PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000450904	[[68658743, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668002, 68668073], [68671190, 68671254]]	[[68658798, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664123]]
ENST00000362034	[[68658743, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668015, 68668073], [68671190, 68671288]]	[[68658798, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668015, 68668073], [68671190, 68671278]]
ENST00000565125	[[68658746, 68660461], [68660789, 68660923], [68663982, 68664146], [68665394, 68665480], [68668002, 68668073], [68671190, 68671303]]	[[68668011, 68668073], [68671190, 68671278]]
ENST00000541279	[[68658750, 68658863], [68660357, 68660461], [68660789, 68660923], [68663982, 68664146], [68665394, 68665480], [68668015, 68668073], [68671190, 68671295]]	[[68660866, 68660923], [68663982, 68664146], [68665394, 68665480], [68668015, 68668073], [68671190, 68671278]]
ENST00000567045	[[68659959, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668002, 68668073], [68671190, 68671246]]	[[68660067, 68660461], [68660870, 68660923], [68663982, 68664123]]
ENST00000544567	[[68660362, 68660461], [68660870, 68660923], [68663982, 68664306], [68665394, 68665480], [68671190, 68671282]]	[[68665457, 68665480], [68671190, 68671278]]
ENST00000541265	[[68660436, 68660461], [68660870, 68660923], [68663936, 68664146], [68665394, 68665480], [68668002, 68668073], [68671190, 68671300]]	[[68668011, 68668073], [68671190, 68671278]]
ENST00000536637	[[68665061, 68665480], [68668015, 68668073], [68671190, 68671270]]	None
NM_181515	[[68658745, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668002, 68668073], [68671190, 68671303]]	[[68658798, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664123]]
NM_181514	[[68658745, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668015, 68668073], [68671190, 68671303]]	[[68658798, 68658863], [68660357, 68660461], [68660870, 68660923], [68663982, 68664146], [68665394, 68665480], [68668015, 68668073], [68671190, 68671278]]

Promoter

Chrom	Start	End	Description
chr11	68671244	68671253	CAGE_peak_2_at_MRPL21_5end
chr11	68671264	68671311	CAGE_peak_1_at_MRPL21_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I068693	68693895	68695430	0.31	[{'connected_gene': 'TESMIN', 'score': 22.85}, {'connected_gene': 'GAL', 'score': 11.27}, {'connected_gene': 'IGHMBP2', 'score': 10.08}, {'connected_gene': 'MRPL21', 'score': 10.08}]
chr11	GH11I068817	68816059	68816073	0.22	[{'connected_gene': 'TESMIN', 'score': 14.53}, {'connected_gene': 'IGHMBP2', 'score': 11.95}, {'connected_gene': 'MRPL21', 'score': 11.95}, {'connected_gene': 'GC11P068804', 'score': 0.39}, {'connected_gene': 'CPT1A', 'score': 0.31}]
chr11	GH11I068002	68002100	68005240	1.97	[{'connected_gene': 'UNC93B1', 'score': 563.35}, {'connected_gene': 'NDUFS8', 'score': 10.63}, {'connected_gene': 'ENSG00000255031', 'score': 8.97}, {'connected_gene': 'ALDH3B1', 'score': 8.7}, {'connected_gene': 'MRPL21', 'score': 5.51}, {'connected_gene': 'GC11M068005', 'score': 0.44}, {'connected_gene': 'OR7E1P', 'score': 0.31}]
chr11	GH11I068651	68651633	68651782	0.2	[{'connected_gene': 'GAL', 'score': 11.86}, {'connected_gene': 'TESMIN', 'score': 11.0}, {'connected_gene': 'IGHMBP2', 'score': 9.42}, {'connected_gene': 'MRPL21', 'score': 9.42}, {'connected_gene': 'MRGPRF', 'score': 6.35}, {'connected_gene': 'ENSG00000260808', 'score': 0.29}]
