PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000275159	[[121401382, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121491550, 121491673], [121526220, 121526309], [121544381, 121544498], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655576]]	[[121401916, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121491550, 121491673], [121526220, 121526309], [121544381, 121544498], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655576]]
ENST00000464622	[[121401382, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436893], [121447523, 121447607], [121452772, 121452898], [121460919, 121460982], [121481155, 121481249], [121482093, 121482202], [121491550, 121491673], [121513520, 121513688], [121526220, 121526309], [121544381, 121544498], [121545508, 121545597], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638836], [121642778, 121642940], [121655421, 121655624]]	[[121638826, 121638836], [121642778, 121642940], [121655421, 121655576]]
ENST00000398212	[[121401916, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121526220, 121526309], [121544381, 121544498], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655626]]	[[121401916, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121526220, 121526309], [121544381, 121544498], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655576]]
ENST00000422369	[[121629170, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655577], [121655763, 121655891]]	[[121629170, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940]]
ENST00000398197	[[121400639, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121544381, 121544498], [121558116, 121558208]]	None
ENST00000519972	[[121402004, 121402036], [121411998, 121412187], [121427168, 121427316]]	None
ENST00000368464	[[121417055, 121417404], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436462]]	None
ENST00000509492	[[121433531, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121451014, 121451070], [121452772, 121452898], [121481155, 121481183]]	[[121451020, 121451070], [121452772, 121452898], [121481155, 121481183]]
ENST00000523345	[[121447600, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121484115, 121484208]]	None
NR_104452	[[121400639, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436893], [121447523, 121447607], [121452772, 121452898], [121460919, 121460982], [121481155, 121481249], [121482093, 121482202], [121491550, 121491673], [121513520, 121513688], [121526220, 121526309], [121544381, 121544498], [121545508, 121545597], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638836], [121642778, 121642940], [121655421, 121655646]]	None
NM_152730	[[121400639, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121526220, 121526309], [121544381, 121544498], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655646]]	[[121401916, 121402036], [121411998, 121412187], [121427168, 121427309], [121433650, 121433805], [121434207, 121434323], [121436317, 121436387], [121447523, 121447607], [121452772, 121452898], [121481155, 121481249], [121482093, 121482202], [121526220, 121526309], [121544381, 121544498], [121560215, 121560334], [121562610, 121562698], [121563346, 121563485], [121576473, 121576556], [121577229, 121577431], [121600266, 121600391], [121602689, 121602832], [121604963, 121605056], [121613198, 121613339], [121615715, 121615806], [121620591, 121620651], [121624762, 121624907], [121625510, 121625572], [121625667, 121625771], [121625900, 121625979], [121629121, 121629247], [121631924, 121631993], [121638640, 121638818], [121642778, 121642940], [121655421, 121655576]]

Promoter

Chrom	Start	End	Description
chr6	121655552	121655592	CAGE_peak_4_at_C6orf170_5end
chr6	121655593	121655661	CAGE_peak_1_at_C6orf170_5end
chr6	121655850	121655885	CAGE_peak_2_at_C6orf170_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I121434	121434400	121440654	2.54	[{'connected_gene': 'GJA1', 'score': 560.6}, {'connected_gene': 'GC06P121435', 'score': 550.77}, {'connected_gene': 'RNU2-8P', 'score': 9.84}, {'connected_gene': 'TBC1D32', 'score': 5.12}, {'connected_gene': 'GC06P121443', 'score': 0.44}]
chr6	GH06I121078	121078574	121078792	0.22	[{'connected_gene': 'TBC1D32', 'score': 9.46}, {'connected_gene': 'LOC105377977', 'score': 0.19}]
chr6	GH06I121333	121333191	121335849	2.04	[{'connected_gene': 'TBC1D32', 'score': 557.3}, {'connected_gene': 'LOC105377977', 'score': 0.06}]
chr6	GH06I121075	121075582	121075966	0.39	[{'connected_gene': 'TBC1D32', 'score': 1.44}, {'connected_gene': 'LOC105377977', 'score': 0.19}]
chr6	GH06I121187	121187915	121188064	0.69	[{'connected_gene': 'TBC1D32', 'score': 0.11}, {'connected_gene': 'LOC105377977', 'score': 0.09}]
chr6	GH06I121309	121309004	121311261	0.31	[{'connected_gene': 'TBC1D32', 'score': 16.23}, {'connected_gene': 'LOC105377977', 'score': 0.06}]
chr6	GH06I121077	121077455	121077805	0.22	[{'connected_gene': 'TBC1D32', 'score': 4.71}, {'connected_gene': 'LOC105377977', 'score': 0.19}]
chr6	GH06I121042	121042665	121044424	0.57	[{'connected_gene': 'LOC105377977', 'score': 0.28}, {'connected_gene': 'TBC1D32', 'score': 0.06}]
chr6	GH06I121381	121381613	121384568	0.62	[{'connected_gene': 'GC06P121382', 'score': 550.77}, {'connected_gene': 'RPS15AP21', 'score': 550.77}, {'connected_gene': 'TBC1D32', 'score': 11.45}, {'connected_gene': 'ENSG00000272714', 'score': 0.44}]