PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000335350	[[72972326, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73048714, 73048747], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73062621]]	[[72972742, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73048714, 73048747], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73059034]]
ENST00000373192	[[72972683, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73062621]]	[[72972742, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73059034]]
NM_001244889	[[72972291, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73062635]]	[[72972742, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73059034]]
NM_170744	[[72972291, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73048714, 73048747], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73062635]]	[[72972742, 72972821], [73039577, 73039802], [73044476, 73044620], [73045082, 73045186], [73046445, 73046626], [73047354, 73047522], [73048324, 73048489], [73048714, 73048747], [73050671, 73050866], [73051188, 73051578], [73052223, 73052311], [73053161, 73053330], [73053456, 73053690], [73055567, 73055717], [73056334, 73056499], [73057665, 73057847], [73058868, 73059034]]

Promoter

Chrom	Start	End	Description
chr10	72972281	72972336	CAGE_peak_1_at_UNC5B_5end
chr10	72972434	72972441	CAGE_peak_3_at_UNC5B_5end
chr10	72972487	72972494	CAGE_peak_2_at_UNC5B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I071215	71215773	71218913	1.64	[{'connected_gene': 'UNC5B-AS1', 'score': 557.01}, {'connected_gene': 'UNC5B', 'score': 0.77}]
chr10	GH10I071228	71228604	71231072	0.7	[{'connected_gene': 'SLC29A3', 'score': 9.74}, {'connected_gene': 'PIR59347', 'score': 0.44}, {'connected_gene': 'UNC5B-AS1', 'score': 0.39}, {'connected_gene': 'UNC5B', 'score': 0.37}]
chr10	GH10I071289	71289654	71290361	0.38	[{'connected_gene': 'SLC29A3', 'score': 11.08}, {'connected_gene': 'PCBD1', 'score': 10.6}, {'connected_gene': 'GC10P071300', 'score': 0.39}, {'connected_gene': 'PIR34735', 'score': 0.37}, {'connected_gene': 'UNC5B', 'score': 0.18}]
chr10	GH10I071285	71285204	71285353	0.83	[{'connected_gene': 'SLC29A3', 'score': 11.06}, {'connected_gene': 'PCBD1', 'score': 10.6}, {'connected_gene': 'PIR34735', 'score': 0.39}, {'connected_gene': 'GC10P071300', 'score': 0.39}, {'connected_gene': 'UNC5B', 'score': 0.19}]
chr10	GH10I071279	71279345	71279537	0.69	[{'connected_gene': 'SLC29A3', 'score': 11.05}, {'connected_gene': 'UNC5B', 'score': 10.66}, {'connected_gene': 'PIR34735', 'score': 0.44}, {'connected_gene': 'GC10P071300', 'score': 0.34}]
chr10	GH10I071220	71220368	71221707	0.64	[{'connected_gene': 'PCBD1', 'score': 9.7}, {'connected_gene': 'UNC5B-AS1', 'score': 7.27}, {'connected_gene': 'UNC5B', 'score': 0.44}, {'connected_gene': 'PIR59347', 'score': 0.37}]
chr10	GH10I071222	71222471	71223552	0.94	[{'connected_gene': 'PCBD1', 'score': 9.7}, {'connected_gene': 'UNC5B-AS1', 'score': 0.77}, {'connected_gene': 'UNC5B', 'score': 0.39}, {'connected_gene': 'PIR59347', 'score': 0.37}]
chr10	GH10I071223	71223697	71226042	0.81	[{'connected_gene': 'PCBD1', 'score': 10.15}, {'connected_gene': 'UNC5B-AS1', 'score': 0.44}, {'connected_gene': 'UNC5B', 'score': 0.39}, {'connected_gene': 'PIR59347', 'score': 0.39}]
chr10	GH10I070970	70970944	70971153	0.31	[{'connected_gene': 'PCBD1', 'score': 10.38}, {'connected_gene': 'UNC5B', 'score': 10.37}, {'connected_gene': 'LOC105378350', 'score': 0.44}, {'connected_gene': 'LOC105378349', 'score': 0.29}]
chr10	GH10I071212	71212064	71214797	2.49	[{'connected_gene': 'UNC5B', 'score': 558.25}, {'connected_gene': 'SGPL1', 'score': 12.24}, {'connected_gene': 'UNC5B-AS1', 'score': 0.77}]
chr10	GH10I071262	71262370	71264872	1.09	[{'connected_gene': 'UNC5B', 'score': 23.6}, {'connected_gene': 'UNC5B-AS1', 'score': 11.54}, {'connected_gene': 'CDH23', 'score': 10.13}, {'connected_gene': 'PIR34735', 'score': 0.44}, {'connected_gene': 'PIR59347', 'score': 0.31}]
chr10	GH10I071259	71259472	71261487	1.15	[{'connected_gene': 'UNC5B', 'score': 21.29}, {'connected_gene': 'UNC5B-AS1', 'score': 11.55}, {'connected_gene': 'CDH23', 'score': 10.13}, {'connected_gene': 'PIR34735', 'score': 0.39}, {'connected_gene': 'PIR59347', 'score': 0.34}]
