PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000602661	[[108320410, 108320446], [108335935, 108336027], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108398519]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397545]]
ENST00000223528	[[108320410, 108320446], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108403399]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397545]]
ENST00000540160	[[108320412, 108320446], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108397331, 108397581]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108397331, 108397367]]
ENST00000448551	[[108320412, 108320446], [108335935, 108336027], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108402381, 108402597]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108402381, 108402404]]
ENST00000357998	[[108337197, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108402381, 108402597]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108402381, 108402404]]
ENST00000602526	[[108337281, 108337418], [108358878, 108358938], [108363198, 108363322], [108363425, 108363629], [108365979, 108366097], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108402921]]	[[108337313, 108337418], [108358878, 108358938], [108363198, 108363237]]
ENST00000457847	[[108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108398953, 108399199]]	[[108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108398953, 108399075]]
ENST00000490134	[[108320421, 108320446], [108337225, 108337418], [108358878, 108359011]]	None
ENST00000479846	[[108320430, 108320446], [108335935, 108336027], [108336478, 108336613], [108337225, 108337299]]	None
ENST00000374705	[[108337400, 108337418], [108358878, 108358938], [108360366, 108360464], [108363425, 108363629], [108366495, 108366773], [108370099, 108370227]]	[[108360368, 108360464], [108363425, 108363629], [108366495, 108366773], [108370099, 108370227]]
NM_006731	[[108320410, 108320446], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108403399]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397545]]
NM_001198963	[[108320410, 108320446], [108335935, 108336027], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108402381, 108403399]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397429], [108402381, 108402404]]
NM_001079802	[[108320410, 108320446], [108335935, 108336027], [108337225, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108403399]]	[[108337313, 108337418], [108358878, 108358938], [108363425, 108363629], [108366495, 108366773], [108370099, 108370232], [108377558, 108377688], [108380239, 108380373], [108382214, 108382342], [108397331, 108397545]]

Promoter

Chrom	Start	End	Description
chr9	108320392	108320444	CAGE_peak_1_at_FKTN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I105446	105446990	105449879	2.19	[{'connected_gene': 'FSD1L', 'score': 556.96}, {'connected_gene': 'FKTN', 'score': 6.83}, {'connected_gene': 'RALGAPA1P1', 'score': 0.19}]
chr9	GH09I105500	105500001	105501200	0.88	[{'connected_gene': 'FSD1L', 'score': 10.76}, {'connected_gene': 'FKTN', 'score': 6.17}, {'connected_gene': 'RALGAPA1P1', 'score': 0.37}]
chr9	GH09I105632	105632803	105634139	0.31	[{'connected_gene': 'FSD1L', 'score': 5.84}, {'connected_gene': 'ENSG00000279609', 'score': 0.34}, {'connected_gene': 'GC09M105565', 'score': 0.2}, {'connected_gene': 'FKTN', 'score': 0.18}]
chr9	GH09I105609	105609100	105609249	0.6	[{'connected_gene': 'TAL2', 'score': 11.62}, {'connected_gene': 'GC09M105565', 'score': 0.26}, {'connected_gene': 'ENSG00000279609', 'score': 0.25}, {'connected_gene': 'FKTN', 'score': 0.23}]
chr9	GH09I104763	104763261	104765247	1.9	[{'connected_gene': 'NIPSNAP3B', 'score': 560.49}, {'connected_gene': 'NIPSNAP3A', 'score': 20.0}, {'connected_gene': 'RALGAPA1P1', 'score': 12.47}, {'connected_gene': 'FKTN', 'score': 10.46}, {'connected_gene': 'GC09P104774', 'score': 0.39}]
chr9	GH09I105646	105646692	105648349	0.93	[{'connected_gene': 'TMEM38B', 'score': 11.1}, {'connected_gene': 'FKTN', 'score': 6.64}, {'connected_gene': 'FSD1L', 'score': 4.54}, {'connected_gene': 'ENSG00000279609', 'score': 0.44}, {'connected_gene': 'GC09M105565', 'score': 0.18}]
chr9	GH09I105519	105519601	105520400	0.5	[{'connected_gene': 'RALGAPA1P1', 'score': 550.77}, {'connected_gene': 'FKTN', 'score': 6.67}, {'connected_gene': 'FSD1L', 'score': 0.18}]
chr9	GH09I105242	105242386	105247081	2.34	[{'connected_gene': 'SLC44A1', 'score': 556.56}, {'connected_gene': 'FKTN', 'score': 20.76}, {'connected_gene': 'RALGAPA1P1', 'score': 15.21}, {'connected_gene': 'FSD1L', 'score': 0.08}]
chr9	GH09I105457	105457314	105459306	1.06	[{'connected_gene': 'FKTN', 'score': 7.08}, {'connected_gene': 'FSD1L', 'score': 0.37}, {'connected_gene': 'RALGAPA1P1', 'score': 0.21}]
chr9	GH09I105445	105445086	105445929	0.51	[{'connected_gene': 'FKTN', 'score': 6.82}, {'connected_gene': 'FSD1L', 'score': 0.77}, {'connected_gene': 'RALGAPA1P1', 'score': 0.19}]
chr9	GH09I105522	105522362	105522508	0.28	[{'connected_gene': 'FKTN', 'score': 6.22}, {'connected_gene': 'RALGAPA1P1', 'score': 0.77}, {'connected_gene': 'FSD1L', 'score': 0.18}]
chr9	GH09I105323	105323115	105325905	0.31	[{'connected_gene': 'FKTN', 'score': 13.97}, {'connected_gene': 'RALGAPA1P1', 'score': 12.91}, {'connected_gene': 'SLC44A1', 'score': 0.18}, {'connected_gene': 'FSD1L', 'score': 0.13}]
chr9	GH09I105067	105067460	105068602	0.63	[{'connected_gene': 'FKTN', 'score': 18.06}, {'connected_gene': 'RALGAPA1P1', 'score': 11.51}, {'connected_gene': 'SMC2-AS1', 'score': 11.21}, {'connected_gene': 'LOC105376197', 'score': 0.34}, {'connected_gene': 'ENSG00000230013', 'score': 0.18}]
chr9	GH09I105063	105063324	105066999	1.75	[{'connected_gene': 'ABCA1', 'score': 20.5}, {'connected_gene': 'RALGAPA1P1', 'score': 14.9}, {'connected_gene': 'FKTN', 'score': 12.99}, {'connected_gene': 'ENSG00000230013', 'score': 6.11}, {'connected_gene': 'NIPSNAP3A', 'score': 1.39}, {'connected_gene': 'FSD1L', 'score': 1.17}, {'connected_gene': 'LOC105376197', 'score': 0.31}]
chr9	GH09I105557	105557401	105559001	1.96	[{'connected_gene': 'LOC105376199', 'score': 550.77}, {'connected_gene': 'FKTN', 'score': 550.77}, {'connected_gene': 'FSD1L', 'score': 7.8}]
chr9	GH09I105559	105559838	105559897	0.5	[{'connected_gene': 'LOC105376199', 'score': 550.77}, {'connected_gene': 'FKTN', 'score': 550.77}, {'connected_gene': 'GC09M105565', 'score': 0.44}]