PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000358193	[[55271735, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307288, 55307375], [55307473, 55307925]]	[[55271789, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307288, 55307349]]
ENST00000371273	[[55271774, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307473, 55307925]]	[[55271789, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307473, 55307546]]
NM_001110533	[[55271735, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307473, 55307937]]	[[55271789, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307473, 55307546]]
NM_152607	[[55271735, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307288, 55307375], [55307473, 55307937]]	[[55271789, 55271893], [55272668, 55272756], [55273198, 55273363], [55273561, 55273684], [55277466, 55277604], [55277718, 55277862], [55279486, 55279648], [55280586, 55280712], [55282661, 55282795], [55307288, 55307349]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I054792	54792785	54802259	2.29	[{'connected_gene': 'TTC22', 'score': 556.82}, {'connected_gene': 'LEXM', 'score': 14.56}, {'connected_gene': 'PARS2', 'score': 11.8}, {'connected_gene': 'TTC4', 'score': 10.29}, {'connected_gene': 'ENSG00000242396', 'score': 9.65}, {'connected_gene': 'DHCR24', 'score': 9.65}, {'connected_gene': 'ENSG00000233203', 'score': 9.64}, {'connected_gene': 'ENSG00000237453', 'score': 0.77}, {'connected_gene': 'PIR51709', 'score': 0.77}, {'connected_gene': 'GC01M054800', 'score': 0.77}]
chr1	GH01I054979	54979919	54980010	0.33	[{'connected_gene': 'TMEM61', 'score': 577.77}, {'connected_gene': 'LOC105378736', 'score': 550.77}, {'connected_gene': 'MROH7', 'score': 2.14}, {'connected_gene': 'LEXM', 'score': 1.89}, {'connected_gene': 'GC01P054966', 'score': 0.39}]
chr1	GH01I054803	54803714	54805590	0.79	[{'connected_gene': 'LEXM', 'score': 555.78}, {'connected_gene': 'TTC22', 'score': 5.08}, {'connected_gene': 'GC01M054800', 'score': 0.77}]
chr1	GH01I054813	54813580	54816483	0.58	[{'connected_gene': 'LEXM', 'score': 9.24}, {'connected_gene': 'GC01P054809', 'score': 0.44}, {'connected_gene': 'GC01P054854', 'score': 0.28}]
chr1	GH01I054807	54806973	54808540	0.74	[{'connected_gene': 'LEXM', 'score': 564.13}, {'connected_gene': 'GC01P054809', 'score': 0.77}]
chr1	GH01I054806	54806032	54806091	0.81	[{'connected_gene': 'LEXM', 'score': 550.77}, {'connected_gene': 'GC01M054800', 'score': 0.77}]
chr1	GH01I054871	54871024	54872962	0.65	[{'connected_gene': 'ENSG00000233203', 'score': 11.55}, {'connected_gene': 'TTC22', 'score': 10.71}, {'connected_gene': 'TMEM61', 'score': 10.32}, {'connected_gene': 'ENSG00000237453', 'score': 10.28}, {'connected_gene': 'MROH7', 'score': 9.56}, {'connected_gene': 'LEXM', 'score': 5.15}, {'connected_gene': 'PIR36544', 'score': 0.77}, {'connected_gene': 'DHCR24', 'score': 0.37}, {'connected_gene': 'GC01P054854', 'score': 0.37}]
chr1	GH01I054849	54849788	54851977	0.76	[{'connected_gene': 'ENSG00000233203', 'score': 21.5}, {'connected_gene': 'TTC22', 'score': 10.87}, {'connected_gene': 'ENSG00000242396', 'score': 10.8}, {'connected_gene': 'DHCR24', 'score': 10.8}, {'connected_gene': 'ENSG00000237453', 'score': 10.67}, {'connected_gene': 'LEXM', 'score': 6.59}, {'connected_gene': 'GC01P054854', 'score': 0.77}, {'connected_gene': 'GC01P054809', 'score': 0.26}]
