PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000330560	[[25316512, 25316989], [25317755, 25317816], [25317899, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365436]]	[[25317755, 25317816], [25317899, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365254]]
ENST00000518225	[[25316714, 25316989], [25317899, 25318070], [25319569, 25319587]]	None
ENST00000380665	[[25316714, 25316989], [25317755, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365389]]	[[25317883, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365254]]
ENST00000523454	[[25325786, 25325929], [25327411, 25327496], [25329628, 25329700], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343351]]	None
ENST00000521098	[[25337207, 25337229], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365389]]	None
NM_152562	[[25316446, 25316989], [25317755, 25317816], [25317899, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365433]]	[[25317755, 25317816], [25317899, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365254]]
NM_001317907	[[25316446, 25316989], [25317755, 25317816], [25317899, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361079], [25364025, 25365433]]	[[25317755, 25317816], [25317899, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361079], [25364025, 25364071]]
NM_001317906	[[25316446, 25316989], [25317755, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365433]]	[[25317883, 25318070], [25319569, 25319724], [25323690, 25323841], [25325732, 25325929], [25327411, 25327496], [25337428, 25337640], [25340914, 25341002], [25341481, 25341726], [25343274, 25343353], [25344761, 25344850], [25346067, 25346205], [25360888, 25361060], [25364025, 25365254]]

Promoter

Chrom	Start	End	Description
chr8	25316489	25316544	CAGE_peak_3_at_CDCA2_5end
chr8	25316707	25316729	CAGE_peak_2_at_CDCA2_5end
chr8	25316737	25316787	CAGE_peak_1_at_CDCA2_5end
chr8	25337208	25337219	CAGE_peak_5_at_CDCA2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I025236	25236806	25240149	1.48	[{'connected_gene': 'DOCK5', 'score': 37.6}, {'connected_gene': 'KCTD9', 'score': 10.14}, {'connected_gene': 'CDCA2', 'score': 10.13}, {'connected_gene': 'GC08M025303', 'score': 0.2}]
chr8	GH08I025271	25271745	25271954	0.58	[{'connected_gene': 'DOCK5', 'score': 11.52}, {'connected_gene': 'GNRH1', 'score': 10.92}, {'connected_gene': 'CDCA2', 'score': 9.4}, {'connected_gene': 'KCTD9', 'score': 9.4}, {'connected_gene': 'GC08M025303', 'score': 0.29}]
chr8	GH08I025202	25202921	25203975	0.78	[{'connected_gene': 'DOCK5', 'score': 14.9}, {'connected_gene': 'CDCA2', 'score': 9.94}, {'connected_gene': 'KCTD9', 'score': 9.94}, {'connected_gene': 'GC08M025303', 'score': 0.15}]
chr8	GH08I025234	25234602	25235999	0.78	[{'connected_gene': 'DOCK5', 'score': 11.71}, {'connected_gene': 'CDCA2', 'score': 9.8}, {'connected_gene': 'KCTD9', 'score': 9.8}, {'connected_gene': 'GC08M025303', 'score': 0.19}]
chr8	GH08I025247	25247745	25249068	0.66	[{'connected_gene': 'DOCK5', 'score': 11.84}, {'connected_gene': 'CDCA2', 'score': 9.59}, {'connected_gene': 'KCTD9', 'score': 9.59}, {'connected_gene': 'GC08M025303', 'score': 0.22}]
