PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
BARD1	4	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Dong Y (2003), Dong Y (2003), Feki A (2005), Jiang J (2011), Tembe V (2015), Tembe V (2015), Tembe V (2015)	7
EIF2B2	0	ABCF1	5	biochemical	Kristensen AR (2012)	1
NTRK1	1	YBX1	1	affinity chromatography technology	Emdal KB (2015)	1
FKBP3	0	NELFB	7	biochemical	Kristensen AR (2012)	1
NELFB	7	NMT1	4	biochemical	Kristensen AR (2012)	1
FKBP3	0	DDX1	6	biochemical	Kristensen AR (2012)	1
SRPK1	2	EWSR1	2	affinity chromatography technology	So J (2015)	1
DDX1	6	KRT18	2	biochemical	Kristensen AR (2012)	1
NEDD4	2	FKBP3	0	pull down	Persaud A (2009)	1
EDC4	4	NELFB	7	biochemical	Kristensen AR (2012)	1
DIMT1	0	ILF2	3	biochemical	Kristensen AR (2012)	1
TP53	0	IGF2BP3	0	affinity chromatography technology	Fogeron ML (2013)	1
FKBP3	0	NMT1	4	biochemical	Kristensen AR (2012)	1
KRT18	2	HNRNPU	12	biochemical	Kristensen AR (2012)	1
FKBP3	0	PACSIN3	2	biochemical	Havugimana PC (2012)	1
RTRAF	0	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
RTRAF	0	DDX1	6	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
NTRK1	1	MYH10	9	affinity chromatography technology	Emdal KB (2015)	1
FKBP3	0	EIF2B3	0	biochemical	Kristensen AR (2012)	1
NTRK1	1	RFC4	1	affinity chromatography technology	Emdal KB (2015)	1
ABCF1	5	ILF2	3	biochemical	Kristensen AR (2012)	1
HDAC2	1	FKBP3	0	affinity chromatography technology, affinity chromatography technology	Yang WM (2001), Yang WM (2001)	2
NMT1	4	ILF2	3	biochemical	Kristensen AR (2012)	1
FKBP3	0	MAP1S	3	biochemical	Kristensen AR (2012)	1
NTRK1	1	EDC4	4	affinity chromatography technology	Emdal KB (2015)	1
NMT1	4	HNRNPU	12	biochemical	Kristensen AR (2012)	1
HNRNPA2B1	2	YBX1	1	biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012)	2
RTRAF	0	HNRNPU	12	biochemical, affinity chromatography technology	Kristensen AR (2012), Hein MY (2015)	2
SMURF1	4	FKBP3	0	enzymatic study	Andrews PS (2010)	1
EWSR1	2	ILF2	3	bioid	Elzi DJ (2014)	1
HNRNPU	12	YBX1	1	biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012)	2
EIF2B3	0	ABCF1	5	biochemical	Kristensen AR (2012)	1
FKBP3	0	MDM2	2	pull down, affinity chromatography technology	Ochocka AM (2009), Ochocka AM (2009)	2
ABCF1	5	NMT1	4	biochemical	Kristensen AR (2012)	1
EIF2B2	0	HNRNPU	12	biochemical	Kristensen AR (2012)	1
NTRK1	1	MAP1S	3	affinity chromatography technology	Emdal KB (2015)	1
MDM2	2	EDC4	4	affinity chromatography technology	Okoro DR (2013)	1
DYNLL1	0	KRT18	2	affinity chromatography technology	Hein MY (2015)	1
BARD1	4	MTA2	1	affinity chromatography technology	Woods NT (2012)	1
DDX1	6	NMT1	4	biochemical	Kristensen AR (2012)	1
BARD1	4	FKBP3	0	two hybrid, affinity chromatography technology	Woods NT (2012), Woods NT (2012)	2
DIMT1	0	HNRNPU	12	biochemical, affinity chromatography technology	Kristensen AR (2012), Hein MY (2015)	2
NTRK1	1	FKBP3	0	affinity chromatography technology	Emdal KB (2015)	1
TP53	0	RFC4	1	affinity chromatography technology	Fogeron ML (2013)	1
EDC4	4	DIMT1	0	biochemical	Kristensen AR (2012)	1
YBX1	1	ILF2	3	biochemical	Kristensen AR (2012)	1
DDX1	6	HDAC1	4	affinity chromatography technology	Boldt K (2016)	1
