PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000525729	[[108179245, 108179798], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108332205, 108332295], [108338197, 108338258]]	[[108179697, 108179798], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108332205, 108332286]]
ENST00000527531	[[108201925, 108202294], [108205946, 108206019], [108225641, 108226836], [108253746, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332295], [108333274, 108333368]]	[[108253747, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332286]]
ENST00000524755	[[108202137, 108202294], [108205946, 108206019], [108263934, 108264105], [108276155, 108276210]]	[[108202276, 108202294], [108205946, 108206019], [108263934, 108264105], [108276155, 108276210]]
ENST00000526725	[[108210885, 108211091], [108263934, 108264105], [108276155, 108276255]]	None
ENST00000529391	[[108253726, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332296]]	[[108253747, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332286]]
ENST00000393084	[[108253726, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332295], [108338197, 108338258]]	[[108253747, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332286]]
ENST00000533583	[[108264039, 108264105], [108276155, 108276286], [108277489, 108277690], [108302472, 108302565], [108332205, 108332296]]	[[108264039, 108264105], [108276155, 108276286], [108277489, 108277690], [108302472, 108302565], [108332205, 108332286]]
NM_001330368	[[108179245, 108179798], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108332205, 108332295], [108338197, 108338258]]	[[108179697, 108179798], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108332205, 108332286]]
NM_152587	[[108253726, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332295], [108338197, 108338258]]	[[108253747, 108253902], [108256646, 108256702], [108263934, 108264105], [108276155, 108276286], [108277489, 108277690], [108277822, 108277876], [108302472, 108302565], [108332205, 108332286]]

Promoter

Chrom	Start	End	Description
chr11	108338193	108338213	CAGE_peak_2_at_C11orf65_5end
chr11	108338218	108338263	CAGE_peak_1_at_C11orf65_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I108246	108246344	108247842	0.56	[{'connected_gene': 'ACAT1', 'score': 21.51}, {'connected_gene': 'ATM', 'score': 11.75}, {'connected_gene': 'NPAT', 'score': 11.75}, {'connected_gene': 'ENSG00000255467', 'score': 10.36}, {'connected_gene': 'DDX10', 'score': 10.01}, {'connected_gene': 'C11orf65', 'score': 4.88}, {'connected_gene': 'GC11M108232', 'score': 0.37}, {'connected_gene': 'ENSG00000206967', 'score': 0.37}, {'connected_gene': 'PIR35860', 'score': 0.13}]
chr11	GH11I108233	108233068	108244142	1.25	[{'connected_gene': 'ACAT1', 'score': 28.0}, {'connected_gene': 'ATM', 'score': 10.79}, {'connected_gene': 'ENSG00000255467', 'score': 10.36}, {'connected_gene': 'DDX10', 'score': 10.01}, {'connected_gene': 'C11orf65', 'score': 7.89}, {'connected_gene': 'KDELC2', 'score': 7.85}, {'connected_gene': 'GC11M108232', 'score': 0.44}, {'connected_gene': 'ENSG00000206967', 'score': 0.44}, {'connected_gene': 'PIR35860', 'score': 0.12}]
chr11	GH11I108215	108215348	108217503	0.46	[{'connected_gene': 'ACAT1', 'score': 19.17}, {'connected_gene': 'ENSG00000255467', 'score': 10.9}, {'connected_gene': 'C11orf65', 'score': 5.11}, {'connected_gene': 'ATM', 'score': 0.44}, {'connected_gene': 'NPAT', 'score': 0.44}]
chr11	GH11I108340	108340634	108341661	0.89	[{'connected_gene': 'ACAT1', 'score': 10.62}, {'connected_gene': 'PIR35860', 'score': 0.29}, {'connected_gene': 'GC11M108232', 'score': 0.14}, {'connected_gene': 'ENSG00000206967', 'score': 0.14}, {'connected_gene': 'C11orf65', 'score': 0.13}, {'connected_gene': 'ATM', 'score': 0.13}]
chr11	GH11I108219	108219775	108231947	2.31	[{'connected_gene': 'NPAT', 'score': 602.81}, {'connected_gene': 'ATM', 'score': 562.27}, {'connected_gene': 'ACAT1', 'score': 22.97}, {'connected_gene': 'DDX10', 'score': 19.44}, {'connected_gene': 'KDELC2', 'score': 17.39}, {'connected_gene': 'CWF19L2', 'score': 11.55}, {'connected_gene': 'ENSG00000255467', 'score': 10.92}, {'connected_gene': 'C11orf65', 'score': 4.91}, {'connected_gene': 'GC11M108232', 'score': 0.77}, {'connected_gene': 'ENSG00000206967', 'score': 0.77}]
chr11	GH11I108465	108465922	108468650	2.03	[{'connected_gene': 'C11orf65', 'score': 550.77}, {'connected_gene': 'NPAT', 'score': 15.57}, {'connected_gene': 'KDELC2', 'score': 11.78}, {'connected_gene': 'DDX10', 'score': 10.06}, {'connected_gene': 'ACAT1', 'score': 9.33}, {'connected_gene': 'PIR35860', 'score': 0.16}]
chr11	GH11I108432	108432113	108433894	0.31	[{'connected_gene': 'KDELC2', 'score': 18.17}, {'connected_gene': 'ACAT1', 'score': 11.35}, {'connected_gene': 'C11orf65', 'score': 4.7}, {'connected_gene': 'PIR35860', 'score': 0.22}]
chr11	GH11I108474	108474759	108475030	0.54	[{'connected_gene': 'KDELC2', 'score': 7.8}, {'connected_gene': 'LOC105369479', 'score': 0.77}, {'connected_gene': 'C11orf65', 'score': 0.44}]
chr11	GH11I108475	108475274	108475323	0.59	[{'connected_gene': 'LOC105369479', 'score': 0.77}, {'connected_gene': 'C11orf65', 'score': 0.44}, {'connected_gene': 'KDELC2', 'score': 0.34}]