chr10	GH10I071258	71258716	71259121	0.31	[{'connected_gene': 'UNC5B', 'score': 22.0}, {'connected_gene': 'UNC5B-AS1', 'score': 11.55}, {'connected_gene': 'CDH23', 'score': 10.13}, {'connected_gene': 'PIR34735', 'score': 0.39}, {'connected_gene': 'PIR59347', 'score': 0.34}]
chr10	GH10I071265	71265234	71272946	1.7	[{'connected_gene': 'UNC5B', 'score': 13.37}, {'connected_gene': 'UNC5B-AS1', 'score': 11.52}, {'connected_gene': 'SLC29A3', 'score': 10.8}, {'connected_gene': 'CDH23-AS1', 'score': 10.18}, {'connected_gene': 'CDH23', 'score': 10.18}, {'connected_gene': 'PCBD1', 'score': 9.89}, {'connected_gene': 'PIR34735', 'score': 0.77}, {'connected_gene': 'PIR59347', 'score': 0.29}]
chr10	GH10I071251	71251563	71257183	1.15	[{'connected_gene': 'UNC5B', 'score': 24.67}, {'connected_gene': 'UNC5B-AS1', 'score': 11.61}, {'connected_gene': 'PCBD1', 'score': 10.25}, {'connected_gene': 'CDH23', 'score': 10.12}, {'connected_gene': 'PIR59347', 'score': 0.37}, {'connected_gene': 'PIR34735', 'score': 0.37}]
chr10	GH10I071231	71231860	71237179	1.57	[{'connected_gene': 'UNC5B', 'score': 37.82}, {'connected_gene': 'UNC5B-AS1', 'score': 12.44}, {'connected_gene': 'PCBD1', 'score': 10.2}, {'connected_gene': 'SLC29A3', 'score': 9.75}, {'connected_gene': 'C10orf105', 'score': 2.25}, {'connected_gene': 'PIR59347', 'score': 0.77}]
chr10	GH10I071240	71240190	71242976	1.15	[{'connected_gene': 'UNC5B', 'score': 29.48}, {'connected_gene': 'UNC5B-AS1', 'score': 22.29}, {'connected_gene': 'PCBD1', 'score': 10.48}, {'connected_gene': 'PIR59347', 'score': 0.77}, {'connected_gene': 'PIR34735', 'score': 0.29}]
chr10	GH10I071243	71243320	71249902	1.24	[{'connected_gene': 'UNC5B', 'score': 26.31}, {'connected_gene': 'UNC5B-AS1', 'score': 22.29}, {'connected_gene': 'PCBD1', 'score': 10.48}, {'connected_gene': 'PIR59347', 'score': 0.44}, {'connected_gene': 'PIR34735', 'score': 0.31}]
chr10	GH10I071283	71283338	71285107	0.6	[{'connected_gene': 'UNC5B', 'score': 16.48}, {'connected_gene': 'SLC29A3', 'score': 11.05}, {'connected_gene': 'PCBD1', 'score': 10.6}, {'connected_gene': 'PIR34735', 'score': 0.39}, {'connected_gene': 'GC10P071300', 'score': 0.37}]
chr10	GH10I071307	71307255	71308792	0.6	[{'connected_gene': 'UNC5B', 'score': 10.17}, {'connected_gene': 'PCBD1', 'score': 9.31}, {'connected_gene': 'SLC29A3', 'score': 7.63}, {'connected_gene': 'GC10P071300', 'score': 0.44}]
chr10	GH10I071036	71036324	71036473	0.38	[{'connected_gene': 'UNC5B', 'score': 10.5}, {'connected_gene': 'PCBD1', 'score': 9.94}, {'connected_gene': 'LOC105378351', 'score': 0.29}, {'connected_gene': 'PIR52978', 'score': 0.13}]
chr10	GH10I071250	71250093	71251244	0.57	[{'connected_gene': 'UNC5B', 'score': 25.85}, {'connected_gene': 'PCBD1', 'score': 10.25}, {'connected_gene': 'PIR59347', 'score': 0.39}, {'connected_gene': 'PIR34735', 'score': 0.34}]
chr10	GH10I071025	71025704	71025813	0.54	[{'connected_gene': 'UNC5B', 'score': 10.63}, {'connected_gene': 'LOC105378351', 'score': 0.37}, {'connected_gene': 'PIR52978', 'score': 0.12}]
chr10	GH10I071125	71125044	71125193	0.31	[{'connected_gene': 'UNC5B', 'score': 10.57}, {'connected_gene': 'PIR52978', 'score': 0.29}, {'connected_gene': 'LOC105378351', 'score': 0.13}]
chr10	GH10I071136	71136304	71136553	0.31	[{'connected_gene': 'UNC5B', 'score': 11.19}, {'connected_gene': 'PIR52978', 'score': 0.37}, {'connected_gene': 'LOC105378351', 'score': 0.12}]
chr10	GH10I070941	70941284	70941359	0.46	[{'connected_gene': 'UNC5B', 'score': 10.54}, {'connected_gene': 'LOC105378349', 'score': 0.77}, {'connected_gene': 'LOC105378350', 'score': 0.28}]
chr10	GH10I071278	71278964	71279153	0.72	[{'connected_gene': 'UNC5B', 'score': 11.16}, {'connected_gene': 'PIR34735', 'score': 0.44}, {'connected_gene': 'GC10P071300', 'score': 0.34}]
chr10	GH10I071187	71187744	71187873	0.31	[{'connected_gene': 'UNC5B', 'score': 11.69}, {'connected_gene': 'PIR52978', 'score': 0.29}]
chr10	GH10I071176	71176724	71176913	0.46	[{'connected_gene': 'UNC5B', 'score': 11.02}, {'connected_gene': 'PIR52978', 'score': 0.34}]
chr10	GH10I071208	71208938	71209793	1.11	[{'connected_gene': 'UNC5B', 'score': 0.77}, {'connected_gene': 'PIR52978', 'score': 0.23}]
chr10	GH10I071299	71299201	71299800	0.31	[{'connected_gene': 'GC10P071300', 'score': 550.77}, {'connected_gene': 'CDH23', 'score': 10.98}, {'connected_gene': 'UNC5B', 'score': 10.71}, {'connected_gene': 'PCBD1', 'score': 9.89}, {'connected_gene': 'SLC29A3', 'score': 5.13}, {'connected_gene': 'PIR34735', 'score': 0.31}]