PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000592345	[[14057455, 14057514], [14077327, 14077525], [14078198, 14078297], [14084875, 14085075], [14132273, 14132489]]	None
ENST00000589203	[[14075985, 14077525], [14078198, 14078297], [14080187, 14080265], [14084195, 14084346], [14084875, 14085075], [14132273, 14132452]]	None
ENST00000587419	[[14075992, 14077525], [14078198, 14078297], [14084875, 14085075], [14124348, 14124475], [14132273, 14132428]]	[[14085052, 14085075], [14124348, 14124475], [14132273, 14132276]]
ENST00000592049	[[14077504, 14077525], [14078198, 14078297], [14080187, 14080265], [14084875, 14085075], [14132273, 14132433]]	None
ENST00000592411	[[14078272, 14078297], [14080187, 14080265], [14084875, 14085075], [14124348, 14124475], [14132273, 14132428]]	None
ENST00000591393	[[14082165, 14082906], [14084330, 14084346], [14084875, 14085075], [14132273, 14132427]]	None
ENST00000589498	[[14099936, 14101772], [14124348, 14124475], [14132273, 14132427]]	[[14101659, 14101772], [14124348, 14124475], [14132273, 14132276]]
ENST00000590202	[[14104719, 14106408], [14124348, 14124475], [14132273, 14132429]]	[[14104915, 14106408], [14124348, 14124475], [14132273, 14132276]]
ENST00000588435	[[14105992, 14106408], [14132273, 14132456]]	None
ENST00000587512	[[14121791, 14122170], [14124348, 14124475], [14132273, 14132428]]	None
ENST00000586507	[[14122161, 14122602], [14123112, 14123206], [14124348, 14124475], [14132273, 14132437]]	None
ENST00000591987	[[14124044, 14124475], [14132273, 14132431]]	None
NR_033354	[[14075988, 14077525], [14078198, 14078297], [14080187, 14080265], [14084195, 14084346], [14084875, 14085075], [14132273, 14132489]]	None
NM_145287	[[14099941, 14106408], [14124348, 14124475], [14132273, 14132489]]	[[14104915, 14106408], [14124348, 14124475], [14132273, 14132276]]

Promoter

Chrom	Start	End	Description
chr18	14132422	14132440	CAGE_peak_1_at_ZNF519_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I013307	13307857	13310244	0.38	[{'connected_gene': 'LDLRAD4', 'score': 11.22}, {'connected_gene': 'ZNF519', 'score': 4.36}, {'connected_gene': 'PIR43692', 'score': 0.44}, {'connected_gene': 'ENSG00000279275', 'score': 0.31}]
chr18	GH18I013445	13445201	13445800	0.79	[{'connected_gene': 'PTPN2', 'score': 16.12}, {'connected_gene': 'PSMG2', 'score': 13.06}, {'connected_gene': 'ZNF519', 'score': 12.91}, {'connected_gene': 'ENSG00000266969', 'score': 10.32}, {'connected_gene': 'ENSG00000267756', 'score': 10.22}, {'connected_gene': 'HMGB3P28', 'score': 9.77}, {'connected_gene': 'GC18P013454', 'score': 0.44}, {'connected_gene': 'LDLRAD4-AS1', 'score': 0.37}, {'connected_gene': 'LDLRAD4', 'score': 0.07}]
chr18	GH18I013824	13824000	13824401	1.45	[{'connected_gene': 'MC5R', 'score': 553.99}, {'connected_gene': 'ZNF519', 'score': 16.82}, {'connected_gene': 'ENSG00000267756', 'score': 13.18}, {'connected_gene': 'CEP192', 'score': 11.98}, {'connected_gene': 'PTPN2', 'score': 11.82}, {'connected_gene': 'RNMT', 'score': 10.99}, {'connected_gene': 'GC18M015416', 'score': 0.31}]
chr18	GH18I013310	13310785	13311886	0.43	[{'connected_gene': 'ZNF519', 'score': 4.16}, {'connected_gene': 'PIR43692', 'score': 0.77}, {'connected_gene': 'ENSG00000279275', 'score': 0.29}, {'connected_gene': 'LDLRAD4', 'score': 0.16}]
chr18	GH18I013324	13324507	13325130	0.2	[{'connected_gene': 'ZNF519', 'score': 4.57}, {'connected_gene': 'GC18P013327', 'score': 0.77}, {'connected_gene': 'PIR43692', 'score': 0.44}, {'connected_gene': 'LDLRAD4', 'score': 0.14}]
chr18	GH18I014025	14025347	14026679	0.2	[{'connected_gene': 'ZNF519', 'score': 15.55}, {'connected_gene': 'ENSG00000279352', 'score': 0.37}, {'connected_gene': 'LOC100128776', 'score': 0.31}]
chr18	GH18I014131	14131400	14133200	1.91	[{'connected_gene': 'ZNF519', 'score': 591.47}, {'connected_gene': 'ENSG00000267356', 'score': 0.31}]
chr18	GH18I014092	14092797	14093499	0.43	[{'connected_gene': 'ENSG00000267150', 'score': 0.77}, {'connected_gene': 'ENSG00000267356', 'score': 0.39}, {'connected_gene': 'ZNF519', 'score': 0.28}]