PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000328747	[[64838711, 64838913], [64852814, 64852941], [64853718, 64853814], [64863253, 64866038]]	[[64838910, 64838913], [64852814, 64852941], [64853718, 64853814], [64863253, 64864788]]
ENST00000488849	[[64838750, 64838913], [64852814, 64853233]]	None
ENST00000431504	[[64838751, 64838913], [64863253, 64866038]]	[[64863255, 64864788]]
ENST00000357512	[[64838767, 64838913], [64852814, 64852941], [64863253, 64865997]]	[[64838910, 64838913], [64852814, 64852941], [64863253, 64864788]]
ENST00000450302	[[64838793, 64838913], [64853718, 64853814], [64863253, 64865994]]	[[64853795, 64853814], [64863253, 64864788]]
NM_001287534	[[64838711, 64838913], [64863253, 64866048]]	[[64863255, 64864788]]
NM_007139	[[64838711, 64838913], [64853718, 64853814], [64863253, 64866048]]	[[64853795, 64853814], [64863253, 64864788]]
NM_001287532	[[64838711, 64838913], [64852814, 64852941], [64863253, 64866048]]	[[64838910, 64838913], [64852814, 64852941], [64863253, 64864788]]
NM_152626	[[64838711, 64838913], [64852814, 64852941], [64853718, 64853814], [64863253, 64866048]]	[[64838910, 64838913], [64852814, 64852941], [64853718, 64853814], [64863253, 64864788]]
NM_001287533	[[64838711, 64838913], [64852814, 64852941], [64853718, 64853814], [64854765, 64854887], [64863253, 64866048]]	[[64863255, 64864788]]

Promoter

Chrom	Start	End	Description
chr7	64838754	64838778	CAGE_peak_1_at_ZNF92_5end
chr7	64838786	64838809	CAGE_peak_2_at_ZNF92_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I066206	66206954	66207376	0.2	[{'connected_gene': 'TPST1', 'score': 550.77}, {'connected_gene': 'ZNF92', 'score': 3.96}, {'connected_gene': 'PIR59576', 'score': 0.34}]
chr7	GH07I066204	66204548	66206704	2.01	[{'connected_gene': 'TPST1', 'score': 550.77}, {'connected_gene': 'LOC100996437', 'score': 33.63}, {'connected_gene': 'ZNF92', 'score': 3.96}, {'connected_gene': 'PIR59576', 'score': 0.31}]
chr7	GH07I065443	65443397	65446899	0.88	[{'connected_gene': 'CCT6P3', 'score': 19.58}, {'connected_gene': 'ZNF117', 'score': 11.22}, {'connected_gene': 'ZNF273', 'score': 6.84}, {'connected_gene': 'ERV3-1', 'score': 6.29}, {'connected_gene': 'CRCP', 'score': 4.66}, {'connected_gene': 'ENSG00000238124', 'score': 0.37}, {'connected_gene': 'ZNF92', 'score': 0.19}]
chr7	GH07I065448	65448433	65449821	0.59	[{'connected_gene': 'CCT6P3', 'score': 23.03}, {'connected_gene': 'ENSG00000238124', 'score': 0.39}, {'connected_gene': 'ZNF92', 'score': 0.18}]
chr7	GH07I065441	65441208	65441357	0.59	[{'connected_gene': 'CCT6P3', 'score': 20.06}, {'connected_gene': 'ENSG00000238124', 'score': 0.34}, {'connected_gene': 'ZNF92', 'score': 0.2}]
chr7	GH07I065390	65390075	65392202	0.67	[{'connected_gene': 'CCT6P3', 'score': 19.53}, {'connected_gene': 'VKORC1L1', 'score': 17.12}, {'connected_gene': 'ZNF117', 'score': 7.12}, {'connected_gene': 'GTF2IP14', 'score': 5.27}, {'connected_gene': 'INTS4P1', 'score': 4.68}, {'connected_gene': 'ZNF92', 'score': 0.37}, {'connected_gene': 'ENSG00000238124', 'score': 0.19}]
chr7	GH07I065438	65438208	65439441	0.85	[{'connected_gene': 'CCT6P3', 'score': 18.37}, {'connected_gene': 'VKORC1L1', 'score': 10.76}, {'connected_gene': 'ERV3-1', 'score': 4.35}, {'connected_gene': 'ENSG00000238124', 'score': 0.34}, {'connected_gene': 'ZNF92', 'score': 0.2}]
chr7	GH07I065373	65373188	65375322	2.02	[{'connected_gene': 'ZNF92', 'score': 550.77}, {'connected_gene': 'GTF2IP14', 'score': 48.26}, {'connected_gene': 'GUSB', 'score': 23.35}, {'connected_gene': 'CCT6P1', 'score': 13.01}, {'connected_gene': 'ZNF107', 'score': 12.19}, {'connected_gene': 'CCT6P3', 'score': 10.89}, {'connected_gene': 'ERV3-1', 'score': 10.4}, {'connected_gene': 'ENSG00000238124', 'score': 0.17}]
chr7	GH07I065385	65385392	65385451	0.5	[{'connected_gene': 'ZNF92', 'score': 550.39}, {'connected_gene': 'ENSG00000238124', 'score': 0.18}]
chr7	GH07I065397	65397545	65398463	0.82	[{'connected_gene': 'ZNF92', 'score': 12.13}, {'connected_gene': 'ENSG00000238124', 'score': 0.2}]
chr7	GH07I065509	65509000	65509401	0.89	[{'connected_gene': 'ENSG00000226767', 'score': 550.77}, {'connected_gene': 'INTS4P1', 'score': 26.1}, {'connected_gene': 'GTF2IP14', 'score': 23.63}, {'connected_gene': 'VKORC1L1', 'score': 5.72}, {'connected_gene': 'ZNF117', 'score': 4.54}, {'connected_gene': 'ZNF92', 'score': 4.27}, {'connected_gene': 'PIR53398', 'score': 0.39}, {'connected_gene': 'LOC101929322', 'score': 0.25}]
chr7	GH07I066351	66351889	66358031	1.03	[{'connected_gene': 'PIR34160', 'score': 550.77}, {'connected_gene': 'LOC100996437', 'score': 40.34}, {'connected_gene': 'VKORC1L1', 'score': 29.17}, {'connected_gene': 'GS1-124K5.4', 'score': 21.79}, {'connected_gene': 'RABGEF1', 'score': 15.64}, {'connected_gene': 'ZNF92', 'score': 7.26}, {'connected_gene': 'RNU6-313P', 'score': 0.39}, {'connected_gene': 'GC07P066346', 'score': 0.39}, {'connected_gene': 'TPST1', 'score': 0.11}]