 'ENSG00000250555', 'score': 10.23}, {'connected_gene': 'ENSG00000250377', 'score': 10.23}, {'connected_gene': 'LOC105379070', 'score': 0.26}, {'connected_gene': 'GC05P088219', 'score': 0.18}]
chr5	GH05I088657	88657788	88658917	0.49	[{'connected_gene': 'TMEM161B', 'score': 13.35}, {'connected_gene': 'LINC00461', 'score': 11.68}, {'connected_gene': 'ENSG00000250555', 'score': 11.22}, {'connected_gene': 'ENSG00000250377', 'score': 11.2}, {'connected_gene': 'GC05P088664', 'score': 0.44}, {'connected_gene': 'ENSG00000250705', 'score': 0.22}]
chr5	GH05I088679	88679245	88681097	1.28	[{'connected_gene': 'TMEM161B', 'score': 17.88}, {'connected_gene': 'MEF2C-AS2', 'score': 0.77}, {'connected_gene': 'LINC00461', 'score': 0.39}]
chr5	GH05I088807	88807347	88807995	0.54	[{'connected_gene': 'TMEM161B', 'score': 17.86}, {'connected_gene': 'MEF2C-AS1', 'score': 0.18}, {'connected_gene': 'MEF2C', 'score': 0.15}, {'connected_gene': 'ENSG00000250377', 'score': 0.14}]
chr5	GH05I088671	88671431	88678433	1.63	[{'connected_gene': 'MEF2C-AS2', 'score': 550.77}, {'connected_gene': 'TMEM161B', 'score': 28.66}, {'connected_gene': 'MEF2C', 'score': 6.14}, {'connected_gene': 'MEF2C-AS1', 'score': 4.18}, {'connected_gene': 'MIR9-2', 'score': 0.44}, {'connected_gene': 'LINC00461', 'score': 0.37}]
chr5	GH05I088194	88194974	88198019	0.2	[{'connected_gene': 'TMEM161B-AS1', 'score': 8.81}, {'connected_gene': 'ENSG00000271904', 'score': 7.38}, {'connected_gene': 'GC05P088219', 'score': 0.34}, {'connected_gene': 'TMEM161B', 'score': 0.19}, {'connected_gene': 'LOC105379070', 'score': 0.15}]
chr5	GH05I088247	88247408	88248054	0.38	[{'connected_gene': 'TMEM161B-AS1', 'score': 10.57}, {'connected_gene': 'GC05M088257', 'score': 0.39}, {'connected_gene': 'TMEM161B', 'score': 0.34}, {'connected_gene': 'GC05P088219', 'score': 0.31}]
chr5	GH05I088267	88267396	88270451	2.03	[{'connected_gene': 'TMEM161B-AS1', 'score': 560.85}, {'connected_gene': 'TMEM161B', 'score': 550.77}]
chr5	GH05I088256	88256354	88257700	0.85	[{'connected_gene': 'TMEM161B-AS1', 'score': 10.47}, {'connected_gene': 'GC05M088257', 'score': 0.77}, {'connected_gene': 'TMEM161B', 'score': 0.39}, {'connected_gene': 'GC05P088219', 'score': 0.28}]
chr5	GH05I088244	88244411	88245452	0.79	[{'connected_gene': 'TMEM161B-AS1', 'score': 10.1}, {'connected_gene': 'GC05M088257', 'score': 0.39}, {'connected_gene': 'TMEM161B', 'score': 0.34}, {'connected_gene': 'GC05P088219', 'score': 0.31}]
chr5	GH05I088251	88251184	88251313	0.78	[{'connected_gene': 'TMEM161B-AS1', 'score': 9.71}, {'connected_gene': 'GC05M088257', 'score': 0.44}, {'connected_gene': 'TMEM161B', 'score': 0.37}, {'connected_gene': 'GC05P088219', 'score': 0.29}]
chr5	GH05I088191	88190564	88190573	0.46	[{'connected_gene': 'GC05P088219', 'score': 0.31}, {'connected_gene': 'TMEM161B', 'score': 0.18}, {'connected_gene': 'LOC105379070', 'score': 0.16}]
chr5	GH05I088203	88203816	88205284	0.43	[{'connected_gene': 'ENSG00000271904', 'score': 7.39}, {'connected_gene': 'GC05P088219', 'score': 0.39}, {'connected_gene': 'TMEM161B', 'score': 0.21}, {'connected_gene': 'LOC105379070', 'score': 0.15}]
chr5	GH05I088190	88190264	88190413	0.64	[{'connected_gene': 'GC05P088219', 'score': 0.31}, {'connected_gene': 'TMEM161B', 'score': 0.18}, {'connected_gene': 'LOC105379070', 'score': 0.16}]
chr5	GH05I088248	88248914	88249465	0.31	[{'connected_gene': 'GC05M088257', 'score': 0.39}, {'connected_gene': 'TMEM161B', 'score': 0.34}, {'connected_gene': 'GC05P088219', 'score': 0.29}]
