PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000267273	[[103338093, 103338775], [103339289, 103339407], [103343162, 103343314], [103346718, 103346854]]	[[103338380, 103338775], [103339289, 103339407], [103343162, 103343314], [103346718, 103346848]]
NM_001010977	[[103338096, 103338775], [103339289, 103339407], [103343162, 103343314], [103346718, 103346871]]	[[103338380, 103338775], [103339289, 103339407], [103343162, 103343314], [103346718, 103346848]]

Promoter

Chrom	Start	End	Description
chr13	103356647	103356655	CAGE_peak_1_at_METTL21C_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I102594	102594713	102599922	2.53	[{'connected_gene': 'TPP2', 'score': 570.71}, {'connected_gene': 'ERCC5', 'score': 20.71}, {'connected_gene': 'METTL21C', 'score': 7.86}, {'connected_gene': 'GC13P102663', 'score': 0.2}]
chr13	GH13I102822	102822954	102825092	0.31	[{'connected_gene': 'CCDC168', 'score': 10.53}, {'connected_gene': 'LINC00283', 'score': 10.52}, {'connected_gene': 'ERCC5', 'score': 9.96}, {'connected_gene': 'METTL21EP', 'score': 9.91}, {'connected_gene': 'METTL21C', 'score': 9.74}, {'connected_gene': 'ENSG00000272542', 'score': 9.23}, {'connected_gene': 'RNY5P8', 'score': 0.77}, {'connected_gene': 'GC13P102835', 'score': 0.39}, {'connected_gene': 'BIVM-ERCC5', 'score': 0.34}, {'connected_gene': 'BIVM', 'score': 0.34}]
chr13	GH13I102825	102825264	102827221	0.97	[{'connected_gene': 'CCDC168', 'score': 10.53}, {'connected_gene': 'LINC00283', 'score': 10.52}, {'connected_gene': 'METTL21C', 'score': 9.73}, {'connected_gene': 'ENSG00000272542', 'score': 9.23}, {'connected_gene': 'METTL21EP', 'score': 8.81}, {'connected_gene': 'RNY5P8', 'score': 0.44}, {'connected_gene': 'GC13P102835', 'score': 0.44}, {'connected_gene': 'BIVM-ERCC5', 'score': 0.31}, {'connected_gene': 'BIVM', 'score': 0.31}]
chr13	GH13I102606	102606155	102606887	0.82	[{'connected_gene': 'BIVM', 'score': 10.68}, {'connected_gene': 'ERCC5', 'score': 10.66}, {'connected_gene': 'LINC00283', 'score': 10.22}, {'connected_gene': 'CCDC168', 'score': 10.21}, {'connected_gene': 'METTL21C', 'score': 6.75}, {'connected_gene': 'TPP2', 'score': 0.44}, {'connected_gene': 'GC13P102663', 'score': 0.22}]
chr13	GH13I102844	102844531	102848468	2.28	[{'connected_gene': 'ERCC5', 'score': 572.91}, {'connected_gene': 'BIVM', 'score': 24.61}, {'connected_gene': 'TEX30', 'score': 11.39}, {'connected_gene': 'METTL21EP', 'score': 11.25}, {'connected_gene': 'TPP2', 'score': 10.79}, {'connected_gene': 'CCDC168', 'score': 10.68}, {'connected_gene': 'LINC00283', 'score': 10.66}, {'connected_gene': 'METTL21C', 'score': 9.91}, {'connected_gene': 'GC13P102835', 'score': 0.39}, {'connected_gene': 'GC13M102871', 'score': 0.31}, {'connected_gene': 'BIVM-ERCC5', 'score': 0.25}]
chr13	GH13I102604	102604942	102605781	0.46	[{'connected_gene': 'METTL21C', 'score': 7.62}, {'connected_gene': 'TPP2', 'score': 0.44}, {'connected_gene': 'GC13P102663', 'score': 0.22}]
chr13	GH13I102603	102603173	102604706	0.2	[{'connected_gene': 'METTL21C', 'score': 7.86}, {'connected_gene': 'TPP2', 'score': 0.44}, {'connected_gene': 'GC13P102663', 'score': 0.22}]
chr13	GH13I102729	102729182	102730689	0.85	[{'connected_gene': 'METTL21C', 'score': 10.78}, {'connected_gene': 'LINC00283', 'score': 0.39}, {'connected_gene': 'CCDC168', 'score': 0.31}]
