PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000334304	[[22389006, 22390570], [22390710, 22390806], [22394167, 22394313], [22403053, 22403177], [22404297, 22404422], [22414804, 22415013], [22415223, 22415437], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22517150, 22517677]]	[[22389327, 22390570], [22390710, 22390806], [22394167, 22394313], [22403053, 22403177], [22404297, 22404422], [22414804, 22415013], [22415223, 22415437], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22517150, 22517407]]
ENST00000282943	[[22389330, 22390570], [22390710, 22390806], [22394167, 22394313], [22403053, 22403177], [22404297, 22404422], [22414804, 22415013], [22415223, 22415383], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22457431, 22457457]]	None
ENST00000504617	[[22394167, 22394313], [22414804, 22414938]]	None
ENST00000511051	[[22346693, 22346968], [22348355, 22348446], [22390710, 22390806], [22394167, 22394313], [22403053, 22403127]]	[[22348445, 22348446], [22390710, 22390806], [22394167, 22394175]]
ENST00000499527	[[22389022, 22390570], [22390710, 22390806], [22394167, 22396491]]	None
ENST00000506155	[[22414828, 22415013], [22415223, 22415709]]	None
ENST00000508133	[[22415816, 22416229], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22444702, 22444758]]	[[22416214, 22416229], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22444702, 22444730]]
ENST00000502482	[[22421660, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22517150, 22517620]]	[[22422466, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22517150, 22517407]]
ENST00000514129	[[22439880, 22440043], [22444272, 22444486], [22446663, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475441]]	[[22439880, 22440043], [22444272, 22444400]]
ENST00000506133	[[22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22463359, 22463431], [22475394, 22475429]]	None
ENST00000513385	[[22446622, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22516087, 22516203]]	None
ENST00000514749	[[22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22479246, 22479299], [22479715, 22479859]]	None
ENST00000506346	[[22474642, 22474854], [22475394, 22475466], [22517150, 22517319]]	None
NM_145290	[[22388996, 22390570], [22390710, 22390806], [22394167, 22394313], [22403053, 22403177], [22404297, 22404422], [22414804, 22415013], [22415223, 22415437], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22517150, 22517677]]	[[22389327, 22390570], [22390710, 22390806], [22394167, 22394313], [22403053, 22403177], [22404297, 22404422], [22414804, 22415013], [22415223, 22415437], [22422508, 22422712], [22425813, 22425975], [22436933, 22437089], [22438062, 22438264], [22439878, 22440043], [22444272, 22444486], [22446595, 22446756], [22449062, 22449134], [22456488, 22456560], [22463359, 22463431], [22475394, 22475466], [22517150, 22517407]]

Promoter

Chrom	Start	End	Description
chr4	22444733	22444767	CAGE_peak_4_at_GPR125_5end
chr4	22517512	22517537	CAGE_peak_5_at_GPR125_5end
chr4	22517551	22517593	CAGE_peak_2_at_GPR125_5end
chr4	22517624	22517712	CAGE_peak_1_at_GPR125_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I022674	22674796	22674811	0.24	[{'connected_gene': 'ADGRA3', 'score': 10.48}, {'connected_gene': 'GBA3', 'score': 0.37}, {'connected_gene': 'LOC105374520', 'score': 0.28}]
