PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr15	48623286	48623297	CAGE_peak_4_at_DUT_5end
chr15	48623317	48623356	CAGE_peak_3_at_DUT_5end
chr15	48623600	48623667	CAGE_peak_2_at_DUT_5end
chr15	48624350	48624425	CAGE_peak_1_at_DUT_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I049044	49044400	49047226	2.11	[{'connected_gene': 'SECISBP2L', 'score': 555.78}, {'connected_gene': 'DTWD1', 'score': 14.82}, {'connected_gene': 'CEP152', 'score': 12.14}, {'connected_gene': 'DUT', 'score': 10.71}, {'connected_gene': 'SHC4', 'score': 10.46}, {'connected_gene': 'ENSG00000259488', 'score': 10.39}, {'connected_gene': 'RN7SL577P', 'score': 0.77}]
chr15	GH15I049154	49154135	49157201	2.09	[{'connected_gene': 'COPS2', 'score': 574.11}, {'connected_gene': 'NDUFAF4P1', 'score': 550.77}, {'connected_gene': 'GALK2', 'score': 550.77}, {'connected_gene': 'DTWD1', 'score': 38.03}, {'connected_gene': 'DUT', 'score': 22.44}, {'connected_gene': 'ENSG00000259488', 'score': 13.69}, {'connected_gene': 'CEP152', 'score': 13.04}, {'connected_gene': 'FGF7', 'score': 10.96}, {'connected_gene': 'SECISBP2L', 'score': 10.74}, {'connected_gene': 'FAM227B', 'score': 5.64}]
chr15	GH15I048285	48285601	48286199	0.86	[{'connected_gene': 'SLC12A1', 'score': 43.56}, {'connected_gene': 'ENSG00000202542', 'score': 11.2}, {'connected_gene': 'DUT', 'score': 11.17}, {'connected_gene': 'PIR60543', 'score': 0.29}, {'connected_gene': 'GC15M048328', 'score': 0.28}]
chr15	GH15I048925	48925531	48926470	1.24	[{'connected_gene': 'SHC4', 'score': 29.72}, {'connected_gene': 'DUT', 'score': 12.44}, {'connected_gene': 'ENSG00000259656', 'score': 10.66}, {'connected_gene': 'GC15P048919', 'score': 0.44}, {'connected_gene': 'ENSG00000259602', 'score': 0.39}]
chr15	GH15I048693	48693236	48696996	1.28	[{'connected_gene': 'FBN1', 'score': 22.14}, {'connected_gene': 'SLC12A1', 'score': 4.21}, {'connected_gene': 'DUT', 'score': 4.17}, {'connected_gene': 'GC15M048674', 'score': 0.37}, {'connected_gene': 'LOC645405', 'score': 0.29}, {'connected_gene': 'GC15M048517', 'score': 0.25}, {'connected_gene': 'CEP152', 'score': 0.13}]
chr15	GH15I048330	48330123	48333878	2.05	[{'connected_gene': 'DUT', 'score': 556.06}, {'connected_gene': 'ENSG00000259488', 'score': 550.77}, {'connected_gene': 'SLC12A1', 'score': 57.92}, {'connected_gene': 'LOC105370807', 'score': 47.25}, {'connected_gene': 'CEP152', 'score': 10.56}, {'connected_gene': 'FBN1', 'score': 10.19}, {'connected_gene': 'GC15P048420', 'score': 0.17}]
chr15	GH15I047735	47735487	47738160	0.92	[{'connected_gene': 'DUT', 'score': 18.68}, {'connected_gene': 'ENSG00000259488', 'score': 13.83}, {'connected_gene': 'RPL7AP62', 'score': 0.44}, {'connected_gene': 'GC15P047767', 'score': 0.29}, {'connected_gene': 'SEMA6D', 'score': 0.03}]
chr15	GH15I048855	48855441	48856593	0.95	[{'connected_gene': 'DUT', 'score': 18.68}, {'connected_gene': 'ENSG00000259488', 'score': 13.83}, {'connected_gene': 'SHC4', 'score': 11.46}, {'connected_gene': 'EID1', 'score': 0.34}, {'connected_gene': 'CEP152', 'score': 0.26}]
chr15	GH15I048360	48360964	48361093	0.56	[{'connected_gene': 'DUT', 'score': 10.88}, {'connected_gene': 'ENSG00000202542', 'score': 10.86}, {'connected_gene': 'CEP152', 'score': 9.75}, {'connected_gene': 'ENSG00000259488', 'score': 0.31}, {'connected_gene': 'GC15P048420', 'score': 0.22}]
chr15	GH15I048570	48570042	48571504	0.49	[{'connected_gene': 'DUT', 'score': 18.72}, {'connected_gene': 'ENSG00000259488', 'score': 13.87}, {'connected_gene': 'FBN1', 'score': 10.51}, {'connected_gene': 'SHC4', 'score': 9.0}, {'connected_gene': 'GC15P048560', 'score': 0.39}, {'connected_gene': 'GC15P048611', 'score': 0.26}, {'connected_gene': 'GC15M048517', 'score': 0.09}]
chr15	GH15I048384	48384413	48386375	0.66	[{'connected_gene': 'LOC105370807', 'score': 19.37}, {'connected_gene': 'FBN1', 'score': 10.44}, {'connected_gene': 'DUT', 'score': 10.42}, {'connected_gene': 'GC15P048420', 'score': 0.28}, {'connected_gene': 'ENSG00000259488', 'score': 0.23}]
chr15	GH15I048313	48313323	48313514	0.3	[{'connected_gene': 'LOC105370807', 'score': 18.42}, {'connected_gene': 'DUT', 'score': 7.87}, {'connected_gene': 'ENSG00000202542', 'score': 0.39}, {'connected_gene': 'GC15M048328', 'score': 0.39}, {'connected_gene': 'ENSG00000259488', 'score': 0.37}, {'connected_gene': 'PIR60543', 'score': 0.22}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000559935	[[48623207, 48623388], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633655, 48633692]]	[[48623363, 48623388], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633655, 48633681]]
ENST00000559416	[[48623291, 48623388], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634334]]	[[48623363, 48623388], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
ENST00000558813	[[48623601, 48623676], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634490]]	[[48624517, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
ENST00000331200	[[48623619, 48623992], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48635570]]	[[48623712, 48623992], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
ENST00000558472	[[48623652, 48623923], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634249]]	[[48623712, 48623923], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634249]]
ENST00000558978	[[48623669, 48623992], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633659, 48633782], [48634218, 48634592]]	[[48623712, 48623992], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633659, 48633709]]
ENST00000455976	[[48624299, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48635566]]	[[48624448, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
ENST00000559540	[[48624406, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48634592]]	[[48624448, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633625]]
ENST00000558367	[[48624602, 48624934], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634230]]	[[48624908, 48624934], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634230]]
ENST00000561350	[[48626641, 48626705], [48628242, 48628287], [48632341, 48632433]]	None
ENST00000559852	[[48633332, 48633560], [48633711, 48633782], [48634218, 48634259]]	None
NM_001330286	[[48623291, 48623388], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48635566]]	[[48623363, 48623388], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
NM_001025249	[[48623620, 48623676], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48635570]]	[[48624517, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
NM_001025248	[[48623620, 48623992], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48635570]]	[[48623712, 48623992], [48624464, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]
NM_001948	[[48624364, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48635570]]	[[48624448, 48624603], [48626613, 48626705], [48628242, 48628287], [48633485, 48633560], [48633711, 48633782], [48634218, 48634275]]