chr8	GH08I025251	25251526	25253286	0.74	[{'connected_gene': 'DOCK5', 'score': 18.72}, {'connected_gene': 'CDCA2', 'score': 9.6}, {'connected_gene': 'KCTD9', 'score': 9.6}, {'connected_gene': 'GC08M025303', 'score': 0.23}]
chr8	GH08I025245	25245683	25247213	0.31	[{'connected_gene': 'DOCK5', 'score': 16.46}, {'connected_gene': 'CDCA2', 'score': 9.74}, {'connected_gene': 'KCTD9', 'score': 9.74}, {'connected_gene': 'GC08M025303', 'score': 0.22}]
chr8	GH08I025235	25234001	25234200	0.51	[{'connected_gene': 'DOCK5', 'score': 11.73}, {'connected_gene': 'CDCA2', 'score': 9.8}, {'connected_gene': 'KCTD9', 'score': 9.8}, {'connected_gene': 'GC08M025303', 'score': 0.19}]
chr8	GH08I025183	25183172	25189913	2.19	[{'connected_gene': 'DOCK5', 'score': 566.18}, {'connected_gene': 'CDCA2', 'score': 10.56}, {'connected_gene': 'KCTD9', 'score': 10.56}, {'connected_gene': 'GC08M025303', 'score': 0.13}]
chr8	GH08I025205	25205585	25205734	1	[{'connected_gene': 'DOCK5', 'score': 12.59}, {'connected_gene': 'CDCA2', 'score': 9.94}, {'connected_gene': 'KCTD9', 'score': 9.94}, {'connected_gene': 'GC08M025303', 'score': 0.15}]
chr8	GH08I025231	25231957	25233825	0.68	[{'connected_gene': 'DOCK5', 'score': 12.47}, {'connected_gene': 'CDCA2', 'score': 10.07}, {'connected_gene': 'KCTD9', 'score': 10.07}, {'connected_gene': 'GC08M025303', 'score': 0.19}]
chr8	GH08I025392	25392423	25393716	0.95	[{'connected_gene': 'KCTD9', 'score': 19.08}, {'connected_gene': 'GNRH1', 'score': 12.63}, {'connected_gene': 'CDCA2', 'score': 10.8}, {'connected_gene': 'PIR37075', 'score': 0.39}, {'connected_gene': 'GC08P025414', 'score': 0.34}, {'connected_gene': 'GC08M025389', 'score': 0.26}, {'connected_gene': 'DOCK5', 'score': 0.08}]
chr8	GH08I025453	25453902	25460574	2.3	[{'connected_gene': 'KCTD9', 'score': 560.82}, {'connected_gene': 'CDCA2', 'score': 550.77}, {'connected_gene': 'GNRH1', 'score': 22.58}, {'connected_gene': 'ENSG00000253476', 'score': 11.5}, {'connected_gene': 'NEFM', 'score': 4.38}, {'connected_gene': 'GC08P025445', 'score': 0.39}]
chr8	GH08I025517	25517440	25519013	0.46	[{'connected_gene': 'KCTD9', 'score': 17.24}, {'connected_gene': 'CDCA2', 'score': 10.08}, {'connected_gene': 'GC08P025504', 'score': 0.39}, {'connected_gene': 'GC08P025588', 'score': 0.19}]
chr8	GH08I025506	25506801	25507800	0.51	[{'connected_gene': 'KCTD9', 'score': 17.16}, {'connected_gene': 'CDCA2', 'score': 10.39}, {'connected_gene': 'GC08P025504', 'score': 0.77}, {'connected_gene': 'GC08P025588', 'score': 0.18}]
chr8	GH08I025478	25478104	25483153	0.95	[{'connected_gene': 'KCTD9', 'score': 21.62}, {'connected_gene': 'CDCA2', 'score': 12.02}, {'connected_gene': 'GC08P025504', 'score': 0.34}]
chr8	GH08I025490	25490619	25490967	0.22	[{'connected_gene': 'KCTD9', 'score': 19.63}, {'connected_gene': 'CDCA2', 'score': 13.61}, {'connected_gene': 'GC08P025504', 'score': 0.39}]
chr8	GH08I025367	25365064	25365951	0.31	[{'connected_gene': 'GNRH1', 'score': 11.29}, {'connected_gene': 'CDCA2', 'score': 10.48}, {'connected_gene': 'KCTD9', 'score': 10.48}, {'connected_gene': 'DOCK5', 'score': 5.56}, {'connected_gene': 'LOC105379331', 'score': 0.77}, {'connected_gene': 'PIR37075', 'score': 0.39}]
