PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000354775	[[165631452, 165632381], [165634254, 165634367], [165636545, 165636687], [165638162, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664634], [165667614, 165668100]]	[[165632286, 165632381], [165634254, 165634367], [165636545, 165636687], [165638162, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664634], [165667614, 165667795]]
ENST00000463610	[[165632011, 165632381], [165634254, 165634443]]	None
ENST00000538148	[[165632047, 165632381], [165634254, 165634367], [165636545, 165636687], [165638162, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664634], [165667486, 165667545]]	[[165632286, 165632381], [165634254, 165634367], [165636545, 165636687], [165638162, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664533]]
ENST00000491436	[[165637910, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649872]]	None
ENST00000461664	[[165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664634], [165667486, 165667777]]	None
ENST00000471457	[[165652061, 165652347], [165664488, 165664634], [165667614, 165667750]]	None
NM_000696	[[165631448, 165632381], [165634254, 165634367], [165636545, 165636687], [165638162, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664634], [165667614, 165667900]]	[[165632286, 165632381], [165634254, 165634367], [165636545, 165636687], [165638162, 165638250], [165638498, 165638687], [165648678, 165648819], [165649723, 165649920], [165651343, 165651478], [165652217, 165652347], [165664488, 165664634], [165667614, 165667795]]

Promoter

Chrom	Start	End	Description
chr1	165667743	165667755	CAGE_peak_3_at_ALDH9A1_5end
chr1	165667789	165667808	CAGE_peak_1_at_ALDH9A1_5end
chr1	165667812	165667841	CAGE_peak_2_at_ALDH9A1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I165629	165629812	165634437	2.3	[{'connected_gene': 'MGST3', 'score': 593.92}, {'connected_gene': 'LOC284685', 'score': 50.62}, {'connected_gene': 'LRRC52', 'score': 11.84}, {'connected_gene': 'ALDH9A1', 'score': 5.89}, {'connected_gene': 'GC01M165662', 'score': 0.29}, {'connected_gene': 'ENSG00000206990', 'score': 0.29}]
chr1	GH01I165634	165634602	165635400	0.69	[{'connected_gene': 'MGST3', 'score': 7.92}, {'connected_gene': 'ALDH9A1', 'score': 6.12}, {'connected_gene': 'GC01M165662', 'score': 0.31}, {'connected_gene': 'ENSG00000206990', 'score': 0.31}]
chr1	GH01I165705	165705537	165705846	0.26	[{'connected_gene': 'MGST3', 'score': 11.88}, {'connected_gene': 'LOC105371581', 'score': 0.77}, {'connected_gene': 'LOC440700', 'score': 0.44}, {'connected_gene': 'ALDH9A1', 'score': 0.44}]
chr1	GH01I165695	165695564	165699265	2.05	[{'connected_gene': 'ALDH9A1', 'score': 582.54}, {'connected_gene': 'LOC440700', 'score': 550.77}, {'connected_gene': 'LOC284685', 'score': 23.64}, {'connected_gene': 'MGST3', 'score': 11.86}, {'connected_gene': 'UCK2', 'score': 9.99}, {'connected_gene': 'GC01M165672', 'score': 0.37}]
chr1	GH01I165685	165685725	165687566	0.6	[{'connected_gene': 'ALDH9A1', 'score': 19.88}, {'connected_gene': 'MGST3', 'score': 11.38}, {'connected_gene': 'GC01M165672', 'score': 0.44}, {'connected_gene': 'LOC440700', 'score': 0.39}]
chr1	GH01I165666	165666401	165666800	0.38	[{'connected_gene': 'ALDH9A1', 'score': 11.31}, {'connected_gene': 'RPS13P1', 'score': 0.77}, {'connected_gene': 'GC01M165662', 'score': 0.77}, {'connected_gene': 'ENSG00000206990', 'score': 0.77}]
chr1	GH01I166489	166488692	166491205	1.48	[{'connected_gene': 'LINC01675', 'score': 550.77}, {'connected_gene': 'LOC284685', 'score': 15.52}, {'connected_gene': 'UCK2', 'score': 9.9}, {'connected_gene': 'ALDH9A1', 'score': 5.36}, {'connected_gene': 'FMO7P', 'score': 0.37}]
chr1	GH01I165767	165767640	165770435	2.09	[{'connected_gene': 'LOC100147773', 'score': 562.79}, {'connected_gene': 'TMCO1', 'score': 550.22}, {'connected_gene': 'LOC284685', 'score': 21.35}, {'connected_gene': 'ALDH9A1', 'score': 18.17}, {'connected_gene': 'GC01P165777', 'score': 0.44}]
chr1	GH01I165670	165670801	165672026	0.2	[{'connected_gene': 'RPS13P1', 'score': 550.77}, {'connected_gene': 'MGST3', 'score': 16.07}, {'connected_gene': 'RPL21P27', 'score': 0.77}, {'connected_gene': 'ALDH9A1', 'score': 0.31}]