PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376958	[[95254156, 95254326], [95257644, 95257803], [95264443, 95264644], [95271403, 95271584], [95271721, 95271771], [95273331, 95273489], [95275362, 95275554], [95278219, 95278297], [95279266, 95286899]]	[[95254181, 95254326], [95257644, 95257803], [95264443, 95264644], [95271403, 95271584], [95271721, 95271771], [95273331, 95273489], [95275362, 95275554], [95278219, 95278297], [95279266, 95279425]]
NM_180989	[[95254103, 95254326], [95257644, 95257803], [95264443, 95264644], [95271403, 95271584], [95271721, 95271771], [95273331, 95273489], [95275362, 95275554], [95278219, 95278297], [95279266, 95286899]]	[[95254181, 95254326], [95257644, 95257803], [95264443, 95264644], [95271403, 95271584], [95271721, 95271771], [95273331, 95273489], [95275362, 95275554], [95278219, 95278297], [95279266, 95279425]]

Promoter

Chrom	Start	End	Description
chr13	95254046	95254062	CAGE_peak_2_at_GPR180_5end
chr13	95254085	95254171	CAGE_peak_1_at_GPR180_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I094594	94594378	94596890	2	[{'connected_gene': 'TGDS', 'score': 550.77}, {'connected_gene': 'GPR180', 'score': 65.15}, {'connected_gene': 'DCT', 'score': 0.25}]
chr13	GH13I094617	94617527	94617656	0.56	[{'connected_gene': 'TGDS', 'score': 11.68}, {'connected_gene': 'GC13P094634', 'score': 0.37}, {'connected_gene': 'GPR180', 'score': 0.37}]
chr13	GH13I094600	94600789	94603402	2.01	[{'connected_gene': 'GPR180', 'score': 618.24}, {'connected_gene': 'TGDS', 'score': 10.32}, {'connected_gene': 'GC13P094634', 'score': 0.29}]
chr13	GH13I094558	94558609	94560369	0.2	[{'connected_gene': 'GPR180', 'score': 31.32}, {'connected_gene': 'DCT', 'score': 0.44}, {'connected_gene': 'TGDS', 'score': 0.28}]
chr13	GH13I094640	94640358	94642437	0.66	[{'connected_gene': 'GPR180', 'score': 11.63}, {'connected_gene': 'GC13P094634', 'score': 0.44}, {'connected_gene': 'RNA5SP36', 'score': 0.39}]
chr13	GH13I094712	94712307	94713926	0.73	[{'connected_gene': 'SOX21', 'score': 550.77}, {'connected_gene': 'GC13M094711', 'score': 550.77}, {'connected_gene': 'SOX21-AS1', 'score': 550.77}, {'connected_gene': 'GPR180', 'score': 6.19}, {'connected_gene': 'BRD7P5', 'score': 0.25}]