PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000259806	[[1390068, 1391353], [1394930, 1395832]]	[[1390182, 1391353], [1394930, 1395094]]
NM_001452	[[1390068, 1391353], [1394930, 1395832]]	[[1390182, 1391353], [1394930, 1395094]]

Promoter

Chrom	Start	End	Description
chr6	1389789	1389821	CAGE_peak_1_at_FOXF2_5end
chr6	1389824	1389840	CAGE_peak_3_at_FOXF2_5end
chr6	1389871	1389876	CAGE_peak_4_at_FOXF2_5end
chr6	1389989	1390019	CAGE_peak_2_at_FOXF2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I001198	1198934	1202618	0.49	[{'connected_gene': 'FOXQ1', 'score': 6.03}, {'connected_gene': 'FOXF2', 'score': 4.93}, {'connected_gene': 'GC06P001197', 'score': 0.77}, {'connected_gene': 'GC06P001205', 'score': 0.44}]
chr6	GH06I001381	1381646	1397255	2.45	[{'connected_gene': 'FOXF2', 'score': 552.76}, {'connected_gene': 'MIR6720', 'score': 550.77}, {'connected_gene': 'GC06M001386', 'score': 550.77}, {'connected_gene': 'GC06P001387', 'score': 550.77}, {'connected_gene': 'LOC105374880', 'score': 550.77}, {'connected_gene': 'GC06P001380', 'score': 0.44}, {'connected_gene': 'GC06M001396', 'score': 0.44}]
chr6	GH06I001418	1418277	1419089	0.52	[{'connected_gene': 'FOXF2', 'score': 12.27}, {'connected_gene': 'GC06M001423', 'score': 0.44}, {'connected_gene': 'GC06M001405', 'score': 0.39}]
chr6	GH06I001414	1414703	1415013	0.24	[{'connected_gene': 'FOXF2', 'score': 12.27}, {'connected_gene': 'GC06M001405', 'score': 0.44}, {'connected_gene': 'GC06M001423', 'score': 0.39}]