PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000261263	[[72148653, 72149068], [72163579, 72163639], [72164371, 72164479], [72167738, 72167802], [72175810, 72175865], [72176349, 72176438], [72179310, 72184699]]	[[72148909, 72149068], [72163579, 72163639], [72164371, 72164479], [72167738, 72167802], [72175810, 72175865], [72176349, 72176438], [72179310, 72179453]]
ENST00000358546	[[72164315, 72164479], [72167738, 72167802], [72175810, 72175865], [72176349, 72176438], [72179310, 72179699]]	None
ENST00000547246	[[72164389, 72164479], [72167738, 72168080]]	None
ENST00000552686	[[72176193, 72176438], [72179310, 72179469]]	None
NM_014999	[[72148642, 72149068], [72163579, 72163639], [72164371, 72164479], [72167738, 72167802], [72175810, 72175865], [72176349, 72176438], [72179310, 72187256]]	[[72148909, 72149068], [72163579, 72163639], [72164371, 72164479], [72167738, 72167802], [72175810, 72175865], [72176349, 72176438], [72179310, 72179453]]

Promoter

Chrom	Start	End	Description
chr12	72148614	72148699	CAGE_peak_1_at_RAB21_5end
chr12	72148728	72148739	CAGE_peak_3_at_RAB21_5end
chr12	72148820	72148829	CAGE_peak_4_at_RAB21_5end
chr12	72148996	72149025	CAGE_peak_2_at_RAB21_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I071782	71782084	71782594	0.43	[{'connected_gene': 'TBC1D15', 'score': 12.73}, {'connected_gene': 'RAB21', 'score': 12.11}, {'connected_gene': 'TPH2', 'score': 11.3}, {'connected_gene': 'ENSG00000257410', 'score': 0.37}]
chr12	GH12I071780	71780158	71781250	0.56	[{'connected_gene': 'TBC1D15', 'score': 12.73}, {'connected_gene': 'RAB21', 'score': 12.11}, {'connected_gene': 'TPH2', 'score': 11.3}, {'connected_gene': 'ENSG00000257410', 'score': 0.37}]
chr12	GH12I071787	71787721	71787870	0.54	[{'connected_gene': 'TBC1D15', 'score': 12.03}, {'connected_gene': 'TPH2', 'score': 10.38}, {'connected_gene': 'ENSG00000257410', 'score': 0.39}, {'connected_gene': 'RAB21', 'score': 0.29}]
chr12	GH12I071747	71747101	71747250	0.64	[{'connected_gene': 'TMEM19', 'score': 11.39}, {'connected_gene': 'ZFC3H1', 'score': 11.13}, {'connected_gene': 'THAP2', 'score': 11.12}, {'connected_gene': 'ENSG00000212461', 'score': 10.96}, {'connected_gene': 'RAB21', 'score': 0.44}, {'connected_gene': 'ENSG00000257515', 'score': 0.28}]
chr12	GH12I071719	71719592	71720743	0.31	[{'connected_gene': 'TMEM19', 'score': 11.25}, {'connected_gene': 'ZFC3H1', 'score': 10.99}, {'connected_gene': 'ENSG00000257515', 'score': 6.51}, {'connected_gene': 'RAB21', 'score': 0.29}]
chr12	GH12I071731	71731471	71732469	1.13	[{'connected_gene': 'TMEM19', 'score': 11.77}, {'connected_gene': 'ZFC3H1', 'score': 11.57}, {'connected_gene': 'ENSG00000257515', 'score': 6.69}, {'connected_gene': 'RAB21', 'score': 0.34}]
chr12	GH12I071721	71721888	71722428	0.62	[{'connected_gene': 'TMEM19', 'score': 11.23}, {'connected_gene': 'ZFC3H1', 'score': 10.99}, {'connected_gene': 'ENSG00000257515', 'score': 0.39}, {'connected_gene': 'RAB21', 'score': 0.29}]
chr12	GH12I071753	71753104	71753160	0.89	[{'connected_gene': 'RAB21', 'score': 550.77}, {'connected_gene': 'TMEM19', 'score': 11.42}, {'connected_gene': 'ZFC3H1', 'score': 11.24}, {'connected_gene': 'THAP2', 'score': 11.23}, {'connected_gene': 'ENSG00000212461', 'score': 10.82}, {'connected_gene': 'ENSG00000257515', 'score': 0.26}]
chr12	GH12I071754	71754080	71756872	2.06	[{'connected_gene': 'RAB21', 'score': 550.77}, {'connected_gene': 'ZFC3H1', 'score': 31.45}, {'connected_gene': 'TBC1D15', 'score': 10.15}, {'connected_gene': 'ENSG00000257410', 'score': 0.26}]
chr12	GH12I071799	71799001	71799201	0.2	[{'connected_gene': 'ENSG00000257410', 'score': 550.77}, {'connected_gene': 'TBC1D15', 'score': 11.11}, {'connected_gene': 'TPH2', 'score': 10.0}, {'connected_gene': 'RAB21', 'score': 0.26}]
chr12	GH12I071709	71709677	71711350	0.83	[{'connected_gene': 'ENSG00000257515', 'score': 557.44}, {'connected_gene': 'TMEM19', 'score': 12.17}, {'connected_gene': 'ZFC3H1', 'score': 11.08}, {'connected_gene': 'RAB21', 'score': 0.26}]