EIF2B2	0	EIF2B3	0	biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015), Huttlin EL (2017), Boldt K (2016)	5
DIMT1	0	NMT1	4	biochemical	Kristensen AR (2012)	1
DIMT1	0	ABCF1	5	biochemical	Kristensen AR (2012)	1
ABCF1	5	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
NTRK1	1	SRPK1	2	affinity chromatography technology	Emdal KB (2015)	1
NELFB	7	YBX1	1	biochemical	Kristensen AR (2012)	1
NTRK1	1	SYNCRIP	6	affinity chromatography technology	Emdal KB (2015)	1
FBXO25	1	FKBP3	0	enzymatic study	Teixeira FR (2013)	1
FKBP3	0	CGGBP1	1	biochemical	Wan C (2015)	1
LRRFIP1	6	RTRAF	0	biochemical	Kristensen AR (2012)	1
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
YBX1	1	EWSR1	2	affinity chromatography technology	Dutertre M (2010)	1
FKBP3	0	LRRFIP1	6	biochemical	Havugimana PC (2012)	1
TP53	0	YY1	7	pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, pull down, pull down	Groenroos E (2004), Groenroos E (2004), Sui G (2004), Sui G (2004), Sui G (2004), Wu S (2007), Wan M (2012), Kotlyar M (2015)	8
FKBP3	0	YBX1	1	biochemical	Kristensen AR (2012)	1
EIF2B2	0	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
EDC4	4	NMT1	4	biochemical	Kristensen AR (2012)	1
NTRK1	1	EWSR1	2	affinity chromatography technology	Emdal KB (2015)	1
EWSR1	2	FKBP3	0	bioid	Elzi DJ (2014)	1
NELFB	7	RFC4	1	biochemical	Kristensen AR (2012)	1
NELFB	7	ILF2	3	biochemical	Kristensen AR (2012)	1
EIF2B3	0	HNRNPU	12	biochemical	Kristensen AR (2012)	1
RTRAF	0	ABCF1	5	biochemical	Kristensen AR (2012)	1
NEDD4L	3	YY1	7	enzymatic study, affinity chromatography technology	Persaud A (2009), Persaud A (2009)	2
EIF2B3	0	EDC4	4	biochemical	Kristensen AR (2012)	1
DDX1	6	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
EDC4	4	ILF2	3	biochemical	Kristensen AR (2012)	1
EDC4	4	RFC4	1	biochemical	Kristensen AR (2012)	1
SMURF1	4	HNRNPU	12	affinity chromatography technology	Xie Y (2013)	1
MDM2	2	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, protein complementation assay, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, two hybrid, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, pull down, unspecified method, affinity chromatography technology, two hybrid, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, protein complementation assay, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, x-ray crystallography, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, x-ray crystallography, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, far western blotting, affinity chromatography technology, x-ray crystallography, unspecified method, pull down, pull down, pull down, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference, fluorescent resonance energy transfe, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, biochemical, unspecified method, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, protein complementation assay, imaging technique, affinity chromatography technology, enzymatic study, affinity chromatography technology, fluorescent resonance energy transfe, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, enzymatic study, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, imaging technique, enzymatic study, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, enzymatic study, pull down, pull down, unspecified method, fluorescent resonance energy transfe, two hybrid, pull down	Li M (2003), Latonen L (2001), Zhang Y (2003), Zhang Y (2003), Kurki S (2003), Kurki S (2003), Freeman DJ (2003), Ito A (2002), Ito A (2002), Grossman SR (1998), Fang S (2000), Liu G (2000), Zhang Y (1998), Zhang Y (1998), Chen J (1993), Thut CJ (1997), Leung KM (2002), Wawrzynow B (2009), Ochocka AM (2009), Chen D (2009), Hedstroem E (2009), Brenkman AB (2008), Qiu W (2008), Qiu W (2008), Zhang Z (2008), Muller P (2008), Colaluca IN (2008), Colaluca IN (2008), Colaluca IN (2008), Tang Y (2008), Tang Y (2008), Lu X (2007), Lukashchuk N (2007), Lukashchuk N (2007), Lee JH (2007), Carter S (2007), Sasaki M (2007), Brooks CL (2007), Li L (2007), Becker K (2007), Zhao BX (2006), Zhao BX (2006), Abida WM (2007), Yang WH (2006), Ma J (2006), Wallace M (2006), Shimizu H (2006), Andrews P (2006), Yang J (2009), Zhu Z (2009), Wang C (2005), Higashitsuji H (2005), Higashitsuji H (2005), Yan C (2005), Vega FM (2004), Dai MS (2004), Dai MS (2004), Groenroos E (2004), Ohkubo S (2006), Sui G (2004), Di Stefano V (2004), Brignone C (2004), Katayama H (2004), Linares LK (2003), OKeefe K (2003), Wang W (2003), Blattner C (2002), Matt T (2004), Matt T (2004), Eyckerman S (2005), Shimizu H (2002), Shimizu H (2002), Migliorini D (2002), Gu J (2001), Sengupta S (2001), Chernov MV (2001), Cross B (2011), Cross B (2011), Cross B (2011), Buschmann T (2001), Nakamura S (2000), Rodriguez MS (2000), Rodriguez MS (2000), Geyer RK (2000), Zaika A (1999), Maki CG (1999), Chen L (2010), Chen L (2010), Lin RK (2010), Fuchs SY (1998), Xirodimas DP (2001), Fuchs SY (1998), Inoue T (2001), Wu L (2011), Du W (2009), Li DQ (2009), Illuzzi JL (2011), Oliver TG (2011), Kim MM (2007), Marchenko ND (2007), Vaseva AV (2009), Vaseva AV (2009), Lai KP (2010), Naderi EH (2011), Zdzalik M (2010), Singh RK (2007), Meng L (2011), Moore L (2007), Kim S (2010), Inoue Y (2011), Fraser JA (2010), Worrall EG (2009), Wu H (2011), Wang KS (2011), Wang KS (2011), Wang KS (2011), Izumi T (2010), Huang YF (2009), Tang J (2006), Tang J (2006), Fu X (2010), Fu X (2010), Shloush J (2011), Yadavilli S (2009), Stevenson LF (2007), Suzuki T (2010), Cheng Q (2009), Kulikov R (2010), Kulikov R (2010), Li L (2010), Li L (2010), Cheng Q (2011), Li D (2011), Nie J (2010), Demma M (2010), Sun XX (2011), Jung CR (2010), Jung CR (2010), Jung CR (2010), Jung CR (2010), Nishida T (2011), Li M (2011), Li M (2011), Amson R (2011), Amson R (2011), Bhatt P (2011), David Y (2011), Zhang Y (2010), Liu J (2010), Liu J (2010), Song MS (2008), Cummins JM (2004), Kim CK (2010), Kim CK (2010), Yan C (2010), Wang X (2011), Phillips A (2010), Phillips A (2010), Kang HN (2011), Kang HN (2011), Wang X (2004), Sionov RV (2001), Wei S (2012), Camus S (2012), Ding B (2012), Yang Z (2012), Yang Z (2012), Tripathi V (2007), Tripathi V (2007), Dai C (2011), Chen S (2012), Honda R (1997), Kinyamu HK (2003), Zhan C (2012), Zhan C (2012), Lee CW (2010), Zhou X (2012), Bouska A (2008), Wade M (2012), Ferreon JC (2009), Domenici F (2011), Uldrijan S (2007), Uldrijan S (2007), Stad R (2000), Stad R (2000), Banks D (2006), Banks D (2006), Bernal F (2010), Bernal F (2010), Jain AK (2012), Kane SA (2000), Tan Z (2000), Yang Z (2012), Wawrzynow B (2007), Wawrzynow B (2007), Wawrzynow B (2007), Hiramatsu K (2006), Bao-Lei T (2006), Kulikov R (2005), Yang Y (2005), Lindstroem MS (2007), Bech-Otschir D (2001), Li Y (2012), Gillotin S (2010), Burch L (2004), Liu WL (2001), OHagan HM (2004), OHagan HM (2004), Funari G (2009), Candeias MM (2008), Brew CT (2006), Wang J (2011), Calabro V (2002), Burch L (2004), Iyappan S (2010), Poyurovsky MV (2010), Poyurovsky MV (2010), Poyurovsky MV (2010), Kurki S (2004), Tian LF (2006), Wang J (2006), Bae S (2012), Bae S (2012), Frazier DP (2012), Frazier DP (2012), Lew QJ (2012), Lew QJ (2012), Huart AS (2012), Li Z (2004), Balint E (1999), Balint E (1999), Funston G (2012), Dou X (2012), Sadagopan S (2012), Sadagopan S (2012), Dixit D (2012), Roxburgh P (2012), Xu L (2012), Drago-Ferrante R (2008), Li H (2009), Negorev D (2001), Wang X (2012), Wang X (2012), Wang X (2012), Boettger A (1997), Jung H (2008), Oliner JD (1992), Seemann S (2005), Kawai H (2007), Schuster K (2007), Dawson R (2003), DArcy P (2009), Schon O (2004), Schon O (2004), Hogan C (2008), Lottin-Divoux S (2005), Latini P (2011), Latini P (2011), Latini P (2011), McCoy MA (2003), Kussie PH (1996), Shieh SY (1997), Shieh SY (1997), Naski N (2009), Naski N (2009), Schon O (2002), Tamborini E (2001), Wade M (2006), Wade M (2006), Lohrum MA (2003), Garcia JF (2002), Garcia JF (2002), Kallen J (2009), Kulikov R (2006), Kulikov R (2006), Czarna A (2009), Czarna A (2009), Hu B (2007), Chi SW (2005), Yu GW (2006), Yu GW (2006), Saji S (2001), Chen L (1997), Zhang H (1998), Issaeva N (2004), Wade M (2008), Wade M (2008), Chen HF (2007), Chen HF (2007), Li HH (2004), Wang J (2011), Gu L (2009), Gu L (2009), Meng L (2008), Meng L (2008), Okamoto K (2006), Malaguarnera R (2008), Zhou M (2003), Zhou M (2003), Di Conza G (2012), Xirodimas DP (2004), Auger KR (2005), Li J (2011), Li J (2011), Li J (2011), Lee SJ (2007), Chau JF (2012), Lu X (2005), Mazars A (2010), Mazars A (2010), Mazars A (2010), Olson DC (1993), Picksley SM (1994), Issaeva N (2004), Issaeva N (2004), Zhang J (2012), Wen W (2013), Wen W (2013), Bursac S (2012), Yang Y (2013), Yang Y (2013), Landre V (2013), Pettersson S (2012), Thin TH (2007), Thin TH (2007), Piccinin S (2012), Shan B (2012), Caratozzolo MF (2012), Lui K (2013), Kobet E (2000), Lim KH (2010), Ranaweera RS (2013), Cui D (2013), Ebina M (2013), He Y (2013), He Y (2013), Siepe D (2009), Suh HW (2013), Zhan YA (2013), Wang J (2011), Hjerpe R (2010), Murray MF (2007), Jin L (2013), Jin L (2013), Zhang R (2013), Yan S (2013), Sun XX (2011), Heyne K (2014), Heyne K (2014), Bista M (2013), Jin J (2014), Mikawa T (2014), Qi M (2014), Cheng Q (2014), Zhang HH (2014), Perry ME (2000), Nishizaki M (2004), Sanchez-Aguilera A (2006), Chen YC (2013), Bertamino A (2013), Ding G (2013), Kubo N (2013), Kubo N (2013), Hsueh KW (2013), Kofod-Olsen E (2014), Fogeron ML (2013), Chang YS (2013), Gotoh T (2014), Gotoh T (2014), Oi N (2014), Corcoran CA (2009), Corcoran CA (2009), Ayroldi E (2014), Wu G (2014), Rajendra R (2004), Zhang J (2014), Lee MG (2014), Lee MG (2014), Freedman DA (1997), Freedman DA (1997), Saxena A (2006), Shi D (2009), Lohrum MA (2001), Lohrum MA (2001), Grossman SR (2003), Yan S (2013), Xirodimas DP (2004), Yasuhara T (2014), Yasuhara T (2014), Yasuhara T (2014), Yasuhara T (2014), Saville MK (2004), Rodriguez MS (1999), Lui K (2013), Wu PY (2003), Pavithra L (2009), He Y (2013), Tan BX (2014), Huttlin EL (2015), Marcar L (2015), Borcherds W (2014), Borcherds W (2014), Li YC (2014), Ayroldi E (2014), Ling X (2014), Batuello CN (2015), Zhu N (2006), Mo XL (2015), Chen TC (2014), Stindt MH (2015), Caratozzolo MF (2014), Li X (2015), Saxena R (2016), Reed SM (2014), Du C (2016), Du C (2016), Du C (2016), Fraser JA (2015), Fraser JA (2015), Wu B (2015), Qin JJ (2015), Raza S (2015), Raza S (2015), Yamauchi T (2014), Yamauchi T (2014), Yamauchi T (2014), Shi Y (2010), Ahn HJ (2015), Lim KH (2015), Kang JH (2016), Chen J (2015), Liu X (2016), Yang P (2016), Yang P (2016), Liu D (2016), Liu D (2016), Liu D (2016), Datta D (2015), Reddy BA (2014), He X (2016), Shostak K (2014), Liu LJ (2016), Liu LJ (2016), Stegh AH (2010), Liu XH (2005), Medina-Medina I (2016), Medina-Medina I (2016), Kayama K (2017), Singh AK (2016), Liu WT (2016), Yue X (2016), Soares J (2015), Mukhopadhyay R (2016), Mukhopadhyay R (2016), Zhou X (2016), Zhou X (2016), Xie X (2016), Leao M (2015), Luo H (2016), Luo H (2016), Xie N (2016), Maeda R (2017), Maeda R (2017), Maeda R (2017), Sheng W (2017), Sheng W (2017), Liu M (2010), Huttlin EL (2017), Chauhan KM (2016), Goetz C (1999), Zhang J (2017), Unger T (1999), Liu Z (2004), Wu W (2015), Tan G (2017), Nomura K (2017), Lu W (2017), Lu W (2017), Hjerrild M (2001), Landre V (2017), Landre V (2017), Landre V (2017), Landre V (2017), Shangary S (2008), Shangary S (2008), Du WW (2017), Du WW (2017), Bista M (2013), Bista M (2013), Jin M (2017), LaRusch GA (2007), LaRusch GA (2007), Kurokawa M (2013), Ivanov AA (2017), Wong JH (2017), Wong JH (2017)	496
HNRNPU	12	RFC4	1	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Hein MY (2015)	3
ILF2	3	IGF2BP3	0	biochemical, affinity chromatography technology	Kristensen AR (2012), Huttlin EL (2017)	2
DDX1	6	RFC4	1	biochemical	Kristensen AR (2012)	1
RFC4	1	ABCF1	5	biochemical	Kristensen AR (2012)	1
EIF2B3	0	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
MDM2	2	NEDD4	2	unspecified method, enzymatic study, affinity chromatography technology	Burch LR (2004), Xu C (2014), Xu C (2014)	3
NEDD4	2	YY1	7	enzymatic study, affinity chromatography technology	Persaud A (2009), Persaud A (2009)	2
FKBP3	0	DYNLL1	0	biochemical	Kristensen AR (2012)	1
DIMT1	0	RFC4	1	biochemical	Kristensen AR (2012)	1
FKBP3	0	SYNCRIP	6	biochemical	Kristensen AR (2012)	1
EWSR1	2	HDAC2	1	biochemical	Havugimana PC (2012)	1
YBX1	1	TP53	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kojic S (2004), Okamoto T (2000), Okamoto T (2000), Tian B (2011), Fogeron ML (2013), Horikawa I (2014)	6
DIMT1	0	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
BARD1	4	YBX1	1	affinity chromatography technology	Woods NT (2012)	1