chr11	GH11I068763	68763353	68763502	0.77	[{'connected_gene': 'LRP5', 'score': 10.22}, {'connected_gene': 'IGHMBP2', 'score': 10.08}, {'connected_gene': 'MRPL21', 'score': 10.08}, {'connected_gene': 'PIR47748', 'score': 0.44}, {'connected_gene': 'PIR50743', 'score': 0.39}, {'connected_gene': 'CPT1A', 'score': 0.18}]
chr11	GH11I068813	68813718	68814214	0.31	[{'connected_gene': 'IGHMBP2', 'score': 11.95}, {'connected_gene': 'MRPL21', 'score': 11.95}, {'connected_gene': 'TESMIN', 'score': 11.24}, {'connected_gene': 'GC11P068804', 'score': 0.44}, {'connected_gene': 'CPT1A', 'score': 0.29}]
chr11	GH11I068812	68812416	68813076	0.51	[{'connected_gene': 'IGHMBP2', 'score': 11.94}, {'connected_gene': 'MRPL21', 'score': 11.94}, {'connected_gene': 'TESMIN', 'score': 11.27}, {'connected_gene': 'GC11P068804', 'score': 0.44}, {'connected_gene': 'CPT1A', 'score': 0.29}]
chr11	GH11I068819	68819775	68820112	0.49	[{'connected_gene': 'IGHMBP2', 'score': 11.95}, {'connected_gene': 'MRPL21', 'score': 11.95}, {'connected_gene': 'TESMIN', 'score': 11.23}, {'connected_gene': 'GC11P068804', 'score': 0.37}, {'connected_gene': 'CPT1A', 'score': 0.34}]
chr11	GH11I068818	68817954	68818602	0.54	[{'connected_gene': 'IGHMBP2', 'score': 11.95}, {'connected_gene': 'MRPL21', 'score': 11.95}, {'connected_gene': 'TESMIN', 'score': 11.23}, {'connected_gene': 'GC11P068804', 'score': 0.39}, {'connected_gene': 'CPT1A', 'score': 0.31}]
chr11	GH11I068816	68816933	68817684	0.9	[{'connected_gene': 'IGHMBP2', 'score': 11.95}, {'connected_gene': 'MRPL21', 'score': 11.95}, {'connected_gene': 'TESMIN', 'score': 11.23}, {'connected_gene': 'LOC105369364', 'score': 4.46}, {'connected_gene': 'GC11P068804', 'score': 0.39}, {'connected_gene': 'CPT1A', 'score': 0.31}]
chr11	GH11I069007	69006889	69006910	0.4	[{'connected_gene': 'IGHMBP2', 'score': 10.26}, {'connected_gene': 'MRPL21', 'score': 10.26}, {'connected_gene': 'GAL', 'score': 9.59}, {'connected_gene': 'ORAOV1', 'score': 8.75}, {'connected_gene': 'ENSG00000261276', 'score': 0.77}, {'connected_gene': 'MRGPRF-AS1', 'score': 0.44}, {'connected_gene': 'MRGPRF', 'score': 0.44}]
chr11	GH11I068902	68902977	68905674	2.11	[{'connected_gene': 'IGHMBP2', 'score': 638.16}, {'connected_gene': 'MRPL21', 'score': 558.96}, {'connected_gene': 'ORAOV1', 'score': 42.17}, {'connected_gene': 'KMT5B', 'score': 39.44}, {'connected_gene': 'MRGPRF-AS1', 'score': 21.73}, {'connected_gene': 'MRGPRF', 'score': 20.32}, {'connected_gene': 'LOC105369364', 'score': 19.38}, {'connected_gene': 'PPP6R3', 'score': 19.22}, {'connected_gene': 'ENSG00000260808', 'score': 15.81}, {'connected_gene': 'ENSG00000261625', 'score': 13.05}, {'connected_gene': 'TPCN2', 'score': 11.98}, {'connected_gene': 'ENSG00000255741', 'score': 0.28}]
chr11	GH11I068954	68954800	68956888	1.37	[{'connected_gene': 'IGHMBP2', 'score': 81.81}, {'connected_gene': 'MRPL21', 'score': 4.87}, {'connected_gene': 'TPCN2', 'score': 2.18}, {'connected_gene': 'ENSG00000255741', 'score': 0.39}, {'connected_gene': 'PIR43978', 'score': 0.34}]
chr11	GH11I068872	68872693	68872782	0.43	[{'connected_gene': 'IGHMBP2', 'score': 11.97}, {'connected_gene': 'MRPL21', 'score': 11.97}, {'connected_gene': 'LOC105369364', 'score': 0.77}]
chr11	GH11I068876	68876760	68878570	0.85	[{'connected_gene': 'IGHMBP2', 'score': 26.18}, {'connected_gene': 'MRPL21', 'score': 12.65}, {'connected_gene': 'LOC105369364', 'score': 0.44}]