chr13	GH13I102694	102694563	102694622	0.5	[{'connected_gene': 'METTL21C', 'score': 550.77}, {'connected_gene': 'LINC00283', 'score': 0.25}]
chr13	GH13I102703	102703059	102705466	0.69	[{'connected_gene': 'LINC00283', 'score': 11.49}, {'connected_gene': 'CCDC168', 'score': 11.45}, {'connected_gene': 'METTL21C', 'score': 0.44}]
chr13	GH13I102709	102709799	102710887	0.31	[{'connected_gene': 'LINC00283', 'score': 11.51}, {'connected_gene': 'CCDC168', 'score': 11.46}, {'connected_gene': 'METTL21C', 'score': 5.92}, {'connected_gene': 'ENSG00000272542', 'score': 4.75}]
chr13	GH13I102699	102699960	102702086	0.43	[{'connected_gene': 'LINC00283', 'score': 11.29}, {'connected_gene': 'CCDC168', 'score': 11.25}, {'connected_gene': 'METTL21C', 'score': 5.98}]
chr13	GH13I102720	102720171	102720320	0.2	[{'connected_gene': 'LINC00283', 'score': 12.48}, {'connected_gene': 'CCDC168', 'score': 12.42}, {'connected_gene': 'METTL21C', 'score': 11.41}]
chr13	GH13I102706	102706724	102708507	0.94	[{'connected_gene': 'LINC00283', 'score': 11.49}, {'connected_gene': 'CCDC168', 'score': 11.45}, {'connected_gene': 'METTL21C', 'score': 0.39}]
chr13	GH13I102687	102687871	102689107	0.2	[{'connected_gene': 'LINC00283', 'score': 11.02}, {'connected_gene': 'CCDC168', 'score': 10.98}, {'connected_gene': 'GC13P102680', 'score': 0.44}, {'connected_gene': 'METTL21C', 'score': 0.44}]
chr13	GH13I102614	102614077	102614971	0.2	[{'connected_gene': 'LINC00283', 'score': 10.56}, {'connected_gene': 'BIVM', 'score': 9.65}, {'connected_gene': 'ERCC5', 'score': 9.63}, {'connected_gene': 'METTL21C', 'score': 7.89}, {'connected_gene': 'TPP2', 'score': 0.37}, {'connected_gene': 'GC13P102663', 'score': 0.25}]
chr13	GH13I102721	102721811	102722100	0.31	[{'connected_gene': 'LINC00283', 'score': 0.34}, {'connected_gene': 'METTL21C', 'score': 0.31}]
chr13	GH13I102725	102725031	102725180	0.78	[{'connected_gene': 'LINC00283', 'score': 0.37}, {'connected_gene': 'METTL21C', 'score': 0.29}]
chr13	GH13I102840	102840587	102841326	0.2	[{'connected_gene': 'GC13P102841', 'score': 550.77}, {'connected_gene': 'PIR34791', 'score': 550.77}, {'connected_gene': 'GC13P102840', 'score': 550.77}, {'connected_gene': 'ERCC5', 'score': 13.8}, {'connected_gene': 'TEX30', 'score': 11.4}, {'connected_gene': 'BIVM', 'score': 11.18}, {'connected_gene': 'CCDC168', 'score': 10.69}, {'connected_gene': 'LINC00283', 'score': 10.67}, {'connected_gene': 'METTL21C', 'score': 9.92}, {'connected_gene': 'METTL21EP', 'score': 8.88}, {'connected_gene': 'GC13P102835', 'score': 0.44}, {'connected_gene': 'BIVM-ERCC5', 'score': 0.26}]
chr13	GH13I102679	102679571	102679700	0.31	[{'connected_gene': 'GC13P102680', 'score': 550.77}, {'connected_gene': 'GC13P102679', 'score': 550.77}, {'connected_gene': 'LINC00283', 'score': 10.62}, {'connected_gene': 'CCDC168', 'score': 10.6}, {'connected_gene': 'METTL21C', 'score': 7.39}, {'connected_gene': 'TPP2', 'score': 0.18}]
chr13	GH13I102680	102680363	102681401	0.51	[{'connected_gene': 'GC13P102680', 'score': 550.77}, {'connected_gene': 'GC13P102679', 'score': 550.77}, {'connected_gene': 'LINC00283', 'score': 10.62}, {'connected_gene': 'CCDC168', 'score': 10.6}, {'connected_gene': 'METTL21C', 'score': 7.39}]