ILF2	3	HNRNPU	12	biochemical, affinity chromatography technology	Kristensen AR (2012), Hein MY (2015)	2
EIF2B3	0	DIMT1	0	biochemical	Kristensen AR (2012)	1
SRPK1	2	TP53	0	two hybrid, pull down, affinity chromatography technology	Peidis P (2011), Peidis P (2011), Peidis P (2011)	3
FKBP3	0	RTRAF	0	biochemical	Kristensen AR (2012)	1
NTRK1	1	NMT1	4	affinity chromatography technology	Emdal KB (2015)	1
EIF2B2	0	YBX1	1	biochemical	Kristensen AR (2012)	1
RTRAF	0	RFC4	1	biochemical	Kristensen AR (2012)	1
FKBP3	0	SEC16A	7	biochemical	Kristensen AR (2012)	1
NEDD4L	3	NTRK1	1	enzymatic study	Persaud A (2009)	1
KRT18	2	SEC16A	7	biochemical, affinity chromatography technology	Kristensen AR (2012), Hein MY (2015)	2
RFC4	1	NMT1	4	biochemical	Kristensen AR (2012)	1
FKBP3	0	HNRNPU	12	biochemical	Kristensen AR (2012)	1
EIF2B2	0	ILF2	3	biochemical	Kristensen AR (2012)	1
FKBP3	0	ILF2	3	biochemical	Kristensen AR (2012)	1
EDC4	4	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
DDX1	6	ILF2	3	biochemical	Kristensen AR (2012)	1
NELFB	7	ABCF1	5	biochemical	Kristensen AR (2012)	1
HNRNPU	12	SYNCRIP	6	two hybrid, two hybrid, biochemical, biochemical, affinity chromatography technology	Hegele A (2012), Hegele A (2012), Kristensen AR (2012), Wan C (2015), Hein MY (2015)	5
DDX1	6	NELFB	7	biochemical	Kristensen AR (2012)	1
FKBP3	0	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
EIF2B2	0	RFC4	1	biochemical	Kristensen AR (2012)	1
TP53	0	EWSR1	2	affinity chromatography technology	Li Y (2012)	1
FKBP3	0	MYH10	9	biochemical	Havugimana PC (2012)	1
TP53	0	FKBP3	0	affinity chromatography technology	Ochocka AM (2009)	1
DIMT1	0	NELFB	7	biochemical	Kristensen AR (2012)	1
HDAC2	1	YY1	7	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Yang WM (1997), Yao YL (2001), Kalenik JL (1997), Glenn DJ (2009), Sun JM (2007)	5
SYNCRIP	6	YBX1	1	biochemical, affinity chromatography technology	Havugimana PC (2012), Hein MY (2015)	2
NELFB	7	HNRNPU	12	biochemical	Kristensen AR (2012)	1
HDAC1	4	YY1	7	pull down, affinity chromatography technology, imaging technique, affinity chromatography technology	Yang WM (1997), He Y (2007), He G (2002), Sun JM (2007)	4
SMURF1	4	TP53	0	affinity chromatography technology	Nie J (2010)	1
SMURF1	4	SYNCRIP	6	affinity chromatography technology	Xie Y (2013)	1
NTRK1	1	LRRFIP1	6	affinity chromatography technology	Emdal KB (2015)	1
DIMT1	0	YBX1	1	biochemical	Kristensen AR (2012)	1
KRT18	2	RTRAF	0	biochemical	Kristensen AR (2012)	1
EIF2B2	0	NMT1	4	biochemical	Kristensen AR (2012)	1
FKBP3	0	EIF2B2	0	biochemical	Kristensen AR (2012)	1
FKBP3	0	DIMT1	0	biochemical	Kristensen AR (2012)	1
NTRK1	1	NELFB	7	affinity chromatography technology	Emdal KB (2015)	1
CEP19	0	SRPK1	2	bioid	Gupta GD (2015)	1
NELFB	7	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
HNRNPU	12	HNRNPA2B1	2	affinity chromatography technology	Hein MY (2015)	1
EDC4	4	DDX1	6	biochemical	Kristensen AR (2012)	1
MDM2	2	YY1	7	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Sui G (2004), Sui G (2004), Sui G (2004), Dolezelova P (2012)	4
CEP19	0	FKBP3	0	bioid	Gupta GD (2015)	1
NEDD4	2	HNRNPU	12	pull down	Ingham RJ (2005)	1
YBX1	1	NMT1	4	biochemical	Kristensen AR (2012)	1