chr11	GH11I068854	68854255	68858762	1.64	[{'connected_gene': 'IGHMBP2', 'score': 79.48}, {'connected_gene': 'LOC105369364', 'score': 20.69}, {'connected_gene': 'TESMIN', 'score': 12.29}, {'connected_gene': 'MRPL21', 'score': 11.56}, {'connected_gene': 'CPT1A', 'score': 1.94}]
chr11	GH11I068862	68862237	68863028	0.31	[{'connected_gene': 'IGHMBP2', 'score': 82.95}, {'connected_gene': 'LOC105369364', 'score': 21.45}, {'connected_gene': 'MRPL21', 'score': 11.58}, {'connected_gene': 'TESMIN', 'score': 10.98}, {'connected_gene': 'CPT1A', 'score': 0.37}]
chr11	GH11I068889	68889508	68892133	0.94	[{'connected_gene': 'IGHMBP2', 'score': 83.99}, {'connected_gene': 'LOC105369364', 'score': 20.05}, {'connected_gene': 'MRPL21', 'score': 0.39}]
chr11	GH11I068932	68932149	68937096	0.31	[{'connected_gene': 'IGHMBP2', 'score': 102.74}, {'connected_gene': 'LOC105369364', 'score': 18.78}, {'connected_gene': 'MRGPRD', 'score': 11.85}, {'connected_gene': 'MRPL21', 'score': 11.34}, {'connected_gene': 'MRGPRF-AS1', 'score': 11.11}, {'connected_gene': 'MRGPRF', 'score': 11.11}, {'connected_gene': 'ENSG00000255741', 'score': 0.44}]
chr11	GH11I069039	69039400	69039801	0.4	[{'connected_gene': 'IGHMBP2', 'score': 16.24}, {'connected_gene': 'MRGPRF-AS1', 'score': 12.4}, {'connected_gene': 'MRGPRF', 'score': 12.4}, {'connected_gene': 'MRGPRD', 'score': 11.18}, {'connected_gene': 'MRPL21', 'score': 6.62}, {'connected_gene': 'TPCN2', 'score': 0.44}]
chr11	GH11I069307	69307921	69313695	1.3	[{'connected_gene': 'MYEOV', 'score': 8.68}, {'connected_gene': 'TPCN2', 'score': 6.07}, {'connected_gene': 'ENSG00000260877', 'score': 4.97}, {'connected_gene': 'MRPL21', 'score': 4.68}, {'connected_gene': 'PPP6R3', 'score': 4.29}, {'connected_gene': 'IGHMBP2', 'score': 1.29}, {'connected_gene': 'IFITM9P', 'score': 0.44}, {'connected_gene': 'LOC105369370', 'score': 0.39}, {'connected_gene': 'GC11P069370', 'score': 0.22}]
chr11	GH11I069350	69350764	69354252	1.19	[{'connected_gene': 'MYEOV', 'score': 10.87}, {'connected_gene': 'MRPL21', 'score': 4.6}, {'connected_gene': 'GC11P069370', 'score': 0.37}, {'connected_gene': 'IFITM9P', 'score': 0.25}, {'connected_gene': 'LOC105369370', 'score': 0.23}]
chr11	GH11I069054	69054341	69057281	1.5	[{'connected_gene': 'TPCN2', 'score': 21.66}, {'connected_gene': 'IGHMBP2', 'score': 13.19}, {'connected_gene': 'MRGPRF-AS1', 'score': 11.4}, {'connected_gene': 'MRGPRF', 'score': 11.4}, {'connected_gene': 'MRPL21', 'score': 11.0}, {'connected_gene': 'PIR48560', 'score': 0.34}]
chr11	GH11I069048	69048014	69053762	2.39	[{'connected_gene': 'TPCN2', 'score': 568.94}, {'connected_gene': 'MRGPRF-AS1', 'score': 11.41}, {'connected_gene': 'MRGPRF', 'score': 11.41}, {'connected_gene': 'IGHMBP2', 'score': 11.01}, {'connected_gene': 'MRPL21', 'score': 11.01}, {'connected_gene': 'MRGPRD', 'score': 1.6}, {'connected_gene': 'PIR48560', 'score': 0.31}]
chr11	GH11I068810	68810139	68810795	0.43	[{'connected_gene': 'MRPL21', 'score': 15.72}, {'connected_gene': 'IGHMBP2', 'score': 10.59}, {'connected_gene': 'GC11P068804', 'score': 0.44}, {'connected_gene': 'CPT1A', 'score': 0.29}]
