PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000257766	[[84833959, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84927516, 84927578], [84930774, 84930889], [84937297, 84937314]]	[[84834788, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925584]]
ENST00000403245	[[84833959, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84930774, 84930889], [84936054, 84936170], [84937297, 84937353]]	[[84834788, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84930774, 84930889], [84936054, 84936111]]
ENST00000497936	[[84884490, 84884673], [84884928, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84930774, 84930889], [84936054, 84936170], [84937297, 84937326]]	None
ENST00000435955	[[84925125, 84925183], [84925493, 84925640], [84928820, 84928932], [84930774, 84930889], [84936054, 84936170], [84937297, 84937335]]	[[84928885, 84928932], [84930774, 84930889], [84936054, 84936111]]
ENST00000461137	[[84833959, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884928, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904748]]	None
ENST00000487999	[[84834673, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865313]]	None
NM_014895	[[84833959, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84930774, 84930889], [84936054, 84936170], [84937297, 84937353]]	[[84834788, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84930774, 84930889], [84936054, 84936111]]
NM_001286206	[[84833959, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925640], [84927516, 84927578], [84930774, 84930889], [84937297, 84937353]]	[[84834788, 84834995], [84836096, 84836231], [84856405, 84856504], [84859280, 84859422], [84862263, 84862898], [84865016, 84865229], [84870530, 84870635], [84871464, 84871628], [84872862, 84872989], [84879046, 84879152], [84881324, 84881437], [84883766, 84883907], [84884445, 84884673], [84884932, 84885066], [84894904, 84895166], [84896049, 84896341], [84903326, 84903408], [84904601, 84904793], [84910506, 84910623], [84911454, 84911485], [84913698, 84913814], [84922674, 84922742], [84924999, 84925183], [84925493, 84925584]]

Promoter

Chrom	Start	End	Description
chr6	84937320	84937372	CAGE_peak_1_at_KIAA1009_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I083708	83708600	83709211	1.82	[{'connected_gene': 'SNAP91', 'score': 562.66}, {'connected_gene': 'CEP162', 'score': 22.58}, {'connected_gene': 'PRSS35', 'score': 0.08}]
chr6	GH06I084760	84760055	84767790	2.43	[{'connected_gene': 'TBX18', 'score': 550.77}, {'connected_gene': 'CEP162', 'score': 21.05}, {'connected_gene': 'SNX14', 'score': 9.97}, {'connected_gene': 'TBX18-AS1', 'score': 8.51}, {'connected_gene': 'GC06P084760', 'score': 0.77}, {'connected_gene': 'GC06P084744', 'score': 0.37}]
chr6	GH06I083429	83429601	83433526	2.26	[{'connected_gene': 'ME1', 'score': 558.89}, {'connected_gene': 'PRSS35', 'score': 18.07}, {'connected_gene': 'CEP162', 'score': 13.69}, {'connected_gene': 'ENSG00000219951', 'score': 0.28}]
chr6	GH06I083859	83859000	83861258	2.12	[{'connected_gene': 'CYB5R4', 'score': 550.77}, {'connected_gene': 'CEP162', 'score': 30.97}, {'connected_gene': 'RIPPLY2', 'score': 11.34}, {'connected_gene': 'PIR41363', 'score': 0.44}]
chr6	GH06I084361	84361463	84361689	0.92	[{'connected_gene': 'SMARCE1P2', 'score': 0.2}, {'connected_gene': 'CEP162', 'score': 0.12}]
chr6	GH06I084378	84378263	84378543	0.22	[{'connected_gene': 'SMARCE1P2', 'score': 0.23}, {'connected_gene': 'CEP162', 'score': 0.1}]
chr6	GH06I084791	84791069	84791988	0.77	[{'connected_gene': 'CEP162', 'score': 12.28}, {'connected_gene': 'TBX18', 'score': 11.87}, {'connected_gene': 'GC06P084744', 'score': 0.25}, {'connected_gene': 'GC06P084876', 'score': 0.17}]
chr6	GH06I083884	83884582	83884711	0.8	[{'connected_gene': 'CEP162', 'score': 11.81}, {'connected_gene': 'CYB5R4', 'score': 11.69}, {'connected_gene': 'RIPPLY2', 'score': 10.96}, {'connected_gene': 'GC06P083900', 'score': 0.37}, {'connected_gene': 'PIR41363', 'score': 0.37}]
chr6	GH06I084280	84280015	84281326	0.74	[{'connected_gene': 'CEP162', 'score': 0.23}, {'connected_gene': 'SMARCE1P2', 'score': 0.1}]
chr6	GH06I084258	84258201	84259829	0.4	[{'connected_gene': 'CEP162', 'score': 0.29}, {'connected_gene': 'SMARCE1P2', 'score': 0.09}]
