PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000330194	[[63422718, 63422923], [63440900, 63441070], [63445798, 63445943], [63450306, 63450379], [63519816, 63519939], [63520620, 63520761], [63525696, 63526524]]	[[63441000, 63441070], [63445798, 63445943], [63450306, 63450379], [63519816, 63519939], [63520620, 63520761], [63525696, 63525771]]
ENST00000389639	[[63422754, 63422790], [63445798, 63445943], [63450306, 63450378]]	[[63445806, 63445943], [63450306, 63450378]]

Promoter

Chrom	Start	End	Description
chr10	63422678	63422694	CAGE_peak_2_at_C10orf107_5end
chr10	63422695	63422725	CAGE_peak_1_at_C10orf107_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I061588	61588843	61589032	0.93	[{'connected_gene': 'RHOBTB1', 'score': 5.2}, {'connected_gene': 'CABCOCO1', 'score': 0.19}, {'connected_gene': 'GC10M061462', 'score': 0.16}, {'connected_gene': 'GC10P061456', 'score': 0.12}]
chr10	GH10I061803	61803636	61805364	0.77	[{'connected_gene': 'RHOBTB1', 'score': 5.28}, {'connected_gene': 'CABCOCO1', 'score': 4.86}, {'connected_gene': 'ENSG00000233643', 'score': 0.37}, {'connected_gene': 'GC10P061754', 'score': 0.25}]
chr10	GH10I061759	61759084	61766541	1.45	[{'connected_gene': 'ARID5B', 'score': 21.72}, {'connected_gene': 'CABCOCO1', 'score': 6.26}, {'connected_gene': 'GC10P061754', 'score': 0.44}, {'connected_gene': 'ENSG00000233643', 'score': 0.22}]
chr10	GH10I061829	61829844	61831574	1.58	[{'connected_gene': 'TMEM26', 'score': 13.6}, {'connected_gene': 'CABCOCO1', 'score': 8.07}, {'connected_gene': 'ARID5B', 'score': 1.94}, {'connected_gene': 'ENSG00000233643', 'score': 0.44}]
chr10	GH10I061390	61390700	61391517	0.81	[{'connected_gene': 'TMEM26', 'score': 9.65}, {'connected_gene': 'CABCOCO1', 'score': 8.0}, {'connected_gene': 'GC10M061433', 'score': 0.23}, {'connected_gene': 'GC10P061339', 'score': 0.23}]
chr10	GH10I061175	61175423	61175572	0.2	[{'connected_gene': 'CABCOCO1', 'score': 10.33}, {'connected_gene': 'RHOBTB1', 'score': 9.94}, {'connected_gene': 'GC10P061226', 'score': 0.23}, {'connected_gene': 'LOC105378323', 'score': 0.18}]
chr10	GH10I061783	61783749	61785196	0.7	[{'connected_gene': 'CABCOCO1', 'score': 21.95}, {'connected_gene': 'ARID5B', 'score': 10.53}, {'connected_gene': 'GC10P061754', 'score': 0.31}, {'connected_gene': 'ENSG00000233643', 'score': 0.28}]
chr10	GH10I061832	61832245	61840695	1.77	[{'connected_gene': 'CABCOCO1', 'score': 8.73}, {'connected_gene': 'ENSG00000233643', 'score': 0.37}, {'connected_gene': 'ARID5B', 'score': 0.21}]
chr10	GH10I061845	61845222	61846549	0.63	[{'connected_gene': 'CABCOCO1', 'score': 4.75}, {'connected_gene': 'ENSG00000233643', 'score': 0.34}, {'connected_gene': 'ARID5B', 'score': 0.22}]
chr10	GH10I061448	61448255	61448634	0.34	[{'connected_gene': 'CABCOCO1', 'score': 7.19}, {'connected_gene': 'TMEM26', 'score': 6.07}, {'connected_gene': 'ARID5B', 'score': 2.42}, {'connected_gene': 'GC10M061433', 'score': 0.77}, {'connected_gene': 'TMEM26-AS1', 'score': 0.77}]
chr10	GH10I061487	61487189	61488076	0.57	[{'connected_gene': 'CABCOCO1', 'score': 6.93}, {'connected_gene': 'TMEM26', 'score': 5.12}, {'connected_gene': 'GC10M061462', 'score': 0.39}, {'connected_gene': 'TMEM26-AS1', 'score': 0.29}, {'connected_gene': 'GC10P061456', 'score': 0.29}]
chr10	GH10I061746	61746425	61750407	0.74	[{'connected_gene': 'CABCOCO1', 'score': 14.08}, {'connected_gene': 'TMEM26', 'score': 4.74}, {'connected_gene': 'GC10P061754', 'score': 0.44}, {'connected_gene': 'ENSG00000272592', 'score': 0.21}]
chr10	GH10I061622	61622829	61624639	0.82	[{'connected_gene': 'CABCOCO1', 'score': 24.53}, {'connected_gene': 'TMEM26-AS1', 'score': 10.54}, {'connected_gene': 'TMEM26', 'score': 10.54}, {'connected_gene': 'GC10M061462', 'score': 0.13}]
chr10	GH10I061479	61479939	61480067	0.22	[{'connected_gene': 'CABCOCO1', 'score': 2.47}, {'connected_gene': 'GC10M061462', 'score': 0.37}, {'connected_gene': 'GC10P061456', 'score': 0.34}, {'connected_gene': 'TMEM26-AS1', 'score': 0.31}]
chr10	GH10I061486	61486863	61487012	0.64	[{'connected_gene': 'CABCOCO1', 'score': 6.93}, {'connected_gene': 'GC10M061462', 'score': 0.39}, {'connected_gene': 'TMEM26-AS1', 'score': 0.29}, {'connected_gene': 'GC10P061456', 'score': 0.29}]
