PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr11	14358620	14358659	CAGE_peak_4_at_RRAS2_5end
chr11	14358790	14358812	CAGE_peak_5_at_RRAS2_5end
chr11	14379997	14380064	CAGE_peak_2_at_RRAS2_5end
chr11	14380664	14380739	CAGE_peak_1_at_RRAS2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I014540	14540001	14540800	0.85	[{'connected_gene': 'PSMA1', 'score': 12.15}, {'connected_gene': 'PDE3B', 'score': 12.15}, {'connected_gene': 'COPB1', 'score': 11.25}, {'connected_gene': 'RRAS2', 'score': 4.22}, {'connected_gene': 'ENSG00000256206', 'score': 0.34}, {'connected_gene': 'PIR39085', 'score': 0.22}]
chr11	GH11I014518	14518458	14521413	2.08	[{'connected_gene': 'PSMA1', 'score': 560.54}, {'connected_gene': 'ENSG00000256206', 'score': 550.77}, {'connected_gene': 'COPB1', 'score': 36.56}, {'connected_gene': 'CYP2R1', 'score': 9.91}, {'connected_gene': 'SPON1', 'score': 8.83}, {'connected_gene': 'RRAS2', 'score': 6.03}]
chr11	GH11I014253	14253490	14255386	0.52	[{'connected_gene': 'RRAS2', 'score': 5.83}, {'connected_gene': 'SPON1-AS1', 'score': 0.37}, {'connected_gene': 'RNA5SP332', 'score': 0.13}, {'connected_gene': 'SPON1', 'score': 0.06}]
chr11	GH11I014269	14269966	14272300	0.72	[{'connected_gene': 'RRAS2', 'score': 10.23}, {'connected_gene': 'SPON1-AS1', 'score': 0.77}, {'connected_gene': 'RNA5SP332', 'score': 0.12}]
chr11	GH11I014344	14344179	14344992	0.2	[{'connected_gene': 'RRAS2', 'score': 0.37}, {'connected_gene': 'SPON1-AS1', 'score': 0.19}]
chr11	GH11I014347	14347691	14348220	0.38	[{'connected_gene': 'RRAS2', 'score': 0.37}, {'connected_gene': 'SPON1-AS1', 'score': 0.19}]
chr11	GH11I014330	14330942	14332267	0.63	[{'connected_gene': 'RRAS2', 'score': 0.29}, {'connected_gene': 'SPON1-AS1', 'score': 0.22}]
chr11	GH11I014356	14356201	14356800	0.74	[{'connected_gene': 'RRAS2', 'score': 0.44}, {'connected_gene': 'SPON1-AS1', 'score': 0.18}]
chr11	GH11I014359	14359835	14360064	0.76	[{'connected_gene': 'RRAS2', 'score': 0.77}, {'connected_gene': 'SPON1-AS1', 'score': 0.17}]
chr11	GH11I014334	14334714	14343779	1.82	[{'connected_gene': 'RRAS2', 'score': 554.97}, {'connected_gene': 'SPON1-AS1', 'score': 0.2}]
chr11	GH11I014357	14357200	14359818	2.17	[{'connected_gene': 'RRAS2', 'score': 560.45}, {'connected_gene': 'SPON1-AS1', 'score': 0.18}]
chr11	GH11I014329	14329425	14330220	0.2	[{'connected_gene': 'RRAS2', 'score': 0.29}, {'connected_gene': 'SPON1-AS1', 'score': 0.22}]
chr11	GH11I014345	14345520	14346712	0.46	[{'connected_gene': 'RRAS2', 'score': 0.37}, {'connected_gene': 'SPON1-AS1', 'score': 0.19}]
chr11	GH11I014380	14380759	14382056	1.25	[{'connected_gene': 'RRAS2', 'score': 0.37}, {'connected_gene': 'LOC105376670', 'score': 0.23}]
chr11	GH11I014382	14382075	14382092	0.58	[{'connected_gene': 'RRAS2', 'score': 0.37}, {'connected_gene': 'LOC105376670', 'score': 0.23}]
chr11	GH11I014384	14384455	14384604	0.2	[{'connected_gene': 'RRAS2', 'score': 9.05}, {'connected_gene': 'LOC105376670', 'score': 0.23}]
chr11	GH11I014386	14386516	14387414	0.52	[{'connected_gene': 'RRAS2', 'score': 0.34}, {'connected_gene': 'LOC105376670', 'score': 0.25}]
chr11	GH11I014376	14376482	14377847	0.31	[{'connected_gene': 'RRAS2', 'score': 0.39}, {'connected_gene': 'LOC105376670', 'score': 0.22}]
chr11	GH11I014368	14368731	14370696	0.31	[{'connected_gene': 'RRAS2', 'score': 10.57}, {'connected_gene': 'LOC105376670', 'score': 0.2}]
chr11	GH11I014410	14410891	14415985	0.91	[{'connected_gene': 'RRAS2', 'score': 6.22}, {'connected_gene': 'LOC105376670', 'score': 0.34}]
chr11	GH11I014287	14287481	14289986	0.58	[{'connected_gene': 'RRAS2', 'score': 10.25}, {'connected_gene': 'SPON1', 'score': 8.22}, {'connected_gene': 'SPON1-AS1', 'score': 0.37}]
chr11	GH11I013991	13991752	13994203	0.78	[{'connected_gene': 'RRAS2', 'score': 4.4}, {'connected_gene': 'GC11M013996', 'score': 0.39}, {'connected_gene': 'SPON1', 'score': 0.29}]
chr11	GH11I013939	13939725	13941096	0.53	[{'connected_gene': 'RRAS2', 'score': 2.46}, {'connected_gene': 'LOC101928132', 'score': 0.37}, {'connected_gene': 'SPON1', 'score': 0.34}]
chr11	GH11I014445	14445011	14447854	0.72	[{'connected_gene': 'COPB1', 'score': 9.06}, {'connected_gene': 'RRAS2', 'score': 6.09}, {'connected_gene': 'LOC105376670', 'score': 0.39}, {'connected_gene': 'GC11P014466', 'score': 0.34}]
chr11	GH11I014416	14416810	14418017	0.38	[{'connected_gene': 'COPB1', 'score': 9.47}, {'connected_gene': 'RRAS2', 'score': 6.23}, {'connected_gene': 'LOC105376670', 'score': 0.37}]
