PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000308595	[[67033880, 67034283], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048254], [67048563, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051420], [67051681, 67051844], [67052317, 67052454], [67052545, 67052659], [67052756, 67054027]]	[[67034170, 67034283], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048254], [67048563, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051420], [67051681, 67051844], [67052317, 67052454], [67052545, 67052659], [67052756, 67052921]]
ENST00000526285	[[67033951, 67034283], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048254], [67048563, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67049948], [67053863, 67054007]]	[[67034170, 67034283], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048254], [67048563, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67049948], [67053863, 67053995]]
ENST00000530291	[[67038408, 67038479], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990]]	None
ENST00000416281	[[67044007, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051420], [67051681, 67051844], [67052317, 67052454], [67052545, 67052659], [67052756, 67054026]]	None
ENST00000529738	[[67046944, 67046990], [67047096, 67047171], [67047309, 67047371], [67053526, 67053843]]	None
ENST00000533077	[[67047664, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67050013], [67050222, 67050289], [67050598, 67052093]]	None
ENST00000534651	[[67048929, 67049029], [67049120, 67049199], [67049292, 67049537]]	None
ENST00000532099	[[67048979, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67050013], [67050222, 67050289], [67050598, 67050699], [67051324, 67051420], [67051681, 67051840]]	None
ENST00000526572	[[67049154, 67049199], [67049292, 67049423], [67049741, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051430]]	None
ENST00000527176	[[67049346, 67049423], [67049905, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051420], [67051681, 67051844], [67052317, 67052608]]	None
ENST00000529815	[[67049595, 67050013], [67050222, 67050289], [67050598, 67050702]]	None
ENST00000531390	[[67050251, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051642]]	None
ENST00000532611	[[67050645, 67050699], [67051177, 67051420], [67051681, 67051794]]	None
ENST00000524899	[[67051741, 67051844], [67052317, 67052659], [67052756, 67053062]]	None
NM_001619	[[67033904, 67034283], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048254], [67048563, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051420], [67051681, 67051844], [67052317, 67052454], [67052545, 67052659], [67052756, 67054029]]	[[67034170, 67034283], [67044742, 67044819], [67046670, 67046744], [67046888, 67046990], [67047096, 67047171], [67047309, 67047371], [67048202, 67048254], [67048563, 67048655], [67048929, 67049029], [67049120, 67049199], [67049292, 67049423], [67049741, 67049836], [67049905, 67050013], [67050222, 67050289], [67050598, 67050699], [67051177, 67051244], [67051324, 67051420], [67051681, 67051844], [67052317, 67052454], [67052545, 67052659], [67052756, 67052921]]

Promoter

Chrom	Start	End	Description
chr11	67033909	67033950	CAGE_peak_1_at_ADRBK1_5end
chr11	67034140	67034180	CAGE_peak_2_at_ADRBK1_5end
chr11	67049422	67049427	CAGE_peak_4_at_ADRBK1_5end
chr11	67050220	67050224	CAGE_peak_5_at_ADRBK1_5end
