PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000506087	[[165999571, 166000948], [166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166103693, 166103780], [166129590, 166129701]]	[[166000809, 166000948], [166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166103693, 166103708]]
ENST00000306480	[[165995573, 166000948], [166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166033898, 166034071]]	[[166000809, 166000948], [166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166033898, 166033925]]
ENST00000505095	[[166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166032800, 166032831], [166033898, 166034006]]	[[166006737, 166006840], [166009619, 166009754], [166021779, 166021795]]
NM_001100389	[[165997229, 166000948], [166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166033898, 166034024]]	[[166000809, 166000948], [166006737, 166006840], [166009619, 166009754], [166021779, 166022044], [166024101, 166024248], [166033898, 166033925]]

Promoter

Chrom	Start	End	Description
chr4	166033973	166033999	CAGE_peak_2_at_TMEM192_5end
chr4	166034004	166034026	CAGE_peak_1_at_TMEM192_5end
chr4	166034029	166034045	CAGE_peak_3_at_TMEM192_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I165323	165323078	165331128	2.49	[{'connected_gene': 'MSMO1', 'score': 550.77}, {'connected_gene': 'KLHL2', 'score': 39.23}, {'connected_gene': 'TMEM192', 'score': 10.87}, {'connected_gene': 'NACA3P', 'score': 10.44}, {'connected_gene': 'CPE', 'score': 5.18}, {'connected_gene': 'GC04M165293', 'score': 0.29}]
chr4	GH04I165111	165111800	165114141	2.02	[{'connected_gene': 'TMEM192', 'score': 567.85}, {'connected_gene': 'KLHL2', 'score': 16.25}, {'connected_gene': 'TLL1', 'score': 10.57}, {'connected_gene': 'TRIM75P', 'score': 0.23}]
chr4	GH04I165257	165257201	165257600	0.2	[{'connected_gene': 'TMEM192', 'score': 12.36}, {'connected_gene': 'KLHL2', 'score': 12.36}, {'connected_gene': 'MSMO1', 'score': 11.36}, {'connected_gene': 'RNU4-87P', 'score': 0.77}, {'connected_gene': 'GK3P', 'score': 0.34}]
chr4	GH04I165206	165206353	165208801	1.86	[{'connected_gene': 'TMEM192', 'score': 550.77}, {'connected_gene': 'KLHL2', 'score': 550.77}, {'connected_gene': 'TRIM75P', 'score': 0.11}]
chr4	GH04I165203	165203801	165204837	0.59	[{'connected_gene': 'TMEM192', 'score': 0.77}, {'connected_gene': 'KLHL2', 'score': 0.77}, {'connected_gene': 'TRIM75P', 'score': 0.11}]
chr4	GH04I165209	165209832	165209891	0.5	[{'connected_gene': 'TMEM192', 'score': 550.77}, {'connected_gene': 'KLHL2', 'score': 550.77}, {'connected_gene': 'GC04P165222', 'score': 0.39}]
chr4	GH04I165210	165210001	165210200	0.2	[{'connected_gene': 'TMEM192', 'score': 550.77}, {'connected_gene': 'KLHL2', 'score': 0.77}, {'connected_gene': 'GC04P165222', 'score': 0.39}]
chr4	GH04I165214	165214402	165216399	0.83	[{'connected_gene': 'KLHL2', 'score': 38.89}, {'connected_gene': 'MSMO1', 'score': 10.83}, {'connected_gene': 'TMEM192', 'score': 0.44}, {'connected_gene': 'GC04P165222', 'score': 0.44}]
chr4	GH04I165132	165132983	165133862	0.4	[{'connected_gene': 'KLHL2', 'score': 11.92}, {'connected_gene': 'TMEM192', 'score': 11.91}, {'connected_gene': 'MSMO1', 'score': 10.57}, {'connected_gene': 'TRIM75P', 'score': 0.19}]
chr4	GH04I165255	165255001	165256782	0.89	[{'connected_gene': 'KLHL2', 'score': 49.41}, {'connected_gene': 'TMEM192', 'score': 12.36}, {'connected_gene': 'MSMO1', 'score': 11.36}, {'connected_gene': 'RNU4-87P', 'score': 0.77}, {'connected_gene': 'GK3P', 'score': 0.34}]
chr4	GH04I165211	165210539	165210598	0.73	[{'connected_gene': 'KLHL2', 'score': 550.77}, {'connected_gene': 'TMEM192', 'score': 0.77}, {'connected_gene': 'GC04P165222', 'score': 0.39}]