chr11	GH11I014307	14307958	14316715	1.23	[{'connected_gene': 'SPON1-AS1', 'score': 10.23}, {'connected_gene': 'RRAS2', 'score': 4.55}]
chr11	GH11I014322	14322023	14328173	1.12	[{'connected_gene': 'SPON1-AS1', 'score': 11.03}, {'connected_gene': 'RRAS2', 'score': 9.65}]
chr11	GH11I014303	14303932	14305769	0.31	[{'connected_gene': 'SPON1-AS1', 'score': 12.04}, {'connected_gene': 'RRAS2', 'score': 0.22}]
chr11	GH11I014319	14319559	14320665	0.87	[{'connected_gene': 'SPON1-AS1', 'score': 11.03}, {'connected_gene': 'RRAS2', 'score': 0.26}]
chr11	GH11I014274	14274655	14275776	0.2	[{'connected_gene': 'SPON1-AS1', 'score': 550.77}, {'connected_gene': 'RRAS2', 'score': 0.17}]
chr11	GH11I014349	14349795	14351070	0.69	[{'connected_gene': 'SPON1-AS1', 'score': 10.74}, {'connected_gene': 'RRAS2', 'score': 4.85}]
chr11	GH11I014300	14300600	14301024	1.15	[{'connected_gene': 'SPON1-AS1', 'score': 0.31}, {'connected_gene': 'RRAS2', 'score': 0.21}]
chr11	GH11I014419	14418955	14419064	0.62	[{'connected_gene': 'SPON1-AS1', 'score': 10.78}, {'connected_gene': 'LOC105376670', 'score': 0.37}, {'connected_gene': 'RRAS2', 'score': 0.23}]
chr11	GH11I014421	14421270	14425059	1.4	[{'connected_gene': 'SPON1-AS1', 'score': 10.78}, {'connected_gene': 'SPON1', 'score': 9.78}, {'connected_gene': 'COPB1', 'score': 9.46}, {'connected_gene': 'RRAS2', 'score': 6.87}, {'connected_gene': 'LOC105376670', 'score': 0.39}]
chr11	GH11I014418	14418095	14418264	0.2	[{'connected_gene': 'LOC105376670', 'score': 0.37}, {'connected_gene': 'RRAS2', 'score': 0.23}]
chr11	GH11I014407	14407232	14408194	0.2	[{'connected_gene': 'LOC105376670', 'score': 0.31}, {'connected_gene': 'RRAS2', 'score': 0.26}]
chr11	GH11I014373	14373720	14375785	0.89	[{'connected_gene': 'SPON1', 'score': 10.81}, {'connected_gene': 'RRAS2', 'score': 0.39}, {'connected_gene': 'LOC105376670', 'score': 0.21}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000545643	[[14299471, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317419], [14380308, 14380730]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317419], [14380308, 14380416]]
ENST00000537760	[[14299471, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14385936, 14386052]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14385936, 14385939]]
ENST00000414023	[[14299509, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317405]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
ENST00000529237	[[14300227, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14385936, 14386052]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
ENST00000256196	[[14300295, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14380308, 14380730]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14380308, 14380416]]
ENST00000534746	[[14300484, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14375958, 14376046]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
ENST00000526063	[[14300648, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14379802, 14380031]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
ENST00000532814	[[14300655, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14379783, 14380031]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
ENST00000531807	[[14300942, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14363355, 14363640]]	[[14300942, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14363355, 14363406]]
ENST00000532950	[[14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14378231, 14378315], [14380308, 14380693]]	[[14378279, 14378315], [14380308, 14380416]]
ENST00000531421	[[14303235, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14358546, 14358712]]	[[14303235, 14303266], [14316016, 14316125], [14316305, 14316373]]
ENST00000526717	[[14316005, 14316125], [14316305, 14316408], [14317313, 14317401], [14329752, 14329863], [14380308, 14380701]]	[[14329812, 14329863], [14380308, 14380416]]
NM_001177315	[[14299465, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14379783, 14380031]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
NM_001102669	[[14299465, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14379802, 14380073]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316373]]
NM_012250	[[14299465, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14380308, 14380730]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14380308, 14380416]]
NM_001177314	[[14299465, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14385936, 14386052]]	[[14300882, 14300970], [14303147, 14303266], [14316016, 14316125], [14316305, 14316408], [14317313, 14317401], [14385936, 14385939]]