chr10	GH10I061791	61791000	61791972	0.46	[{'connected_gene': 'CABCOCO1', 'score': 10.03}, {'connected_gene': 'ENSG00000233643', 'score': 0.31}, {'connected_gene': 'GC10P061754', 'score': 0.28}]
chr10	GH10I061793	61793063	61793212	0.58	[{'connected_gene': 'CABCOCO1', 'score': 10.02}, {'connected_gene': 'ENSG00000233643', 'score': 0.31}, {'connected_gene': 'GC10P061754', 'score': 0.28}]
chr10	GH10I061757	61757113	61758800	1.28	[{'connected_gene': 'CABCOCO1', 'score': 35.71}, {'connected_gene': 'GC10P061754', 'score': 0.77}, {'connected_gene': 'ENSG00000233643', 'score': 0.21}]
chr10	GH10I061705	61705256	61705867	0.46	[{'connected_gene': 'CABCOCO1', 'score': 11.5}, {'connected_gene': 'ENSG00000272592', 'score': 0.34}, {'connected_gene': 'GC10P061754', 'score': 0.25}]
chr10	GH10I061808	61808517	61809421	0.2	[{'connected_gene': 'CABCOCO1', 'score': 4.67}, {'connected_gene': 'ENSG00000233643', 'score': 0.39}, {'connected_gene': 'GC10P061754', 'score': 0.23}]
chr10	GH10I061750	61750548	61754089	1.34	[{'connected_gene': 'CABCOCO1', 'score': 24.8}, {'connected_gene': 'GC10P061754', 'score': 0.77}, {'connected_gene': 'ENSG00000272592', 'score': 0.2}]
chr10	GH10I061786	61785323	61785472	0.66	[{'connected_gene': 'CABCOCO1', 'score': 10.03}, {'connected_gene': 'GC10P061754', 'score': 0.29}, {'connected_gene': 'ENSG00000233643', 'score': 0.28}]
chr10	GH10I061589	61589983	61590132	0.2	[{'connected_gene': 'CABCOCO1', 'score': 17.04}, {'connected_gene': 'GC10M061462', 'score': 0.16}, {'connected_gene': 'GC10P061456', 'score': 0.12}]
chr10	GH10I061590	61589723	61589872	0.38	[{'connected_gene': 'CABCOCO1', 'score': 0.19}, {'connected_gene': 'GC10M061462', 'score': 0.16}, {'connected_gene': 'GC10P061456', 'score': 0.12}]
chr10	GH10I061794	61793472	61795526	1.12	[{'connected_gene': 'CABCOCO1', 'score': 8.08}, {'connected_gene': 'ENSG00000233643', 'score': 0.31}, {'connected_gene': 'GC10P061754', 'score': 0.28}]
chr10	GH10I061785	61785603	61787858	1.21	[{'connected_gene': 'CABCOCO1', 'score': 10.03}, {'connected_gene': 'ENSG00000233643', 'score': 0.29}, {'connected_gene': 'GC10P061754', 'score': 0.29}]
chr10	GH10I061627	61627496	61630121	1.06	[{'connected_gene': 'CABCOCO1', 'score': 20.26}, {'connected_gene': 'GC10M061462', 'score': 0.12}]
chr10	GH10I061634	61633251	61633515	0.2	[{'connected_gene': 'CABCOCO1', 'score': 0.31}, {'connected_gene': 'GC10M061462', 'score': 0.12}]
chr10	GH10I061612	61612483	61612632	0.74	[{'connected_gene': 'CABCOCO1', 'score': 0.23}, {'connected_gene': 'GC10M061462', 'score': 0.14}]
chr10	GH10I061642	61642196	61644609	0.93	[{'connected_gene': 'CABCOCO1', 'score': 0.37}, {'connected_gene': 'GC10M061462', 'score': 0.11}]
chr10	GH10I061633	61633783	61634012	0.67	[{'connected_gene': 'CABCOCO1', 'score': 0.31}, {'connected_gene': 'GC10M061462', 'score': 0.12}]
chr10	GH10I061662	61662601	61663429	1.6	[{'connected_gene': 'CABCOCO1', 'score': 591.98}, {'connected_gene': 'ENSG00000272592', 'score': 0.34}]
chr10	GH10I061621	61621043	61621192	0.2	[{'connected_gene': 'CABCOCO1', 'score': 10.81}, {'connected_gene': 'GC10M061462', 'score': 0.13}]
chr10	GH10I061635	61634603	61636752	0.85	[{'connected_gene': 'CABCOCO1', 'score': 33.66}, {'connected_gene': 'GC10M061462', 'score': 0.12}]
chr10	GH10I061671	61671373	61671510	0.35	[{'connected_gene': 'CABCOCO1', 'score': 32.85}, {'connected_gene': 'ENSG00000272592', 'score': 0.39}]
chr10	GH10I061632	61632403	61632552	0.78	[{'connected_gene': 'CABCOCO1', 'score': 0.29}, {'connected_gene': 'GC10M061462', 'score': 0.12}]
chr10	GH10I061397	61397068	61398599	0.83	[{'connected_gene': 'TMEM26-AS1', 'score': 11.61}, {'connected_gene': 'TMEM26', 'score': 11.6}, {'connected_gene': 'CABCOCO1', 'score': 8.0}, {'connected_gene': 'GC10M061433', 'score': 0.25}, {'connected_gene': 'GC10P061339', 'score': 0.22}]
chr10	GH10I061755	61755183	61755332	0.51	[{'connected_gene': 'GC10P061754', 'score': 550.77}, {'connected_gene': 'ENSG00000233643', 'score': 0.2}, {'connected_gene': 'CABCOCO1', 'score': 0.16}]