NTRK1	1	HNRNPU	12	affinity chromatography technology	Emdal KB (2015)	1
NELFB	7	SYNCRIP	6	biochemical	Kristensen AR (2012)	1
MDM2	2	HNRNPU	12	affinity chromatography technology, affinity chromatography technology	Okoro DR (2013), Jacob AG (2014)	2
EIF2B2	0	DIMT1	0	biochemical	Kristensen AR (2012)	1
NTRK1	1	IGF2BP3	0	affinity chromatography technology	Emdal KB (2015)	1
CALM1	0	FKBP3	0	pull down	Shen X (2005)	1
NTRK1	1	TIMELESS	8	affinity chromatography technology	Emdal KB (2015)	1
EIF2B2	0	RTRAF	0	biochemical	Kristensen AR (2012)	1
DDX1	6	ABCF1	5	biochemical	Kristensen AR (2012)	1
NTRK1	1	ILF2	3	affinity chromatography technology	Emdal KB (2015)	1
RTRAF	0	SYNCRIP	6	biochemical	Kristensen AR (2012)	1
EIF2B3	0	DDX1	6	biochemical	Kristensen AR (2012)	1
HDAC1	4	MDM2	2	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Ito A (2002), Ito A (2002), Gaughan L (2005), Gaughan L (2005)	5
DDX1	6	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
HDAC1	4	FKBP3	0	affinity chromatography technology, affinity chromatography technology	Yang WM (2001), Yang WM (2001)	2
EIF2B3	0	NMT1	4	biochemical	Kristensen AR (2012)	1
TP53	0	HNRNPU	12	affinity chromatography technology	Fogeron ML (2013)	1
YY1	7	MTA2	1	pull down	Yao YL (2003)	1
SYNCRIP	6	ILF2	3	biochemical	Havugimana PC (2012)	1
MDM2	2	SMURF1	4	pull down, affinity chromatography technology, affinity chromatography technology	Nie J (2010), Nie J (2010), Nie J (2010)	3
LRRFIP1	6	DDX1	6	biochemical	Kristensen AR (2012)	1
NEDD4L	3	FKBP3	0	enzymatic study, pull down	Persaud A (2009), Persaud A (2009)	2
EIF2B3	0	RTRAF	0	biochemical	Kristensen AR (2012)	1
TP53	0	MTA2	1	pull down, affinity chromatography technology, pull down	Yao YL (2003), Luo J (2000), Luo J (2000)	3
NEDD4	2	NTRK1	1	affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, affinity chromatography technology	Arevalo JC (2006), Arevalo JC (2006), Arevalo JC (2006), Georgieva MV (2011), Georgieva MV (2011), Persaud A (2009), Persaud A (2009), Emdal KB (2015)	8
MAP1S	3	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
IGF2BP3	0	HNRNPU	12	biochemical, affinity chromatography technology	Kristensen AR (2012), Hein MY (2015)	2
EIF2B3	0	ILF2	3	biochemical	Kristensen AR (2012)	1
MAP1S	3	SYNCRIP	6	biochemical	Kristensen AR (2012)	1
DIMT1	0	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
NTRK1	1	ABCF1	5	affinity chromatography technology	Emdal KB (2015)	1
DDX1	6	YBX1	1	biochemical	Kristensen AR (2012)	1
EIF2B3	0	RFC4	1	biochemical	Kristensen AR (2012)	1
FKBP3	0	TIMELESS	8	biochemical	Havugimana PC (2012)	1
NTRK1	1	MTA2	1	affinity chromatography technology	Emdal KB (2015)	1
FKBP3	0	YY1	7	affinity chromatography technology, affinity chromatography technology, pull down	Yang WM (2001), Yang WM (2001), Yang WM (2001)	3
TP53	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Wang C (2005), Dohi Y (2008), Jin W (2008), Lei Q (2006), Wu Y (2001), Wu Y (2001), Luo J (2000), Juan LJ (2000), Juan LJ (2000), Juan LJ (2000), Murphy M (1999), Insinga A (2004), Sun JM (2007), Yu XY (2010), Sinha S (2010), Sinha S (2010), Li Y (2012), Di Agostino S (2006), Pavithra L (2009), Pavithra L (2009), Luo J (2000), Chen TC (2014), Park EK (2015), Park EK (2015), Park EK (2015)	26