chr6	GH06I084282	84282385	84283481	0.2	[{'connected_gene': 'CEP162', 'score': 0.22}, {'connected_gene': 'SMARCE1P2', 'score': 0.11}]
chr6	GH06I084269	84269763	84270862	1.02	[{'connected_gene': 'CEP162', 'score': 0.26}, {'connected_gene': 'SMARCE1P2', 'score': 0.1}]
chr6	GH06I084317	84317674	84318034	0.33	[{'connected_gene': 'CEP162', 'score': 0.17}, {'connected_gene': 'SMARCE1P2', 'score': 0.14}]
chr6	GH06I083866	83866793	83869051	1.52	[{'connected_gene': 'CEP162', 'score': 99.77}, {'connected_gene': 'DOPEY1', 'score': 90.74}, {'connected_gene': 'UBE3D', 'score': 43.02}, {'connected_gene': 'RWDD2A', 'score': 11.76}, {'connected_gene': 'RIPPLY2', 'score': 6.33}, {'connected_gene': 'CYB5R4', 'score': 6.23}, {'connected_gene': 'PIR41363', 'score': 0.77}, {'connected_gene': 'GC06P083900', 'score': 0.29}]
chr6	GH06I084017	84017740	84020322	0.54	[{'connected_gene': 'CEP162', 'score': 10.06}, {'connected_gene': 'RIPPLY2', 'score': 5.26}, {'connected_gene': 'MRAP2', 'score': 5.1}, {'connected_gene': 'ENSG00000230852', 'score': 0.77}, {'connected_gene': 'ENSG00000228679', 'score': 0.28}]
chr6	GH06I084226	84226601	84228600	2.05	[{'connected_gene': 'CEP162', 'score': 583.49}, {'connected_gene': 'RIPPLY2', 'score': 12.22}, {'connected_gene': 'GC06P084130', 'score': 0.15}]
chr6	GH06I084026	84026552	84028697	1.08	[{'connected_gene': 'CEP162', 'score': 22.32}, {'connected_gene': 'MRAP2', 'score': 6.44}, {'connected_gene': 'RIPPLY2', 'score': 4.62}, {'connected_gene': 'PIR38382', 'score': 0.34}]
chr6	GH06I084059	84059048	84060826	0.66	[{'connected_gene': 'CEP162', 'score': 22.45}, {'connected_gene': 'MRAP2', 'score': 17.63}, {'connected_gene': 'PIR38382', 'score': 0.44}, {'connected_gene': 'GC06P084130', 'score': 0.19}]
chr6	GH06I084192	84192785	84194075	0.6	[{'connected_gene': 'CEP162', 'score': 10.91}, {'connected_gene': 'MRAP2', 'score': 5.43}, {'connected_gene': 'GC06P084130', 'score': 0.21}]
chr6	GH06I084020	84020348	84021091	0.2	[{'connected_gene': 'CEP162', 'score': 10.06}, {'connected_gene': 'ENSG00000230852', 'score': 0.77}, {'connected_gene': 'ENSG00000228679', 'score': 0.28}]
chr6	GH06I084221	84221530	84221630	0.35	[{'connected_gene': 'CEP162', 'score': 0.44}, {'connected_gene': 'GC06P084130', 'score': 0.16}]
chr6	GH06I083463	83463449	83465721	1.09	[{'connected_gene': 'PRSS35', 'score': 26.52}, {'connected_gene': 'CEP162', 'score': 12.28}, {'connected_gene': 'ME1', 'score': 4.97}, {'connected_gene': 'CYB5R4', 'score': 4.9}]
chr6	GH06I083853	83853001	83854349	1.6	[{'connected_gene': 'RIPPLY2', 'score': 577.94}, {'connected_gene': 'GC06M083852', 'score': 550.77}, {'connected_gene': 'CEP162', 'score': 51.57}, {'connected_gene': 'DOPEY1', 'score': 9.69}]
chr6	GH06I084207	84207916	84208040	0.44	[{'connected_gene': 'RIPPLY2', 'score': 10.17}, {'connected_gene': 'CEP162', 'score': 0.37}, {'connected_gene': 'GC06P084130', 'score': 0.18}]
chr6	GH06I084051	84051207	84053673	1.62	[{'connected_gene': 'MRAP2', 'score': 23.2}, {'connected_gene': 'CEP162', 'score': 20.83}, {'connected_gene': 'RIPPLY2', 'score': 4.26}, {'connected_gene': 'PIR38382', 'score': 0.77}, {'connected_gene': 'GC06P084130', 'score': 0.18}]
chr6	GH06I084033	84033398	84034601	2.02	[{'connected_gene': 'MRAP2', 'score': 557.05}, {'connected_gene': 'CEP162', 'score': 13.75}, {'connected_gene': 'PIR38382', 'score': 0.37}]
chr6	GH06I084588	84588401	84588800	0.52	[{'connected_gene': 'TBX18-AS1', 'score': 7.06}, {'connected_gene': 'CEP162', 'score': 4.03}, {'connected_gene': 'PIR42173', 'score': 0.31}, {'connected_gene': 'GC06M084682', 'score': 0.16}, {'connected_gene': 'PIR35172', 'score': 0.16}]
chr6	GH06I084617	84617254	84619519	1.16	[{'connected_gene': 'TBX18-AS1', 'score': 17.54}, {'connected_gene': 'CEP162', 'score': 12.15}, {'connected_gene': 'ENSG00000219604', 'score': 10.67}, {'connected_gene': 'PIR42173', 'score': 0.22}, {'connected_gene': 'GC06M084682', 'score': 0.21}, {'connected_gene': 'PIR35172', 'score': 0.21}]
chr6	GH06I084136	84136836	84137339	0.8	[{'connected_gene': 'GC06P084130', 'score': 0.44}, {'connected_gene': 'CEP162', 'score': 0.16}, {'connected_gene': 'MRAP2', 'score': 0.14}]
chr6	GH06I084150	84150802	84150951	0.49	[{'connected_gene': 'GC06P084130', 'score': 0.34}, {'connected_gene': 'CEP162', 'score': 0.18}]