chr8	GH08I025370	25370482	25371082	0.31	[{'connected_gene': 'GNRH1', 'score': 11.44}, {'connected_gene': 'CDCA2', 'score': 10.93}, {'connected_gene': 'KCTD9', 'score': 10.93}, {'connected_gene': 'DOCK5', 'score': 6.46}, {'connected_gene': 'PIR37075', 'score': 0.44}, {'connected_gene': 'LOC105379331', 'score': 0.44}]
chr8	GH08I025366	25366934	25367455	0.31	[{'connected_gene': 'GNRH1', 'score': 11.43}, {'connected_gene': 'CDCA2', 'score': 10.92}, {'connected_gene': 'KCTD9', 'score': 10.92}, {'connected_gene': 'DOCK5', 'score': 5.44}, {'connected_gene': 'LOC105379331', 'score': 0.44}, {'connected_gene': 'PIR37075', 'score': 0.39}]
chr8	GH08I025369	25369296	25370379	0.2	[{'connected_gene': 'GNRH1', 'score': 11.43}, {'connected_gene': 'CDCA2', 'score': 10.93}, {'connected_gene': 'KCTD9', 'score': 10.93}, {'connected_gene': 'DOCK5', 'score': 6.39}, {'connected_gene': 'PIR37075', 'score': 0.44}, {'connected_gene': 'LOC105379331', 'score': 0.44}]
chr8	GH08I025368	25367835	25368407	0.63	[{'connected_gene': 'GNRH1', 'score': 16.64}, {'connected_gene': 'CDCA2', 'score': 10.92}, {'connected_gene': 'KCTD9', 'score': 10.92}, {'connected_gene': 'DOCK5', 'score': 4.52}, {'connected_gene': 'LOC105379331', 'score': 0.44}, {'connected_gene': 'PIR37075', 'score': 0.39}]
chr8	GH08I025318	25318100	25321049	1.23	[{'connected_gene': 'GNRH1', 'score': 11.24}, {'connected_gene': 'CDCA2', 'score': 10.37}, {'connected_gene': 'KCTD9', 'score': 10.37}, {'connected_gene': 'GC08M025315', 'score': 0.77}, {'connected_gene': 'GC08M025303', 'score': 0.39}, {'connected_gene': 'DOCK5', 'score': 0.12}]
chr8	GH08I025390	25390941	25391655	0.31	[{'connected_gene': 'GNRH1', 'score': 12.63}, {'connected_gene': 'CDCA2', 'score': 10.8}, {'connected_gene': 'KCTD9', 'score': 10.8}, {'connected_gene': 'NEFM', 'score': 4.35}, {'connected_gene': 'PIR37075', 'score': 0.39}, {'connected_gene': 'GC08P025414', 'score': 0.34}, {'connected_gene': 'GC08M025389', 'score': 0.26}, {'connected_gene': 'DOCK5', 'score': 0.08}]
chr8	GH08I025365	25365981	25366562	0.49	[{'connected_gene': 'GNRH1', 'score': 11.29}, {'connected_gene': 'CDCA2', 'score': 10.48}, {'connected_gene': 'KCTD9', 'score': 10.48}, {'connected_gene': 'LOC105379331', 'score': 0.77}, {'connected_gene': 'PIR37075', 'score': 0.39}, {'connected_gene': 'DOCK5', 'score': 0.09}]
chr8	GH08I025328	25328625	25328774	0.58	[{'connected_gene': 'GNRH1', 'score': 11.53}, {'connected_gene': 'CDCA2', 'score': 10.18}, {'connected_gene': 'KCTD9', 'score': 10.18}, {'connected_gene': 'GC08M025315', 'score': 0.44}, {'connected_gene': 'MIR6876', 'score': 0.37}, {'connected_gene': 'DOCK5', 'score': 0.11}]
chr8	GH08I025329	25328305	25328454	0.4	[{'connected_gene': 'GNRH1', 'score': 11.53}, {'connected_gene': 'CDCA2', 'score': 10.17}, {'connected_gene': 'KCTD9', 'score': 10.17}, {'connected_gene': 'GC08M025315', 'score': 0.44}, {'connected_gene': 'MIR6876', 'score': 0.37}, {'connected_gene': 'DOCK5', 'score': 0.11}]
