PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000244565	[[40994771, 40996334], [40998126, 40998240], [40998393, 40998494], [40999419, 40999487], [40999774, 40999876], [41000622, 41000885], [41001619, 41001920], [41002428, 41002874], [41006900, 41006928]]	[[40996111, 40996334], [40998126, 40998240], [40998393, 40998494], [40999419, 40999487], [40999774, 40999876], [41000622, 41000885], [41001619, 41001920], [41002428, 41002813]]
ENST00000373164	[[40996109, 40996334], [40998126, 40998240], [40998393, 40998494], [40999419, 40999487], [40999774, 40999876], [41000622, 41000885], [41001619, 41001920], [41002428, 41002874]]	[[40996111, 40996334], [40998126, 40998240], [40998393, 40998494], [40999419, 40999487], [40999774, 40999876], [41000622, 41000885], [41001619, 41001920], [41002428, 41002813]]
ENST00000470102	[[40996111, 40996334], [40998126, 40998240], [40998393, 40998494], [40999774, 40999876], [41000622, 41000726]]	None
NM_173561	[[40994639, 40996334], [40998126, 40998240], [40998393, 40998494], [40999419, 40999487], [40999774, 40999876], [41000622, 41000885], [41001619, 41001920], [41002428, 41002874], [41006900, 41006938]]	[[40996111, 40996334], [40998126, 40998240], [40998393, 40998494], [40999419, 40999487], [40999774, 40999876], [41000622, 41000885], [41001619, 41001920], [41002428, 41002813]]

Promoter

Chrom	Start	End	Description
chr6	41006941	41006968	CAGE_peak_1_at_UNC5CL_5end
chr6	41006987	41006998	CAGE_peak_2_at_UNC5CL_5end
chr6	41007060	41007069	CAGE_peak_5_at_UNC5CL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I041171	41171448	41172212	0.68	[{'connected_gene': 'TREML2', 'score': 12.24}, {'connected_gene': 'TSPO2', 'score': 9.84}, {'connected_gene': 'UNC5CL', 'score': 9.84}, {'connected_gene': 'TREM2', 'score': 0.44}, {'connected_gene': 'LOC105375056', 'score': 0.29}]
chr6	GH06I041070	41070635	41076532	2.32	[{'connected_gene': 'NFYA', 'score': 550.77}, {'connected_gene': 'OARD1', 'score': 550.34}, {'connected_gene': 'ADCY10P1', 'score': 37.47}, {'connected_gene': 'TAF8', 'score': 19.81}, {'connected_gene': 'FRS3', 'score': 11.21}, {'connected_gene': 'TSPO2', 'score': 10.65}, {'connected_gene': 'UNC5CL', 'score': 10.65}, {'connected_gene': 'APOBEC2', 'score': 7.7}]
chr6	GH06I040936	40936119	40938206	0.92	[{'connected_gene': 'UNC5CL', 'score': 12.9}, {'connected_gene': 'TSPO2', 'score': 10.71}, {'connected_gene': 'GC06P042401', 'score': 0.34}, {'connected_gene': 'LOC101929555', 'score': 0.17}]
chr6	GH06I040928	40928143	40931276	0.66	[{'connected_gene': 'UNC5CL', 'score': 10.14}, {'connected_gene': 'TSPO2', 'score': 10.13}, {'connected_gene': 'GC06P042401', 'score': 0.37}, {'connected_gene': 'LOC101929555', 'score': 0.16}]
chr6	GH06I041036	41036037	41041755	1.85	[{'connected_gene': 'UNC5CL', 'score': 558.88}, {'connected_gene': 'APOBEC2', 'score': 7.26}, {'connected_gene': 'TSPO2', 'score': 3.46}, {'connected_gene': 'LOC101929555', 'score': 0.37}, {'connected_gene': 'OARD1', 'score': 0.22}]
chr6	GH06I040995	40995297	41000613	1.2	[{'connected_gene': 'TSPO2', 'score': 11.87}, {'connected_gene': 'UNC5CL', 'score': 11.87}, {'connected_gene': 'NFYA', 'score': 4.95}, {'connected_gene': 'LOC101929555', 'score': 0.31}, {'connected_gene': 'GC06P042401', 'score': 0.17}]
chr6	GH06I041079	41079832	41080348	0.31	[{'connected_gene': 'TSPO2', 'score': 10.18}, {'connected_gene': 'UNC5CL', 'score': 10.16}, {'connected_gene': 'TREML1', 'score': 9.63}, {'connected_gene': 'NFYA', 'score': 0.44}, {'connected_gene': 'OARD1', 'score': 0.37}]
chr6	GH06I041080	41080801	41081000	0.4	[{'connected_gene': 'TSPO2', 'score': 10.18}, {'connected_gene': 'UNC5CL', 'score': 10.16}, {'connected_gene': 'TREML1', 'score': 9.63}, {'connected_gene': 'NFYA', 'score': 0.44}, {'connected_gene': 'OARD1', 'score': 0.37}]
chr6	GH06I041066	41066922	41067131	0.95	[{'connected_gene': 'TSPO2', 'score': 11.6}, {'connected_gene': 'UNC5CL', 'score': 11.6}, {'connected_gene': 'APOBEC2', 'score': 7.76}, {'connected_gene': 'NFYA', 'score': 0.44}, {'connected_gene': 'OARD1', 'score': 0.29}]
chr6	GH06I040961	40961276	40963101	1.14	[{'connected_gene': 'TSPO2', 'score': 10.32}, {'connected_gene': 'UNC5CL', 'score': 10.32}, {'connected_gene': 'GC06P042401', 'score': 0.25}, {'connected_gene': 'LOC101929555', 'score': 0.21}]
chr6	GH06I040953	40953933	40960239	1.13	[{'connected_gene': 'ADCY10P1', 'score': 14.03}, {'connected_gene': 'TSPO2', 'score': 10.31}, {'connected_gene': 'UNC5CL', 'score': 10.31}, {'connected_gene': 'GC06P042401', 'score': 0.26}, {'connected_gene': 'LOC101929555', 'score': 0.2}]
chr6	GH06I041062	41062355	41066782	1.32	[{'connected_gene': 'ADCY10P1', 'score': 36.39}, {'connected_gene': 'APOBEC2', 'score': 13.61}, {'connected_gene': 'TSPO2', 'score': 12.25}, {'connected_gene': 'UNC5CL', 'score': 12.22}, {'connected_gene': 'NFYA', 'score': 0.44}, {'connected_gene': 'OARD1', 'score': 0.29}]
chr6	GH06I041026	41026019	41029611	1.19	[{'connected_gene': 'APOBEC2', 'score': 6.77}, {'connected_gene': 'UNC5CL', 'score': 6.68}, {'connected_gene': 'LOC101929555', 'score': 0.77}]
chr6	GH06I040906	40906382	40908022	0.89	[{'connected_gene': 'GC06P042413', 'score': 550.77}, {'connected_gene': 'TSPO2', 'score': 9.99}, {'connected_gene': 'UNC5CL', 'score': 9.99}, {'connected_gene': 'GC06M040834', 'score': 0.2}, {'connected_gene': 'LOC101929555', 'score': 0.13}]