chr11	GH11I068836	68836688	68844800	2.29	[{'connected_gene': 'CPT1A', 'score': 550.77}, {'connected_gene': 'IGHMBP2', 'score': 68.29}, {'connected_gene': 'PPP6R3', 'score': 24.5}, {'connected_gene': 'MRGPRF-AS1', 'score': 17.54}, {'connected_gene': 'KMT5B', 'score': 16.02}, {'connected_gene': 'ENSG00000261625', 'score': 15.99}, {'connected_gene': 'ORAOV1', 'score': 15.6}, {'connected_gene': 'MRGPRF', 'score': 14.26}, {'connected_gene': 'ENSG00000260808', 'score': 11.15}, {'connected_gene': 'TPCN2', 'score': 10.64}, {'connected_gene': 'MRPL21', 'score': 4.84}, {'connected_gene': 'GC11P068804', 'score': 0.28}]
chr11	GH11I069006	69006988	69015975	2.36	[{'connected_gene': 'MRGPRF', 'score': 554.8}, {'connected_gene': 'MRGPRF-AS1', 'score': 550.77}, {'connected_gene': 'IGHMBP2', 'score': 45.13}, {'connected_gene': 'ENSG00000261625', 'score': 29.61}, {'connected_gene': 'MRPL21', 'score': 17.0}, {'connected_gene': 'PPP6R3', 'score': 11.65}, {'connected_gene': 'GAL', 'score': 9.58}, {'connected_gene': 'ORAOV1', 'score': 8.75}, {'connected_gene': 'ENSG00000261276', 'score': 0.44}]
chr11	GH11I069037	69037448	69038358	0.2	[{'connected_gene': 'MRGPRF', 'score': 12.42}, {'connected_gene': 'MRGPRF-AS1', 'score': 12.4}, {'connected_gene': 'MRGPRD', 'score': 11.18}, {'connected_gene': 'IGHMBP2', 'score': 8.31}, {'connected_gene': 'MRPL21', 'score': 6.33}, {'connected_gene': 'TPCN2', 'score': 0.39}]
chr11	GH11I068869	68869753	68870801	1.45	[{'connected_gene': 'LOC105369364', 'score': 570.86}, {'connected_gene': 'IGHMBP2', 'score': 79.49}, {'connected_gene': 'MRPL21', 'score': 11.89}, {'connected_gene': 'TESMIN', 'score': 11.1}, {'connected_gene': 'MRGPRF-AS1', 'score': 10.67}, {'connected_gene': 'MRGPRF', 'score': 10.67}, {'connected_gene': 'CPT1A', 'score': 0.31}]
chr11	GH11I069114	69114502	69116492	0.95	[{'connected_gene': 'MRGPRF-AS1', 'score': 10.98}, {'connected_gene': 'MRGPRF', 'score': 10.98}, {'connected_gene': 'ORAOV1', 'score': 10.83}, {'connected_gene': 'IGHMBP2', 'score': 10.27}, {'connected_gene': 'MRPL21', 'score': 10.27}, {'connected_gene': 'TPCN2', 'score': 8.8}, {'connected_gene': 'ENSG00000260895', 'score': 0.39}, {'connected_gene': 'PIR51352', 'score': 0.37}]
chr11	GH11I069105	69105264	69106965	0.94	[{'connected_gene': 'MRGPRF-AS1', 'score': 10.99}, {'connected_gene': 'MRGPRF', 'score': 10.99}, {'connected_gene': 'ORAOV1', 'score': 10.83}, {'connected_gene': 'IGHMBP2', 'score': 10.28}, {'connected_gene': 'MRPL21', 'score': 10.28}, {'connected_gene': 'ENSG00000260895', 'score': 0.77}, {'connected_gene': 'PIR51352', 'score': 0.31}, {'connected_gene': 'TPCN2', 'score': 0.22}]
chr11	GH11I069040	69040126	69041723	1.3	[{'connected_gene': 'MRGPRF-AS1', 'score': 12.4}, {'connected_gene': 'MRGPRF', 'score': 12.4}, {'connected_gene': 'MRGPRD', 'score': 11.18}, {'connected_gene': 'IGHMBP2', 'score': 8.52}, {'connected_gene': 'TPCN2', 'score': 7.39}, {'connected_gene': 'MRPL21', 'score': 7.11}]
chr11	GH11I068997	68997966	69005630	1.18	[{'connected_gene': 'ENSG00000261625', 'score': 579.05}, {'connected_gene': 'IGHMBP2', 'score': 33.72}, {'connected_gene': 'MRPL21', 'score': 17.32}, {'connected_gene': 'GAL', 'score': 9.59}, {'connected_gene': 'ORAOV1', 'score': 9.26}, {'connected_gene': 'MRGPRF-AS1', 'score': 8.64}, {'connected_gene': 'MRGPRD', 'score': 5.74}, {'connected_gene': 'ENSG00000261276', 'score': 0.77}, {'connected_gene': 'MRGPRF', 'score': 0.39}]
chr11	GH11I068941	68941434	68943810	0.78	[{'connected_gene': 'ENSG00000255741', 'score': 550.77}, {'connected_gene': 'IGHMBP2', 'score': 91.67}, {'connected_gene': 'MRPL21', 'score': 12.59}]