PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000382374	[[22066838, 22067492], [22069299, 22069457], [22070190, 22070299], [22077064, 22077236], [22084142, 22084240], [22088491, 22088557], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22178077, 22178353]]	[[22067387, 22067492], [22069299, 22069457], [22070190, 22070299], [22077064, 22077236], [22084142, 22084240], [22088491, 22088557], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22178077, 22178287]]
ENST00000476895	[[22084165, 22084240], [22088491, 22088557], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22157012, 22157062], [22177712, 22177850]]	None
ENST00000469058	[[22084165, 22084240], [22088491, 22088557], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22176882, 22176957], [22178077, 22178304]]	None
ENST00000468222	[[22084221, 22084240], [22088491, 22088557], [22089672, 22089699], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22178077, 22178320]]	[[22084221, 22084240], [22088491, 22088557], [22089672, 22089699], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22178077, 22178287]]
ENST00000479790	[[22066835, 22067492], [22069299, 22070299], [22077064, 22077212]]	None
ENST00000460488	[[22067075, 22067492], [22069299, 22069457], [22077064, 22077237]]	None
ENST00000478700	[[22067242, 22067492], [22069299, 22069457], [22070190, 22070791]]	None
ENST00000480341	[[22076965, 22077236], [22084142, 22084240], [22088491, 22088557], [22089672, 22089800]]	None
NM_152726	[[22066827, 22067492], [22069299, 22069457], [22070190, 22070299], [22077064, 22077236], [22084142, 22084240], [22088491, 22088557], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22178077, 22178355]]	[[22067387, 22067492], [22069299, 22069457], [22070190, 22070299], [22077064, 22077236], [22084142, 22084240], [22088491, 22088557], [22095383, 22095466], [22096741, 22096789], [22113440, 22113516], [22113795, 22113827], [22140935, 22141083], [22178077, 22178287]]

Promoter

Chrom	Start	End	Description
chr13	22178284	22178318	CAGE_peak_1_at_EFHA1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I021511	21511598	21512491	0.2	[{'connected_gene': 'ZDHHC20', 'score': 6.29}, {'connected_gene': 'FNTAP2', 'score': 0.37}, {'connected_gene': 'GC13P021491', 'score': 0.34}, {'connected_gene': 'MICU2', 'score': 0.16}]
chr13	GH13I021464	21464962	21467704	0.68	[{'connected_gene': 'ZDHHC20', 'score': 8.29}, {'connected_gene': 'MICU2', 'score': 5.82}, {'connected_gene': 'HIST1H2BPS3', 'score': 0.37}]
chr13	GH13I021528	21528302	21530188	0.43	[{'connected_gene': 'FNTAP2', 'score': 550.77}, {'connected_gene': 'MICU2', 'score': 7.09}, {'connected_gene': 'GC13P021491', 'score': 0.28}]
chr13	GH13I021522	21522982	21523091	0.74	[{'connected_gene': 'FNTAP2', 'score': 0.44}, {'connected_gene': 'GC13P021491', 'score': 0.29}, {'connected_gene': 'MICU2', 'score': 0.18}]
chr13	GH13I021635	21635676	21638736	1	[{'connected_gene': 'FGF9', 'score': 11.53}, {'connected_gene': 'MICU2', 'score': 5.21}, {'connected_gene': 'RPS7P10', 'score': 0.44}]
chr13	GH13I021583	21583371	21584102	0.74	[{'connected_gene': 'MICU2', 'score': 11.28}, {'connected_gene': 'ZDHHC20', 'score': 4.86}, {'connected_gene': 'GC13M021552', 'score': 0.29}, {'connected_gene': 'RNU6-59P', 'score': 0.29}]
chr13	GH13I021602	21602779	21605050	2.06	[{'connected_gene': 'MICU2', 'score': 557.7}, {'connected_gene': 'GC13M021552', 'score': 0.23}, {'connected_gene': 'RNU6-59P', 'score': 0.23}]
chr13	GH13I021595	21595006	21595921	0.2	[{'connected_gene': 'MICU2', 'score': 0.44}, {'connected_gene': 'GC13M021552', 'score': 0.26}, {'connected_gene': 'RNU6-59P', 'score': 0.26}]
chr13	GH13I021580	21580003	21581561	0.31	[{'connected_gene': 'MICU2', 'score': 7.18}, {'connected_gene': 'GC13M021552', 'score': 0.31}, {'connected_gene': 'RNU6-59P', 'score': 0.31}]
chr13	GH13I021561	21561257	21561544	0.26	[{'connected_gene': 'MICU2', 'score': 2.57}, {'connected_gene': 'GC13M021552', 'score': 0.44}, {'connected_gene': 'RNU6-59P', 'score': 0.44}]
chr13	GH13I022009	22009490	22009842	0.78	[{'connected_gene': 'MICU2', 'score': 1.95}, {'connected_gene': 'LINC00540', 'score': 0.29}, {'connected_gene': 'LINC00424', 'score': 0.12}]
chr13	GH13I021616	21616192	21617597	0.94	[{'connected_gene': 'MICU2', 'score': 9.18}, {'connected_gene': 'RPS7P10', 'score': 0.39}]
chr13	GH13I022060	22060251	22064348	1.39	[{'connected_gene': 'LOC105370108', 'score': 550.77}, {'connected_gene': 'MICU2', 'score': 1.2}, {'connected_gene': 'GC13P022068', 'score': 0.44}, {'connected_gene': 'LINC00540', 'score': 0.34}]
chr13	GH13I021588	21588502	21588651	0.31	[{'connected_gene': 'RNU6-59P', 'score': 11.11}, {'connected_gene': 'MICU2', 'score': 6.36}, {'connected_gene': 'GC13M021552', 'score': 0.28}]
chr13	GH13I021576	21576405	21576868	0.56	[{'connected_gene': 'GC13M021552', 'score': 0.31}, {'connected_gene': 'RNU6-59P', 'score': 0.31}, {'connected_gene': 'MICU2', 'score': 0.31}]