PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000419175	[[98064084, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095650, 98095731], [98097894, 98098300]]	[[98064254, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095650, 98095731], [98097894, 98097981]]
ENST00000371174	[[98064152, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095647, 98095731], [98097894, 98098321]]	[[98064254, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095647, 98095731], [98097894, 98097981]]
NM_001017520	[[98064084, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095650, 98095731], [98097894, 98098321]]	[[98064254, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095650, 98095731], [98097894, 98097981]]
NM_004088	[[98064084, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095647, 98095731], [98097894, 98098321]]	[[98064254, 98064457], [98078108, 98078283], [98079018, 98079147], [98080374, 98080545], [98082413, 98082485], [98084022, 98084146], [98087224, 98087357], [98088481, 98088587], [98092107, 98092353], [98095647, 98095731], [98097894, 98097981]]

Promoter

Chrom	Start	End	Description
chr10	98064150	98064163	CAGE_peak_3_at_DNTT_5end
chr10	98064181	98064237	CAGE_peak_1_at_DNTT_5end
chr10	98064238	98064252	CAGE_peak_2_at_DNTT_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I096308	96308534	96311192	0.86	[{'connected_gene': 'OPALIN', 'score': 10.27}, {'connected_gene': 'ENSG00000229418', 'score': 0.77}, {'connected_gene': 'DNTT', 'score': 0.44}, {'connected_gene': 'GC10P096324', 'score': 0.39}, {'connected_gene': 'GC10P096322', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096331	96330322	96330711	0.24	[{'connected_gene': 'OPALIN', 'score': 11.43}, {'connected_gene': 'GC10P096324', 'score': 0.44}, {'connected_gene': 'GC10P096322', 'score': 0.44}, {'connected_gene': 'GC10P096338', 'score': 0.44}, {'connected_gene': 'DNTT', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.17}]
chr10	GH10I096332	96332104	96333072	0.2	[{'connected_gene': 'OPALIN', 'score': 11.43}, {'connected_gene': 'GC10P096324', 'score': 0.44}, {'connected_gene': 'GC10P096322', 'score': 0.44}, {'connected_gene': 'GC10P096338', 'score': 0.44}, {'connected_gene': 'DNTT', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.18}]
chr10	GH10I096333	96333244	96333373	0.4	[{'connected_gene': 'OPALIN', 'score': 11.43}, {'connected_gene': 'GC10P096338', 'score': 0.44}, {'connected_gene': 'GC10P096324', 'score': 0.39}, {'connected_gene': 'GC10P096322', 'score': 0.39}, {'connected_gene': 'DNTT', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.18}]
chr10	GH10I096330	96330732	96331778	0.38	[{'connected_gene': 'OPALIN', 'score': 11.43}, {'connected_gene': 'GC10P096324', 'score': 0.44}, {'connected_gene': 'GC10P096322', 'score': 0.44}, {'connected_gene': 'GC10P096338', 'score': 0.44}, {'connected_gene': 'DNTT', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.17}]
chr10	GH10I096334	96334627	96336153	0.62	[{'connected_gene': 'OPALIN', 'score': 11.46}, {'connected_gene': 'GC10P096338', 'score': 0.77}, {'connected_gene': 'GC10P096324', 'score': 0.39}, {'connected_gene': 'GC10P096322', 'score': 0.39}, {'connected_gene': 'DNTT', 'score': 0.29}, {'connected_gene': 'GC10M096095', 'score': 0.18}]
chr10	GH10I096284	96284686	96284857	0.22	[{'connected_gene': 'OPALIN', 'score': 9.73}, {'connected_gene': 'RNU6-271P', 'score': 9.67}, {'connected_gene': 'CC2D2B', 'score': 3.86}, {'connected_gene': 'BLNK', 'score': 0.39}, {'connected_gene': 'DNTT', 'score': 0.37}, {'connected_gene': 'GC10M096095', 'score': 0.12}]
chr10	GH10I096285	96285404	96285593	0.65	[{'connected_gene': 'OPALIN', 'score': 9.73}, {'connected_gene': 'RNU6-271P', 'score': 9.67}, {'connected_gene': 'BLNK', 'score': 0.39}, {'connected_gene': 'DNTT', 'score': 0.37}, {'connected_gene': 'GC10M096095', 'score': 0.12}]
chr10	GH10I096286	96286322	96291549	1.58	[{'connected_gene': 'BLNK', 'score': 10.58}, {'connected_gene': 'OPALIN', 'score': 9.73}, {'connected_gene': 'RNU6-271P', 'score': 9.68}, {'connected_gene': 'TLL2', 'score': 4.87}, {'connected_gene': 'DNTT', 'score': 0.37}, {'connected_gene': 'GC10M096095', 'score': 0.13}]
chr10	GH10I096292	96292984	96294075	1.03	[{'connected_gene': 'BLNK', 'score': 11.41}, {'connected_gene': 'OPALIN', 'score': 9.74}, {'connected_gene': 'RNU6-271P', 'score': 9.67}, {'connected_gene': 'DNTT', 'score': 0.39}, {'connected_gene': 'ENSG00000229418', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.13}]
