PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000334128	[[183749331, 183749359], [183752844, 183753010], [183754156, 183754328], [183755808, 183756061], [183756196, 183756412], [183756533, 183757157]]	[[183754187, 183754328], [183755808, 183756061], [183756196, 183756412], [183756533, 183756763]]
ENST00000428798	[[183749529, 183749595], [183752965, 183753010], [183753802, 183753888], [183754162, 183754332], [183754535, 183754684], [183755808, 183756061], [183756196, 183756412], [183756533, 183756763]]	[[183749529, 183749595], [183752965, 183753010], [183753802, 183753888], [183754162, 183754332], [183754535, 183754684], [183755808, 183756061], [183756196, 183756412], [183756533, 183756763]]
ENST00000382489	[[183750618, 183750845], [183752953, 183752983], [183753765, 183753888], [183754162, 183754293], [183754535, 183754684], [183755808, 183756027], [183756156, 183756412], [183756533, 183757072]]	[[183750618, 183750845], [183752953, 183752983], [183753765, 183753888], [183754162, 183754293], [183754535, 183754684], [183755808, 183756027], [183756156, 183756412], [183756533, 183756763]]
ENST00000453435	[[183752891, 183753010], [183755808, 183756061], [183756196, 183756412], [183756533, 183756988]]	[[183753007, 183753010], [183755808, 183756061], [183756196, 183756412], [183756533, 183756763]]
NM_182537	[[183749331, 183749359], [183752844, 183753010], [183754156, 183754328], [183755808, 183756061], [183756196, 183756412], [183756533, 183757157]]	[[183754187, 183754328], [183755808, 183756061], [183756196, 183756412], [183756533, 183756763]]
NM_001145143	[[183749529, 183749595], [183752965, 183753010], [183753802, 183753888], [183754162, 183754332], [183754535, 183754684], [183755808, 183756061], [183756196, 183756412], [183756533, 183757157]]	[[183749529, 183749595], [183752965, 183753010], [183753802, 183753888], [183754162, 183754332], [183754535, 183754684], [183755808, 183756061], [183756196, 183756412], [183756533, 183756763]]
NM_001163646	[[183750618, 183750845], [183752953, 183752983], [183753765, 183753888], [183754162, 183754293], [183754535, 183754684], [183755808, 183756027], [183756156, 183756412], [183756533, 183757157]]	[[183750618, 183750845], [183752953, 183752983], [183753765, 183753888], [183754162, 183754293], [183754535, 183754684], [183755808, 183756027], [183756156, 183756412], [183756533, 183756763]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I183532	183532047	183534792	1.65	[{'connected_gene': 'KLHL6', 'score': 19.74}, {'connected_gene': 'ENSG00000199363', 'score': 10.52}, {'connected_gene': 'ENSG00000251730', 'score': 10.52}, {'connected_gene': 'SNORA63D', 'score': 10.51}, {'connected_gene': 'ENSG00000253092', 'score': 10.51}, {'connected_gene': 'LINC00888', 'score': 10.5}, {'connected_gene': 'EIF4G1', 'score': 10.26}, {'connected_gene': 'YEATS2', 'score': 10.11}, {'connected_gene': 'B3GNT5', 'score': 3.97}, {'connected_gene': 'HTR3D', 'score': 2.38}, {'connected_gene': 'KLHL24', 'score': 2.36}, {'connected_gene': 'KLHL6-AS1', 'score': 0.37}, {'connected_gene': 'ENSG00000271682', 'score': 0.19}]
chr3	GH03I184531	184531609	184531849	0.22	[{'connected_gene': 'CHRD', 'score': 12.08}, {'connected_gene': 'THPO', 'score': 12.08}, {'connected_gene': 'LINC01840', 'score': 11.45}, {'connected_gene': 'EPHB3', 'score': 11.43}, {'connected_gene': 'LINC02054', 'score': 11.12}, {'connected_gene': 'SNORD66', 'score': 10.56}, {'connected_gene': 'EIF4G1', 'score': 10.56}, {'connected_gene': 'FAM131A', 'score': 10.39}, {'connected_gene': 'HTR3E', 'score': 4.89}, {'connected_gene': 'HTR3D', 'score': 1.89}, {'connected_gene': 'LINC01839', 'score': 0.34}]
chr3	GH03I184052	184052967	184053026	0.5	[{'connected_gene': 'HTR3C', 'score': 550.77}, {'connected_gene': 'HTR3D', 'score': 0.34}]
chr3	GH03I184472	184472314	184474024	0.84	[{'connected_gene': 'FAM131A', 'score': 12.12}, {'connected_gene': 'LINC02054', 'score': 11.46}, {'connected_gene': 'LINC01840', 'score': 10.7}, {'connected_gene': 'EIF4G1', 'score': 10.56}, {'connected_gene': 'LINC01839', 'score': 5.76}, {'connected_gene': 'HTR3D', 'score': 1.38}, {'connected_gene': 'LOC105374252', 'score': 0.37}]
chr3	GH03I184005	184005573	184007200	1.11	[{'connected_gene': 'ABCC5-AS1', 'score': 550.77}, {'connected_gene': 'ABCC5', 'score': 13.99}, {'connected_gene': 'EEF1A1P8', 'score': 11.23}, {'connected_gene': 'HTR3D', 'score': 11.21}, {'connected_gene': 'HTR3C', 'score': 10.07}, {'connected_gene': 'PARL', 'score': 9.73}, {'connected_gene': 'RPSAP31', 'score': 9.73}, {'connected_gene': 'EIF2B5', 'score': 9.36}, {'connected_gene': 'CAMK2N2', 'score': 8.97}, {'connected_gene': 'MAP6D1', 'score': 5.03}]
chr3	GH03I184008	184008001	184008200	0.43	[{'connected_gene': 'ABCC5-AS1', 'score': 550.77}, {'connected_gene': 'ABCC5', 'score': 13.93}, {'connected_gene': 'HTR3D', 'score': 11.07}, {'connected_gene': 'HTR3C', 'score': 10.21}, {'connected_gene': 'EIF2B5', 'score': 9.7}, {'connected_gene': 'CAMK2N2', 'score': 9.56}]
chr3	GH03I184002	184002503	184005296	0.58	[{'connected_gene': 'ABCC5', 'score': 13.73}, {'connected_gene': 'EEF1A1P8', 'score': 11.2}, {'connected_gene': 'HTR3D', 'score': 11.17}, {'connected_gene': 'CAMK2N2', 'score': 8.65}, {'connected_gene': 'MAP6D1', 'score': 5.51}, {'connected_gene': 'ABCC5-AS1', 'score': 0.77}, {'connected_gene': 'PIR62380', 'score': 0.18}]