chr8	GH08I025461	25461401	25461600	0.2	[{'connected_gene': 'GNRH1', 'score': 10.16}, {'connected_gene': 'CDCA2', 'score': 0.77}, {'connected_gene': 'GC08P025445', 'score': 0.37}, {'connected_gene': 'GC08P025504', 'score': 0.26}]
chr8	GH08I025363	25363614	25364099	0.31	[{'connected_gene': 'CDCA2', 'score': 10.36}, {'connected_gene': 'KCTD9', 'score': 10.36}, {'connected_gene': 'DOCK5', 'score': 4.79}, {'connected_gene': 'LOC105379331', 'score': 0.77}, {'connected_gene': 'PIR37075', 'score': 0.39}]
chr8	GH08I025170	25170001	25170649	1.06	[{'connected_gene': 'CDCA2', 'score': 10.77}, {'connected_gene': 'KCTD9', 'score': 10.77}, {'connected_gene': 'DOCK5', 'score': 8.99}, {'connected_gene': 'GC08M025181', 'score': 0.39}, {'connected_gene': 'LOC100421161', 'score': 0.31}]
chr8	GH08I025174	25174152	25176824	1	[{'connected_gene': 'CDCA2', 'score': 10.21}, {'connected_gene': 'KCTD9', 'score': 10.21}, {'connected_gene': 'GC08M025181', 'score': 0.44}, {'connected_gene': 'LOC100421161', 'score': 0.29}]
chr8	GH08I025514	25514837	25516474	0.52	[{'connected_gene': 'CDCA2', 'score': 10.08}, {'connected_gene': 'KCTD9', 'score': 10.08}, {'connected_gene': 'GC08P025504', 'score': 0.39}, {'connected_gene': 'GC08P025588', 'score': 0.19}]
chr8	GH08I025508	25508792	25509389	0.72	[{'connected_gene': 'CDCA2', 'score': 10.38}, {'connected_gene': 'KCTD9', 'score': 10.38}, {'connected_gene': 'GC08P025504', 'score': 0.77}, {'connected_gene': 'GC08P025588', 'score': 0.18}]
chr8	GH08I025475	25475765	25475914	0.46	[{'connected_gene': 'CDCA2', 'score': 0.37}, {'connected_gene': 'GC08P025504', 'score': 0.31}]
chr8	GH08I025362	25362657	25363554	0.31	[{'connected_gene': 'LOC105379331', 'score': 550.77}, {'connected_gene': 'CDCA2', 'score': 10.35}, {'connected_gene': 'KCTD9', 'score': 10.35}, {'connected_gene': 'PIR37075', 'score': 0.37}, {'connected_gene': 'DOCK5', 'score': 0.1}]
chr8	GH08I025361	25361463	25362510	0.2	[{'connected_gene': 'LOC105379331', 'score': 550.77}, {'connected_gene': 'CDCA2', 'score': 10.35}, {'connected_gene': 'KCTD9', 'score': 10.35}, {'connected_gene': 'PIR37075', 'score': 0.37}, {'connected_gene': 'DOCK5', 'score': 0.1}]
chr8	GH08I025360	25360813	25361423	0.2	[{'connected_gene': 'LOC105379331', 'score': 550.77}, {'connected_gene': 'CDCA2', 'score': 10.35}, {'connected_gene': 'KCTD9', 'score': 10.35}, {'connected_gene': 'GC08M025333', 'score': 0.44}, {'connected_gene': 'DOCK5', 'score': 0.1}]
chr8	GH08I025358	25358806	25360784	0.31	[{'connected_gene': 'LOC105379331', 'score': 550.77}, {'connected_gene': 'CDCA2', 'score': 10.35}, {'connected_gene': 'KCTD9', 'score': 10.35}, {'connected_gene': 'GC08M025333', 'score': 0.44}, {'connected_gene': 'DOCK5', 'score': 0.1}]
chr8	GH08I025427	25427137	25427230	0.59	[{'connected_gene': 'ENSG00000253476', 'score': 550.77}, {'connected_gene': 'CDCA2', 'score': 10.83}, {'connected_gene': 'KCTD9', 'score': 10.83}, {'connected_gene': 'GC08M025389', 'score': 0.44}]
chr8	GH08I025509	25509945	25510094	0.54	[{'connected_gene': 'GC08P025504', 'score': 0.44}, {'connected_gene': 'CDCA2', 'score': 0.23}, {'connected_gene': 'GC08P025588', 'score': 0.18}]