chr4	GH04I022668	22668339	22669174	0.58	[{'connected_gene': 'ADGRA3', 'score': 15.91}, {'connected_gene': 'GBA3', 'score': 0.34}, {'connected_gene': 'LOC105374520', 'score': 0.29}]
chr4	GH04I022667	22667479	22667715	0.22	[{'connected_gene': 'ADGRA3', 'score': 10.89}, {'connected_gene': 'GBA3', 'score': 0.31}, {'connected_gene': 'LOC105374520', 'score': 0.29}]
chr4	GH04I022685	22685824	22686907	0.31	[{'connected_gene': 'ADGRA3', 'score': 11.0}, {'connected_gene': 'GBA3', 'score': 10.53}, {'connected_gene': 'LOC105374520', 'score': 0.23}]
chr4	GH04I023422	23422281	23424279	0.31	[{'connected_gene': 'ADGRA3', 'score': 4.8}, {'connected_gene': 'LOC105374523', 'score': 0.34}, {'connected_gene': 'GC04M023482', 'score': 0.17}]
chr4	GH04I022661	22661462	22661822	0.26	[{'connected_gene': 'ADGRA3', 'score': 10.01}, {'connected_gene': 'LOC105374520', 'score': 0.31}, {'connected_gene': 'GC04P022629', 'score': 0.29}, {'connected_gene': 'GBA3', 'score': 0.29}]
chr4	GH04I022556	22556652	22557153	0.2	[{'connected_gene': 'ADGRA3', 'score': 11.75}, {'connected_gene': 'RPS27P13', 'score': 0.28}]
chr4	GH04I022532	22531338	22531487	0.2	[{'connected_gene': 'ADGRA3', 'score': 6.17}, {'connected_gene': 'RPS27P13', 'score': 0.21}]
chr4	GH04I022531	22531663	22531902	0.2	[{'connected_gene': 'ADGRA3', 'score': 5.31}, {'connected_gene': 'RPS27P13', 'score': 0.21}]
chr4	GH04I022471	22471062	22476399	1.17	[{'connected_gene': 'ADGRA3', 'score': 18.44}, {'connected_gene': 'PIR53421', 'score': 0.29}, {'connected_gene': 'GC04P022366', 'score': 0.14}]
chr4	GH04I022499	22499081	22503956	1.18	[{'connected_gene': 'ADGRA3', 'score': 9.28}, {'connected_gene': 'PIR53421', 'score': 0.44}, {'connected_gene': 'GC04P022366', 'score': 0.12}]
chr4	GH04I022489	22489846	22491781	0.62	[{'connected_gene': 'ADGRA3', 'score': 19.38}, {'connected_gene': 'PIR53421', 'score': 0.37}, {'connected_gene': 'GC04P022366', 'score': 0.13}]
chr4	GH04I022487	22487264	22488608	0.6	[{'connected_gene': 'ADGRA3', 'score': 19.78}, {'connected_gene': 'PIR53421', 'score': 0.37}, {'connected_gene': 'GC04P022366', 'score': 0.13}]
chr4	GH04I022482	22482244	22486493	1.14	[{'connected_gene': 'ADGRA3', 'score': 20.07}, {'connected_gene': 'PIR53421', 'score': 0.34}, {'connected_gene': 'GC04P022366', 'score': 0.13}]
chr4	GH04I022513	22513463	22517216	2.13	[{'connected_gene': 'ADGRA3', 'score': 555.8}, {'connected_gene': 'PIR53421', 'score': 0.44}]
chr4	GH04I022635	22635172	22635409	0.36	[{'connected_gene': 'LOC105374520', 'score': 550.77}, {'connected_gene': 'ADGRA3', 'score': 10.5}, {'connected_gene': 'GBA3', 'score': 1.83}, {'connected_gene': 'GC04P022629', 'score': 0.44}]
chr4	GH04I022634	22634610	22634740	0.42	[{'connected_gene': 'LOC105374520', 'score': 550.77}, {'connected_gene': 'ADGRA3', 'score': 10.5}, {'connected_gene': 'GC04P022629', 'score': 0.44}]
chr4	GH04I022389	22389378	22389507	0.56	[{'connected_gene': 'GC04P022366', 'score': 0.34}, {'connected_gene': 'ADGRA3', 'score': 0.13}, {'connected_gene': 'PIR53421', 'score': 0.13}]
chr4	GH04I022385	22385074	22386272	0.46	[{'connected_gene': 'GC04P022366', 'score': 0.37}, {'connected_gene': 'PIR53421', 'score': 0.13}, {'connected_gene': 'ADGRA3', 'score': 0.12}]