PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371204	[[60358979, 60359501], [60366636, 60366775], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392462]]	[[60359322, 60359501], [60366636, 60366775], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392418]]
ENST00000492633	[[60358987, 60359501], [60366636, 60366775], [60370037, 60370188], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60378910]]	None
ENST00000466095	[[60358991, 60359501], [60366636, 60366775], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392433]]	None
ENST00000469406	[[60358991, 60359501], [60366636, 60366775], [60370037, 60370188], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392433]]	None
ENST00000468257	[[60375582, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392192, 60392427]]	None
NR_134982	[[60358979, 60359501], [60366636, 60366775], [60370037, 60370188], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392470]]	None
NM_000775	[[60358979, 60359501], [60366636, 60366775], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392470]]	[[60359322, 60359501], [60366636, 60366775], [60370542, 60370730], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392418]]
NR_134981	[[60358979, 60359501], [60366636, 60366775], [60373457, 60373599], [60375455, 60375632], [60377279, 60377440], [60377833, 60377983], [60381609, 60381772], [60392208, 60392470]]	None

Promoter

Chrom	Start	End	Description
chr1	60392397	60392451	CAGE_peak_1_at_CYP2J2_5end
chr1	60392452	60392499	CAGE_peak_2_at_CYP2J2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I059541	59541361	59545949	1.11	[{'connected_gene': 'FGGY', 'score': 10.22}, {'connected_gene': 'CYP2J2', 'score': 2.38}, {'connected_gene': 'GC01P059473', 'score': 0.19}, {'connected_gene': 'MIR4711', 'score': 0.09}]
chr1	GH01I059906	59906767	59907951	0.38	[{'connected_gene': 'HOOK1', 'score': 14.45}, {'connected_gene': 'GC01P059903', 'score': 0.77}, {'connected_gene': 'CYP2J2', 'score': 0.37}]
chr1	GH01I059621	59621457	59621475	0.23	[{'connected_gene': 'CYP2J2', 'score': 1.7}, {'connected_gene': 'MIR4711', 'score': 0.14}, {'connected_gene': 'GC01P059473', 'score': 0.11}, {'connected_gene': 'FGGY', 'score': 0.05}]
chr1	GH01I059891	59891590	59894380	0.49	[{'connected_gene': 'CYP2J2', 'score': 12.08}, {'connected_gene': 'GC01M059897', 'score': 0.44}, {'connected_gene': 'GC01P059852', 'score': 0.26}]
chr1	GH01I059920	59920388	59923258	0.54	[{'connected_gene': 'CYP2J2', 'score': 7.01}, {'connected_gene': 'GC01P059903', 'score': 0.37}]
chr1	GH01I059926	59926180	59927398	1.84	[{'connected_gene': 'CYP2J2', 'score': 556.32}, {'connected_gene': 'GC01P059903', 'score': 0.34}]
chr1	GH01I059966	59966786	59967838	0.99	[{'connected_gene': 'C1orf87', 'score': 10.18}, {'connected_gene': 'CYP2J2', 'score': 5.27}, {'connected_gene': 'HOOK1', 'score': 4.53}, {'connected_gene': 'RN7SL475P', 'score': 0.44}, {'connected_gene': 'GC01M059975', 'score': 0.44}]
chr1	GH01I059971	59971266	59973546	0.92	[{'connected_gene': 'RN7SL475P', 'score': 0.77}, {'connected_gene': 'GC01M059975', 'score': 0.77}, {'connected_gene': 'CYP2J2', 'score': 0.25}]