chr10	GH10I096297	96297774	96301604	0.78	[{'connected_gene': 'BLNK', 'score': 4.9}, {'connected_gene': 'DNTT', 'score': 0.77}, {'connected_gene': 'ENSG00000229418', 'score': 0.44}, {'connected_gene': 'GC10M096095', 'score': 0.13}]
chr10	GH10I096294	96294481	96295382	0.2	[{'connected_gene': 'BLNK', 'score': 11.41}, {'connected_gene': 'DNTT', 'score': 0.44}, {'connected_gene': 'ENSG00000229418', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.13}]
chr10	GH10I096283	96283844	96283993	0.46	[{'connected_gene': 'BLNK', 'score': 0.39}, {'connected_gene': 'DNTT', 'score': 0.34}, {'connected_gene': 'GC10M096095', 'score': 0.12}]
chr10	GH10I096277	96276944	96277093	0.51	[{'connected_gene': 'BLNK', 'score': 0.44}, {'connected_gene': 'DNTT', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.12}]
chr10	GH10I096276	96276164	96276313	0.82	[{'connected_gene': 'BLNK', 'score': 0.77}, {'connected_gene': 'DNTT', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.11}]
chr10	GH10I096305	96305151	96305272	0.42	[{'connected_gene': 'DNTT', 'score': 554.52}, {'connected_gene': 'ENSG00000229418', 'score': 550.77}, {'connected_gene': 'BLNK', 'score': 15.74}, {'connected_gene': 'CCNJ', 'score': 1.88}, {'connected_gene': 'ZNF518A', 'score': 1.62}, {'connected_gene': 'CC2D2B', 'score': 1.27}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096302	96302161	96303077	0.38	[{'connected_gene': 'DNTT', 'score': 550.77}, {'connected_gene': 'BLNK', 'score': 6.01}, {'connected_gene': 'ENSG00000229418', 'score': 0.77}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096303	96303307	96303704	0.2	[{'connected_gene': 'DNTT', 'score': 550.77}, {'connected_gene': 'ENSG00000229418', 'score': 0.77}, {'connected_gene': 'BLNK', 'score': 0.29}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096296	96296635	96297118	0.2	[{'connected_gene': 'DNTT', 'score': 0.44}, {'connected_gene': 'ENSG00000229418', 'score': 0.44}, {'connected_gene': 'BLNK', 'score': 0.31}, {'connected_gene': 'GC10M096095', 'score': 0.13}]
chr10	GH10I096295	96295460	96296579	0.2	[{'connected_gene': 'DNTT', 'score': 0.44}, {'connected_gene': 'ENSG00000229418', 'score': 0.39}, {'connected_gene': 'BLNK', 'score': 0.34}, {'connected_gene': 'GC10M096095', 'score': 0.13}]
chr10	GH10I096304	96304387	96304446	0.7	[{'connected_gene': 'DNTT', 'score': 550.77}, {'connected_gene': 'ENSG00000229418', 'score': 0.77}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096311	96311834	96314428	0.31	[{'connected_gene': 'DNTT', 'score': 0.44}, {'connected_gene': 'GC10P096324', 'score': 0.44}, {'connected_gene': 'GC10P096322', 'score': 0.44}, {'connected_gene': 'ENSG00000229418', 'score': 0.44}, {'connected_gene': 'GC10M096095', 'score': 0.15}]
chr10	GH10I096307	96307793	96308174	0.2	[{'connected_gene': 'ENSG00000229418', 'score': 550.77}, {'connected_gene': 'OPALIN', 'score': 10.25}, {'connected_gene': 'DNTT', 'score': 0.77}, {'connected_gene': 'GC10P096324', 'score': 0.39}, {'connected_gene': 'GC10P096322', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096306	96305399	96307425	0.71	[{'connected_gene': 'ENSG00000229418', 'score': 550.77}, {'connected_gene': 'OPALIN', 'score': 10.25}, {'connected_gene': 'DNTT', 'score': 0.77}, {'connected_gene': 'GC10M096095', 'score': 0.14}]
chr10	GH10I096337	96337281	96340058	0.46	[{'connected_gene': 'GC10P096338', 'score': 550.77}, {'connected_gene': 'OPALIN', 'score': 11.46}, {'connected_gene': 'DNTT', 'score': 0.29}, {'connected_gene': 'GC10M096095', 'score': 0.18}]
chr10	GH10I096317	96317988	96318766	0.2	[{'connected_gene': 'GC10P096324', 'score': 0.77}, {'connected_gene': 'GC10P096322', 'score': 0.77}, {'connected_gene': 'DNTT', 'score': 0.39}, {'connected_gene': 'ENSG00000229418', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.15}]
chr10	GH10I096319	96319660	96320547	0.56	[{'connected_gene': 'GC10P096324', 'score': 0.77}, {'connected_gene': 'GC10P096322', 'score': 0.77}, {'connected_gene': 'ENSG00000229418', 'score': 0.39}, {'connected_gene': 'DNTT', 'score': 0.37}, {'connected_gene': 'GC10M096095', 'score': 0.15}]
chr10	GH10I096314	96314557	96315739	0.2	[{'connected_gene': 'GC10P096324', 'score': 0.44}, {'connected_gene': 'GC10P096322', 'score': 0.44}, {'connected_gene': 'ENSG00000229418', 'score': 0.44}, {'connected_gene': 'DNTT', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.15}]
chr10	GH10I096315	96315862	96317134	0.38	[{'connected_gene': 'GC10P096324', 'score': 0.44}, {'connected_gene': 'GC10P096322', 'score': 0.44}, {'connected_gene': 'ENSG00000229418', 'score': 0.44}, {'connected_gene': 'DNTT', 'score': 0.39}, {'connected_gene': 'GC10M096095', 'score': 0.15}]