PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000295834	[[88422509, 88422623], [88424012, 88424105], [88425694, 88425867], [88427469, 88427635]]	[[88422572, 88422623], [88424012, 88424105], [88425694, 88425867], [88427469, 88427536]]
ENST00000393750	[[88422538, 88424105], [88425694, 88425867], [88427469, 88427568]]	[[88423970, 88424105], [88425694, 88425867], [88427469, 88427536]]
ENST00000495375	[[88422547, 88424105], [88425694, 88425867], [88426003, 88426265], [88427469, 88427560]]	None
ENST00000472846	[[88425430, 88425867], [88427469, 88427578]]	None
NM_001443	[[88422500, 88422623], [88424012, 88424105], [88425694, 88425867], [88427469, 88427650]]	[[88422572, 88422623], [88424012, 88424105], [88425694, 88425867], [88427469, 88427536]]

Promoter

Chrom	Start	End	Description
chr2	88427571	88427590	CAGE_peak_1_at_FABP1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I088143	88143122	88143718	0.2	[{'connected_gene': 'THNSL2', 'score': 43.97}, {'connected_gene': 'KRCC1', 'score': 11.09}, {'connected_gene': 'GC02P088146', 'score': 0.77}, {'connected_gene': 'FABP1', 'score': 0.37}, {'connected_gene': 'LOC101928347', 'score': 0.31}]
chr2	GH02I088099	88099862	88100151	0.62	[{'connected_gene': 'THNSL2', 'score': 10.77}, {'connected_gene': 'RPIA', 'score': 4.01}, {'connected_gene': 'MIR4780', 'score': 0.37}, {'connected_gene': 'FABP1', 'score': 0.31}, {'connected_gene': 'SMYD1', 'score': 0.29}]
chr2	GH02I088160	88160002	88160151	1.07	[{'connected_gene': 'THNSL2', 'score': 82.5}, {'connected_gene': 'FABP1', 'score': 11.07}, {'connected_gene': 'GC02P088146', 'score': 0.39}, {'connected_gene': 'LOC101928347', 'score': 0.39}]
chr2	GH02I088123	88123178	88124872	0.38	[{'connected_gene': 'THNSL2', 'score': 10.28}, {'connected_gene': 'FABP1', 'score': 6.92}, {'connected_gene': 'MIR4780', 'score': 0.26}]
chr2	GH02I088121	88121634	88123083	0.62	[{'connected_gene': 'THNSL2', 'score': 11.47}, {'connected_gene': 'FABP1', 'score': 6.81}, {'connected_gene': 'MIR4780', 'score': 0.28}]
chr2	GH02I088169	88169639	88171376	1.52	[{'connected_gene': 'THNSL2', 'score': 629.54}, {'connected_gene': 'LOC101928347', 'score': 550.77}, {'connected_gene': 'FABP1', 'score': 17.77}]
chr2	GH02I088125	88125626	88132346	1.64	[{'connected_gene': 'FABP1', 'score': 586.12}, {'connected_gene': 'THNSL2', 'score': 33.84}, {'connected_gene': 'KRCC1', 'score': 9.87}, {'connected_gene': 'GC02P088146', 'score': 0.37}]
chr2	GH02I088074	88074255	88075673	0.97	[{'connected_gene': 'FABP1', 'score': 15.88}, {'connected_gene': 'THNSL2', 'score': 11.41}, {'connected_gene': 'SMYD1', 'score': 4.43}, {'connected_gene': 'MIR4780', 'score': 0.44}]
chr2	GH02I088066	88066229	88069832	1.13	[{'connected_gene': 'SMYD1', 'score': 556.94}, {'connected_gene': 'GC02M088051', 'score': 550.77}, {'connected_gene': 'FABP1', 'score': 11.56}, {'connected_gene': 'THNSL2', 'score': 11.41}, {'connected_gene': 'MIR4780', 'score': 0.39}]
chr2	GH02I088144	88144086	88147117	0.89	[{'connected_gene': 'GC02P088146', 'score': 550.77}, {'connected_gene': 'THNSL2', 'score': 38.08}, {'connected_gene': 'FABP1', 'score': 20.04}, {'connected_gene': 'KRCC1', 'score': 11.09}, {'connected_gene': 'LOC101928347', 'score': 0.34}]