Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000481631 [[93766679, 93767022], [93780257, 93780450], [93781589, 93781685]] None
ENST00000314636 [[93776765, 93780450], [93781589, 93781831]] [[93779791, 93780355]]
ENST00000394221 [[93776767, 93780450], [93781712, 93782067]] [[93779791, 93780355]]
ENST00000461173 [[93777568, 93777740], [93778822, 93780450], [93781712, 93781743]] [[93779791, 93780355]]
ENST00000496983 [[93780012, 93780450], [93782080, 93782233]] [[93780012, 93780355]]
NM_176815 [[93776765, 93780450], [93781589, 93781831]] [[93779791, 93780355]]
NM_001195643 [[93776765, 93780450], [93781712, 93782067]] [[93779791, 93780355]]
Promoter
Chrom Start End Description
chr3 93781726 93781749 CAGE_peak_2_at_DHFRL1_5end
chr3 93781750 93781778 CAGE_peak_1_at_DHFRL1_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr3 GH03I094061 94061883 94064813 2.03 [{'connected_gene': 'DHFR2', 'score': 554.31}, {'connected_gene': 'NSUN3', 'score': 550.77}, {'connected_gene': 'STX19', 'score': 8.35}]
chr3 GH03I094004 94004189 94004800 0.89 [{'connected_gene': 'DHFR2', 'score': 11.54}, {'connected_gene': 'NSUN3', 'score': 11.54}, {'connected_gene': 'HMGN1P7', 'score': 0.37}, {'connected_gene': 'STX19', 'score': 0.34}, {'connected_gene': 'ARL13B', 'score': 0.34}]
chr3 GH03I093979 93979424 93981904 1.97 [{'connected_gene': 'ARL13B', 'score': 550.77}, {'connected_gene': 'RBBP4P2', 'score': 22.68}, {'connected_gene': 'NSUN3', 'score': 20.51}, {'connected_gene': 'WDR82P1', 'score': 15.84}, {'connected_gene': 'DHFR2', 'score': 10.65}, {'connected_gene': 'GC03M093988', 'score': 0.44}]

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