PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000496811	[[153990334, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042286]]	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]
ENST00000308361	[[153993456, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042249]]	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]
ENST00000544526	[[153993457, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154017518, 154017525], [154017619, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042286]]	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154017518, 154017525], [154017619, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]
ENST00000329463	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013086], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013086], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]
ENST00000481941	[[153995423, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154036869, 154037073]]	[[153995423, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033937]]
ENST00000469977	[[154002441, 154002458], [154002602, 154002776], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013116]]	[[154002441, 154002458], [154002602, 154002776], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013116]]
ENST00000481332	[[154002569, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010367]]	None
ENST00000495598	[[153993817, 153994145], [153994535, 153994688], [153995386, 153995624]]	None
ENST00000477549	[[153994341, 153994688], [153995386, 153995683]]	None
ENST00000479934	[[153995413, 153995507], [153998367, 153998458], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776]]	[[153998443, 153998458], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776]]
ENST00000460695	[[153996283, 153998458], [153998551, 153998651], [154000976, 154001007]]	None
ENST00000460875	[[154021132, 154021199], [154022594, 154022761], [154022882, 154023126]]	None
ENST00000462464	[[154027584, 154027612], [154029424, 154030037]]	None
ENST00000491011	[[154032439, 154033069], [154033827, 154033952], [154041962, 154042040]]	None
NM_020865	[[153993456, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042286]]	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013128], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]
NM_001114397	[[153993456, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013086], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042286]]	[[153993959, 153994145], [153994535, 153994688], [153995386, 153995507], [153998367, 153998458], [153998551, 153998651], [154000976, 154001060], [154002371, 154002458], [154002602, 154002776], [154006654, 154006753], [154007497, 154007615], [154010339, 154010483], [154011536, 154011601], [154013072, 154013086], [154017626, 154017714], [154018382, 154018485], [154018775, 154018916], [154021117, 154021199], [154022594, 154022761], [154022882, 154022957], [154024004, 154024084], [154027441, 154027612], [154029424, 154029463], [154032834, 154033069], [154033827, 154033952], [154041962, 154042205]]

Promoter

Chrom	Start	End	Description
chr3	154042214	154042229	CAGE_peak_2_at_DHX36_5end
chr3	154042235	154042290	CAGE_peak_1_at_DHX36_5end
chr3	154042775	154042780	CAGE_peak_8_at_DHX36_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I154366	154366809	154368291	0.2	[{'connected_gene': 'DHX36', 'score': 11.14}, {'connected_gene': 'GPR149', 'score': 10.74}, {'connected_gene': 'DDX50P2', 'score': 0.39}]
chr3	GH03I154322	154322514	154325502	2.02	[{'connected_gene': 'DHX36', 'score': 561.65}, {'connected_gene': 'ARHGEF26-AS1', 'score': 4.62}, {'connected_gene': 'ARHGEF26', 'score': 4.5}, {'connected_gene': 'LOC105374167', 'score': 0.19}]
chr3	GH03I154252	154252989	154253457	0.96	[{'connected_gene': 'LOC105374167', 'score': 550.77}, {'connected_gene': 'DHX36', 'score': 11.07}, {'connected_gene': 'ARHGEF26', 'score': 0.12}]
chr3	GH03I153957	153957953	153960669	0.56	[{'connected_gene': 'ENSG00000201398', 'score': 11.01}, {'connected_gene': 'DHX36', 'score': 9.74}, {'connected_gene': 'ARHGEF26', 'score': 6.25}, {'connected_gene': 'ARHGEF26-AS1', 'score': 5.6}, {'connected_gene': 'LINC02006', 'score': 5.4}, {'connected_gene': 'PIR46913', 'score': 0.37}]