chr1	GH01I054877	54874368	54874686	0.66	[{'connected_gene': 'PIR36544', 'score': 550.77}, {'connected_gene': 'MROH7', 'score': 38.79}, {'connected_gene': 'LEXM', 'score': 24.57}, {'connected_gene': 'DHCR24', 'score': 0.39}, {'connected_gene': 'GC01P054854', 'score': 0.34}]
chr1	GH01I054882	54882271	54890116	2.29	[{'connected_gene': 'ENSG00000233203', 'score': 564.79}, {'connected_gene': 'DHCR24', 'score': 562.33}, {'connected_gene': 'ENSG00000242396', 'score': 550.77}, {'connected_gene': 'SSBP3-AS1', 'score': 23.2}, {'connected_gene': 'HSPB11', 'score': 14.4}, {'connected_gene': 'ENSG00000279049', 'score': 12.58}, {'connected_gene': 'TMEM61', 'score': 10.71}, {'connected_gene': 'TTC22', 'score': 10.62}, {'connected_gene': 'PARS2', 'score': 10.52}, {'connected_gene': 'LRRC42', 'score': 10.5}, {'connected_gene': 'ENSG00000237453', 'score': 10.04}, {'connected_gene': 'TTC4', 'score': 9.99}, {'connected_gene': 'LEXM', 'score': 5.27}, {'connected_gene': 'PIR36544', 'score': 0.39}]
chr1	GH01I054864	54864880	54868308	1.11	[{'connected_gene': 'ENSG00000233203', 'score': 21.5}, {'connected_gene': 'DHCR24', 'score': 19.7}, {'connected_gene': 'ENSG00000242396', 'score': 11.81}, {'connected_gene': 'TTC22', 'score': 10.31}, {'connected_gene': 'ENSG00000237453', 'score': 10.29}, {'connected_gene': 'LEXM', 'score': 5.8}, {'connected_gene': 'TMEM61', 'score': 5.22}, {'connected_gene': 'PIR36544', 'score': 0.44}, {'connected_gene': 'GC01P054854', 'score': 0.39}]
chr1	GH01I054856	54856102	54863609	1.37	[{'connected_gene': 'ENSG00000233203', 'score': 21.3}, {'connected_gene': 'DHCR24', 'score': 19.24}, {'connected_gene': 'LEXM', 'score': 18.32}, {'connected_gene': 'ENSG00000242396', 'score': 11.78}, {'connected_gene': 'TTC22', 'score': 10.08}, {'connected_gene': 'ENSG00000237453', 'score': 9.99}, {'connected_gene': 'LDLRAD1', 'score': 9.33}, {'connected_gene': 'TCEANC2', 'score': 8.86}, {'connected_gene': 'TMEM59', 'score': 8.86}, {'connected_gene': 'TMEM61', 'score': 5.9}, {'connected_gene': 'GC01P054854', 'score': 0.44}, {'connected_gene': 'PIR36544', 'score': 0.37}]
chr1	GH01I054809	54809342	54810438	0.65	[{'connected_gene': 'GC01P054809', 'score': 550.77}, {'connected_gene': 'LEXM', 'score': 13.66}, {'connected_gene': 'GC01P054854', 'score': 0.26}]
chr1	GH01I054810	54810588	54810737	0.66	[{'connected_gene': 'GC01P054809', 'score': 550.77}, {'connected_gene': 'LEXM', 'score': 0.77}, {'connected_gene': 'GC01P054854', 'score': 0.26}]
chr1	GH01I054814	54813248	54813397	0.66	[{'connected_gene': 'GC01P054809', 'score': 0.77}, {'connected_gene': 'LEXM', 'score': 0.44}, {'connected_gene': 'GC01P054854', 'score': 0.26}]
chr1	GH01I054402	54402909	54403103	0.44	[{'connected_gene': 'ENSG00000225632', 'score': 10.93}, {'connected_gene': 'TCEANC2', 'score': 9.77}, {'connected_gene': 'TMEM59', 'score': 9.77}, {'connected_gene': 'LEXM', 'score': 7.95}, {'connected_gene': 'MROH7', 'score': 7.32}, {'connected_gene': 'PIR46432', 'score': 0.44}, {'connected_gene': 'SSBP3', 'score': 0.39}, {'connected_gene': 'GC01M054384', 'score': 0.37}]