PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000426342	[[47308825, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687393], [47770613, 47770753], [47812300, 47812438]]	[[47311133, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47600947]]
ENST00000399232	[[47309294, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687398], [47770613, 47770753], [48143719, 48144157]]	[[47311133, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687398], [47770613, 47770753], [48143719, 48143792]]
ENST00000399222	[[47309503, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47351246, 47351391]]	[[47311133, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342786]]
ENST00000357362	[[47310987, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687398], [47770613, 47770753], [47812300, 47812321]]	[[47311133, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47600947]]
ENST00000557238	[[47340140, 47341163], [47342635, 47342794], [47343247, 47343403], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504481], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687398], [47770613, 47770753], [48095541, 48095728]]	[[47504410, 47504481], [47530451, 47530781], [47566056, 47566326], [47600916, 47600947]]
ENST00000554762	[[47504391, 47504507], [47530451, 47530781], [47566056, 47566242], [47600916, 47601041]]	[[47504391, 47504507], [47530451, 47530781], [47566056, 47566242], [47600916, 47601041]]
ENST00000482848	[[47527802, 47528199], [47528397, 47528583], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687393], [47770613, 47770753], [47812300, 47812395]]	[[47528461, 47528583], [47530451, 47530781], [47566056, 47566326], [47600916, 47600947]]
ENST00000486952	[[47687257, 47687398], [47770613, 47770753], [47812144, 47812437]]	[[47687257, 47687398], [47770613, 47770753], [47812144, 47812289]]
ENST00000557516	[[47342536, 47342794], [47343247, 47343403], [47351246, 47351425]]	None
ENST00000555521	[[47343121, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389377]]	None
ENST00000472499	[[47768549, 47768742], [47770613, 47770753], [47774433, 47774526], [47775279, 47775345], [47812300, 47812319]]	None
NM_182830	[[47308825, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687393], [47770613, 47770753], [47812300, 47812449]]	[[47311133, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47600947]]
NM_001113498	[[47308825, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687398], [47770613, 47770753], [48143719, 48144157]]	[[47311133, 47311222], [47314968, 47315074], [47324226, 47324357], [47342635, 47342794], [47343247, 47343403], [47346691, 47346712], [47351246, 47351424], [47389214, 47389363], [47426576, 47426846], [47504213, 47504507], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687398], [47770613, 47770753], [48143719, 48143792]]
NR_103766	[[47527819, 47528199], [47528397, 47528583], [47530451, 47530781], [47566056, 47566326], [47600916, 47601049], [47613280, 47613477], [47687223, 47687393], [47770613, 47770753], [47812300, 47812449]]	None

Promoter

Chrom	Start	End	Description
chr14	48095757	48095782	CAGE_peak_3_at_MDGA2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I047201	47201110	47201169	0.5	[{'connected_gene': 'RPL13AP2', 'score': 550.77}, {'connected_gene': 'PIR39237', 'score': 550.77}, {'connected_gene': 'GC14M047201', 'score': 550.77}, {'connected_gene': 'MDGA2', 'score': 550.04}, {'connected_gene': 'GC14P047225', 'score': 0.34}]
chr14	GH14I047560	47560797	47561190	0.28	[{'connected_gene': 'MDGA2', 'score': 9.08}, {'connected_gene': 'GC14P047591', 'score': 0.29}, {'connected_gene': 'GC14P047492', 'score': 0.2}]
chr14	GH14I047616	47616858	47616902	0.22	[{'connected_gene': 'MDGA2', 'score': 1.7}, {'connected_gene': 'GC14M047600', 'score': 0.39}, {'connected_gene': 'GC14P047635', 'score': 0.37}]
chr14	GH14I047675	47674765	47676503	1.12	[{'connected_gene': 'MDGA2', 'score': 550.77}, {'connected_gene': 'GC14P047693', 'score': 0.37}]
chr14	GH14I047640	47640536	47640911	0.25	[{'connected_gene': 'MDGA2', 'score': 3.61}, {'connected_gene': 'GC14P047635', 'score': 0.44}]
chr14	GH14I047674	47674258	47674407	0.31	[{'connected_gene': 'MDGA2', 'score': 550.77}, {'connected_gene': 'GC14P047635', 'score': 0.28}]
chr14	GH14I047057	47057197	47057517	0.23	[{'connected_gene': 'GC14P047061', 'score': 0.77}, {'connected_gene': 'GC14M047039', 'score': 0.37}, {'connected_gene': 'MDGA2', 'score': 0.03}]
chr14	GH14I047438	47438277	47439587	0.2	[{'connected_gene': 'GC14P047443', 'score': 0.77}, {'connected_gene': 'GC14P047421', 'score': 0.37}, {'connected_gene': 'MDGA2', 'score': 0.07}]
chr14	GH14I047044	47044938	47045087	0.49	[{'connected_gene': 'GC14M047039', 'score': 0.77}, {'connected_gene': 'GC14P047061', 'score': 0.37}, {'connected_gene': 'MDGA2', 'score': 0.03}]
chr14	GH14I047389	47389698	47389767	0.31	[{'connected_gene': 'GC14P047408', 'score': 0.37}, {'connected_gene': 'GC14M047301', 'score': 0.17}, {'connected_gene': 'MDGA2', 'score': 0.06}]
chr14	GH14I047107	47107601	47107800	0.2	[{'connected_gene': 'GC14P047112', 'score': 0.44}, {'connected_gene': 'GC14M047083', 'score': 0.34}, {'connected_gene': 'MDGA2', 'score': 0.03}]
chr14	GH14I047442	47442378	47442487	0.49	[{'connected_gene': 'GC14P047443', 'score': 550.77}, {'connected_gene': 'GC14P047421', 'score': 0.34}, {'connected_gene': 'MDGA2', 'score': 0.07}]
chr14	GH14I046841	46841458	46841607	0.38	[{'connected_gene': 'GC14P046839', 'score': 550.77}, {'connected_gene': 'GC14P046961', 'score': 0.13}, {'connected_gene': 'MDGA2', 'score': 0.03}]
chr14	GH14I047103	47103600	47104254	0.2	[{'connected_gene': 'GC14P047112', 'score': 0.44}, {'connected_gene': 'GC14M047083', 'score': 0.37}, {'connected_gene': 'MDGA2', 'score': 0.03}]
chr14	GH14I047365	47365980	47366327	0.2	[{'connected_gene': 'GC14P047408', 'score': 0.26}, {'connected_gene': 'GC14M047301', 'score': 0.2}, {'connected_gene': 'MDGA2', 'score': 0.06}]
chr14	GH14I047226	47226362	47228238	0.78	[{'connected_gene': 'GC14P047225', 'score': 0.77}, {'connected_gene': 'GC14M047233', 'score': 0.44}, {'connected_gene': 'GC14M047234', 'score': 0.44}, {'connected_gene': 'MDGA2', 'score': 0.05}]