FKBP3	0	EDC4	4	biochemical	Kristensen AR (2012)	1
FKBP3	0	ABCF1	5	biochemical	Kristensen AR (2012)	1
RTRAF	0	NMT1	4	biochemical	Kristensen AR (2012)	1
MDM2	2	IGF2BP3	0	affinity chromatography technology	Okoro DR (2013)	1
SMURF1	4	HNRNPA2B1	2	affinity chromatography technology	Xie Y (2013)	1
NTRK1	1	DDX1	6	affinity chromatography technology	Emdal KB (2015)	1
SRPK1	2	FKBP3	0	enzymatic study	Varjosalo M (2013)	1
TP53	0	HDAC2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li P (2010), Insinga A (2004), Sun JM (2007), Tian B (2011), Adenuga D (2010), Brandl A (2012)	6
CEP19	0	NMT1	4	bioid	Gupta GD (2015)	1
RFC4	1	ILF2	3	biochemical	Kristensen AR (2012)	1
CALM1	0	YBX1	1	pull down	Shen X (2005)	1
FKBP3	0	MTA2	1	pull down	Yao YL (2003)	1
TP53	0	HNRNPA2B1	2	affinity chromatography technology	Fogeron ML (2013)	1
BARD1	4	EWSR1	2	affinity chromatography technology, pull down, fluorescent resonance energy transfe, two hybrid	Spahn L (2002), Spahn L (2002), Spahn L (2002), Spahn L (2002)	4
EWSR1	2	CALM1	0	pull down	Deloulme JC (1997)	1
RTRAF	0	ILF2	3	biochemical	Kristensen AR (2012)	1
FBXO25	1	MYH10	9	affinity chromatography technology	Teixeira FR (2010)	1
RFC4	1	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
EWSR1	2	RFC4	1	bioid	Elzi DJ (2014)	1
SMURF1	4	YBX1	1	affinity chromatography technology	Xie Y (2013)	1
MTA2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Zhang Y (1999), Banach-Orlowska M (2009), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	14
DDX1	6	HNRNPU	12	biochemical	Kristensen AR (2012)	1
IGF2BP3	0	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
HDAC1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), You A (2001), Zhang Y (1999), Zhang Y (1999), Yasui D (2002), Banach-Orlowska M (2009), Banach-Orlowska M (2009), Cui Y (2006), Pflum MK (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Zhang Y (1998), Terhune SS (2010), Opsahl JA (2010), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Kristensen AR (2012), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	27
FKBP3	0	RFC4	1	biochemical	Kristensen AR (2012)	1
NMT1	4	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
ABCF1	5	HNRNPA2B1	2	biochemical	Kristensen AR (2012)	1
NTRK1	1	HNRNPA2B1	2	affinity chromatography technology	Emdal KB (2015)	1
NTRK1	1	SEC16A	7	affinity chromatography technology	Emdal KB (2015)	1
NTRK1	1	RTRAF	0	affinity chromatography technology	Emdal KB (2015)	1
FKBP3	0	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
NMT1	4	TP53	0	affinity chromatography technology	Selvakumar P (2006)	1
EIF2B2	0	EDC4	4	biochemical	Kristensen AR (2012)	1
EDC4	4	ABCF1	5	biochemical	Kristensen AR (2012)	1
EIF2B2	0	NELFB	7	biochemical	Kristensen AR (2012)	1
NTRK1	1	HDAC2	1	affinity chromatography technology	Emdal KB (2015)	1
EIF2B3	0	NELFB	7	biochemical	Kristensen AR (2012)	1
BARD1	4	SRPK1	2	affinity chromatography technology	Woods NT (2012)	1
ABCF1	5	HNRNPU	12	biochemical	Kristensen AR (2012)	1
EIF2B2	0	IGF2BP3	0	biochemical	Kristensen AR (2012)	1
FKBP3	0	KRT18	2	biochemical	Kristensen AR (2012)	1
EIF2B2	0	DDX1	6	biochemical	Kristensen AR (2012)	1