chr11	67051186	67051245	CAGE_peak_3_at_ADRBK1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I066949	66949546	66953828	1.69	[{'connected_gene': 'ACTN3', 'score': 16.85}, {'connected_gene': 'ENSG00000258297', 'score': 13.0}, {'connected_gene': 'SYT12', 'score': 11.65}, {'connected_gene': 'RBM14', 'score': 10.34}, {'connected_gene': 'ENSG00000254461', 'score': 10.09}, {'connected_gene': 'RHOD', 'score': 7.03}, {'connected_gene': 'RPS6KB2', 'score': 6.19}, {'connected_gene': 'LOC101928069', 'score': 5.58}, {'connected_gene': 'CLCF1', 'score': 4.8}, {'connected_gene': 'GRK2', 'score': 2.91}, {'connected_gene': 'LOC105369355', 'score': 0.77}, {'connected_gene': 'PC', 'score': 0.44}, {'connected_gene': 'MIR3163', 'score': 0.37}]
chr11	GH11I067077	67077083	67079599	1.54	[{'connected_gene': 'RHOD', 'score': 18.58}, {'connected_gene': 'KDM2A', 'score': 14.67}, {'connected_gene': 'ANKRD13D', 'score': 12.52}, {'connected_gene': 'CDK2AP2', 'score': 4.25}, {'connected_gene': 'GRK2', 'score': 3.7}, {'connected_gene': 'RBM4', 'score': 1.79}, {'connected_gene': 'CLCF1', 'score': 1.76}, {'connected_gene': 'SSH3', 'score': 1.63}, {'connected_gene': 'TMEM134', 'score': 1.43}, {'connected_gene': 'PITPNM1', 'score': 1.1}, {'connected_gene': 'GC11P067094', 'score': 0.37}]
chr11	GH11I067233	67233947	67234921	0.43	[{'connected_gene': 'RHOD', 'score': 17.69}, {'connected_gene': 'GRK2', 'score': 12.14}, {'connected_gene': 'ANKRD13D', 'score': 11.69}, {'connected_gene': 'SSH3', 'score': 11.66}, {'connected_gene': 'PIR48284', 'score': 0.77}, {'connected_gene': 'PIR44214', 'score': 0.39}, {'connected_gene': 'KDM2A', 'score': 0.13}]
chr11	GH11I066965	66965661	66972443	1.69	[{'connected_gene': 'CLCF1', 'score': 17.27}, {'connected_gene': 'RAD9A', 'score': 14.17}, {'connected_gene': 'PC', 'score': 13.58}, {'connected_gene': 'RNU7-23P', 'score': 10.92}, {'connected_gene': 'CTSF', 'score': 6.72}, {'connected_gene': 'SPTBN2', 'score': 5.82}, {'connected_gene': 'GRK2', 'score': 2.58}, {'connected_gene': 'KDM2A', 'score': 1.66}, {'connected_gene': 'POLD4', 'score': 1.33}, {'connected_gene': 'C11orf86', 'score': 0.44}, {'connected_gene': 'LOC105369355', 'score': 0.39}]
chr11	GH11I067265	67265720	67291208	2.6	[{'connected_gene': 'GRK2', 'score': 563.68}, {'connected_gene': 'ANKRD13D', 'score': 562.59}, {'connected_gene': 'SSH3', 'score': 14.94}, {'connected_gene': 'KDM2A', 'score': 13.24}, {'connected_gene': 'PTPRCAP', 'score': 11.31}, {'connected_gene': 'RHOD', 'score': 8.24}, {'connected_gene': 'CARNS1', 'score': 7.45}, {'connected_gene': 'C11orf80', 'score': 7.27}, {'connected_gene': 'PC', 'score': 6.98}, {'connected_gene': 'RAD9A', 'score': 5.91}, {'connected_gene': 'PITPNM1', 'score': 5.14}, {'connected_gene': 'LOC102724064', 'score': 4.58}, {'connected_gene': 'CTSF', 'score': 4.02}, {'connected_gene': 'TBC1D10C', 'score': 3.53}]
chr11	GH11I067264	67264994	67265080	0.43	[{'connected_gene': 'GRK2', 'score': 550.77}, {'connected_gene': 'PIR33652', 'score': 550.77}]
chr11	GH11I067316	67316428	67318713	1.56	[{'connected_gene': 'LOC100130987', 'score': 550.77}, {'connected_gene': 'RAD9A', 'score': 550.77}, {'connected_gene': 'SSH3', 'score': 21.83}, {'connected_gene': 'ENSG00000258297', 'score': 17.15}, {'connected_gene': 'RBM4', 'score': 14.28}, {'connected_gene': 'KMT5B', 'score': 13.82}, {'connected_gene': 'RBM14', 'score': 13.16}, {'connected_gene': 'GRK2', 'score': 12.77}, {'connected_gene': 'UNC93B1', 'score': 12.57}, {'connected_gene': 'POLD4', 'score': 12.37}, {'connected_gene': 'RN7SKP239', 'score': 12.36}, {'connected_gene': 'CLCF1', 'score': 12.32}, {'connected_gene': 'ENSG00000256514', 'score': 12.32}, {'connected_gene': 'CORO1B', 'score': 12.03}, {'connected_gene': 'RNU6-1238P', 'score': 11.74}, {'connected_gene': 'TBC1D10C', 'score': 11.72}, {'connected_gene': 'CARNS1', 'score': 11.71}, {'connected_gene': 'PPP1CA', 'score': 11.7}, {'connected_gene': 'KDM2A', 'score': 11.22}, {'connected_gene': 'MRPL11', 'score': 10.47}, {'connected_gene': 'RHOD', 'score': 6.58}]