chr5	GH05I088234	88234925	88235300	0.22	[{'connected_gene': 'GC05P088219', 'score': 0.37}, {'connected_gene': 'GC05M088257', 'score': 0.34}, {'connected_gene': 'TMEM161B', 'score': 0.29}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000514135	[[87485449, 87486078], [87492192, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564647]]	[[87485868, 87486078], [87492192, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564540]]
ENST00000511087	[[87490863, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501617, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87517490, 87517577], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564616]]	[[87517500, 87517577], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564540]]
ENST00000510089	[[87490985, 87492305], [87493485, 87498892], [87501570, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87564537, 87564665]]	[[87501626, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516444]]
ENST00000296595	[[87491022, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564665]]	[[87492027, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564540]]
ENST00000506536	[[87491023, 87492305], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502959], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87564537, 87564639]]	[[87492194, 87492305], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502897]]
ENST00000512429	[[87491933, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87555048, 87555180], [87564537, 87564646]]	[[87492027, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536703]]
ENST00000507872	[[87498500, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502959], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564636]]	[[87502943, 87502959], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564540]]
ENST00000509387	[[87498759, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87564537, 87564674]]	[[87498774, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516444]]
ENST00000503755	[[87502236, 87502316], [87502845, 87502997], [87516379, 87516536], [87524261, 87524345], [87564537, 87564646]]	None
ENST00000513487	[[87502851, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87564604, 87564665]]	None
ENST00000515477	[[87516431, 87516536], [87517117, 87517288], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564664]]	None
ENST00000503194	[[87524275, 87524345], [87536629, 87536733], [87564604, 87564887], [87565180, 87565293]]	None
ENST00000511218	[[87491644, 87492305], [87493485, 87493582], [87494792, 87494886], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502959], [87516379, 87516448]]	[[87492027, 87492305], [87493485, 87493582], [87494792, 87494886], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502897]]
ENST00000515293	[[87492166, 87492305], [87493485, 87494268]]	None
ENST00000503943	[[87524257, 87524345], [87536629, 87536733], [87546467, 87546854]]	None
NM_001289007	[[87485449, 87486078], [87492192, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564696]]	[[87485868, 87486078], [87492192, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564540]]
NM_001289008	[[87491022, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87555048, 87555180], [87564537, 87564696]]	[[87492027, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536703]]
NR_110266	[[87491022, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501617, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87517490, 87517577], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564696]]	None
NM_153354	[[87491022, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564696]]	[[87492027, 87492305], [87493485, 87493582], [87494792, 87494967], [87498778, 87498892], [87501630, 87501771], [87502255, 87502316], [87502845, 87502997], [87516379, 87516536], [87521585, 87521683], [87524261, 87524345], [87536629, 87536733], [87564537, 87564540]]