PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000382535	[[29235049, 29235219], [29236286, 29238870]]	[[29236485, 29237955]]
ENST00000313071	[[29236286, 29238870]]	[[29236485, 29237955]]
NM_005249	[[29236277, 29239483]]	[[29236485, 29237955]]

Promoter

Chrom	Start	End	Description
chr14	29234581	29234601	CAGE_peak_2_at_FOXG1_5end
chr14	29234618	29234628	CAGE_peak_8_at_FOXG1_5end
chr14	29234870	29234930	CAGE_peak_7_at_FOXG1_5end
chr14	29235961	29236008	CAGE_peak_1_at_FOXG1_5end
chr14	29236169	29236216	CAGE_peak_6_at_FOXG1_5end
chr14	29236269	29236285	CAGE_peak_3_at_FOXG1_5end
chr14	29236301	29236317	CAGE_peak_5_at_FOXG1_5end
chr14	29236460	29236467	CAGE_peak_12_at_FOXG1_5end
chr14	29236510	29236521	CAGE_peak_9_at_FOXG1_5end
chr14	29236997	29237007	CAGE_peak_11_at_FOXG1_5end
chr14	29237009	29237049	CAGE_peak_4_at_FOXG1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I028770	28770109	28771440	0.63	[{'connected_gene': 'LINC01551', 'score': 550.77}, {'connected_gene': 'FOXG1-AS1', 'score': 0.44}, {'connected_gene': 'FOXG1', 'score': 0.39}]
chr14	GH14I028707	28707627	28708554	0.2	[{'connected_gene': 'BNIP3P1', 'score': 6.62}, {'connected_gene': 'BTF3P2', 'score': 0.29}, {'connected_gene': 'FOXG1', 'score': 0.23}]
chr14	GH14I028676	28676017	28677579	0.64	[{'connected_gene': 'BTF3P2', 'score': 0.77}, {'connected_gene': 'FOXG1', 'score': 0.18}]
chr14	GH14I028774	28774495	28774991	1.17	[{'connected_gene': 'FOXG1', 'score': 23.77}, {'connected_gene': 'LINC01551', 'score': 0.77}, {'connected_gene': 'LINC02282', 'score': 0.39}]
chr14	GH14I028762	28759107	28759266	0.31	[{'connected_gene': 'FOXG1', 'score': 550.77}, {'connected_gene': 'FOXG1-AS1', 'score': 0.44}, {'connected_gene': 'BTF3P2', 'score': 0.17}]
chr14	GH14I028759	28759395	28759706	0.81	[{'connected_gene': 'FOXG1', 'score': 559.71}, {'connected_gene': 'FOXG1-AS1', 'score': 0.44}, {'connected_gene': 'BTF3P2', 'score': 0.17}]
chr14	GH14I028760	28760012	28760253	0.43	[{'connected_gene': 'FOXG1', 'score': 550.77}, {'connected_gene': 'FOXG1-AS1', 'score': 0.44}, {'connected_gene': 'BTF3P2', 'score': 0.17}]
chr14	GH14I028756	28756869	28758467	1.12	[{'connected_gene': 'FOXG1', 'score': 0.77}, {'connected_gene': 'FOXG1-AS1', 'score': 0.44}, {'connected_gene': 'BTF3P2', 'score': 0.18}]
chr14	GH14I028761	28761058	28763058	0.46	[{'connected_gene': 'FOXG1', 'score': 550.77}, {'connected_gene': 'FOXG1-AS1', 'score': 0.77}]
chr14	GH14I028377	28377738	28378079	0.23	[{'connected_gene': 'FOXG1', 'score': 2.52}, {'connected_gene': 'PIR47837', 'score': 0.26}, {'connected_gene': 'ENSG00000257869', 'score': 0.22}]
chr14	GH14I028769	28769368	28769664	0.78	[{'connected_gene': 'FOXG1-AS1', 'score': 0.77}, {'connected_gene': 'LINC01551', 'score': 0.77}, {'connected_gene': 'FOXG1', 'score': 0.44}]
chr14	GH14I028764	28764603	28768769	1.88	[{'connected_gene': 'FOXG1-AS1', 'score': 550.77}, {'connected_gene': 'FOXG1', 'score': 550.44}, {'connected_gene': 'LINC01551', 'score': 0.44}]
chr14	GH14I028763	28763942	28764340	1.13	[{'connected_gene': 'FOXG1-AS1', 'score': 550.77}, {'connected_gene': 'FOXG1', 'score': 0.77}]
chr14	GH14I028876	28876095	28876884	0.93	[{'connected_gene': 'GC14P028876', 'score': 550.77}, {'connected_gene': 'FOXG1', 'score': 6.41}, {'connected_gene': 'GC14P028879', 'score': 0.77}, {'connected_gene': 'LINC02327', 'score': 0.25}]