PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000278505	[[94822973, 94823391], [94861540, 94865809]]	[[94823091, 94823391], [94861540, 94862743]]
NM_015036	[[94822973, 94823391], [94861540, 94865815]]	[[94823091, 94823391], [94861540, 94862743]]

Promoter

Chrom	Start	End	Description
chr11	94822729	94822744	CAGE_peak_7_at_ENDOD1_5end
chr11	94822746	94822757	CAGE_peak_8_at_ENDOD1_5end
chr11	94822968	94823042	CAGE_peak_1_at_ENDOD1_5end
chr11	94823060	94823069	CAGE_peak_2_at_ENDOD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I095156	95156263	95158392	0.54	[{'connected_gene': 'ENDOD1', 'score': 18.82}, {'connected_gene': 'CEP57', 'score': 11.02}, {'connected_gene': 'FAM76B', 'score': 11.02}, {'connected_gene': 'SESN3', 'score': 9.74}, {'connected_gene': 'GC11M095158', 'score': 0.77}, {'connected_gene': 'LOC101929295', 'score': 0.44}]
chr11	GH11I095140	95140367	95141466	0.76	[{'connected_gene': 'ENDOD1', 'score': 19.29}, {'connected_gene': 'KDM4E', 'score': 9.59}, {'connected_gene': 'GC11P095138', 'score': 0.77}, {'connected_gene': 'BUD13P1', 'score': 0.77}]
chr11	GH11I095088	95088429	95091308	2.13	[{'connected_gene': 'ENDOD1', 'score': 558.47}, {'connected_gene': 'GC11P095088', 'score': 550.77}, {'connected_gene': 'SRSF8', 'score': 17.07}, {'connected_gene': 'LOC101929295', 'score': 11.03}, {'connected_gene': 'KDM4E', 'score': 9.77}, {'connected_gene': 'GC11P095093', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.39}]
chr11	GH11I095098	95098550	95100313	0.91	[{'connected_gene': 'ENDOD1', 'score': 11.37}, {'connected_gene': 'LOC101929295', 'score': 11.01}, {'connected_gene': 'FAM76B', 'score': 4.42}, {'connected_gene': 'GC11M095076', 'score': 0.77}, {'connected_gene': 'GC11P095093', 'score': 0.44}]
chr11	GH11I095076	95076177	95076924	0.87	[{'connected_gene': 'ENDOD1', 'score': 19.81}, {'connected_gene': 'LOC101929295', 'score': 11.63}, {'connected_gene': 'GC11P095067', 'score': 0.44}, {'connected_gene': 'GC11P095083', 'score': 0.44}, {'connected_gene': 'GC11M095076', 'score': 0.31}]
chr11	GH11I095133	95133070	95135995	1.02	[{'connected_gene': 'ENDOD1', 'score': 23.8}, {'connected_gene': 'BUD13P1', 'score': 15.6}, {'connected_gene': 'ENSG00000270578', 'score': 13.63}, {'connected_gene': 'CWC15', 'score': 10.44}, {'connected_gene': 'KDM4D', 'score': 10.44}, {'connected_gene': 'KDM4E', 'score': 9.76}, {'connected_gene': 'SRSF8', 'score': 4.99}, {'connected_gene': 'LOC105369435', 'score': 4.66}, {'connected_gene': 'GC11P095138', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.29}]
chr11	GH11I095119	95119306	95120487	0.58	[{'connected_gene': 'ENDOD1', 'score': 5.19}, {'connected_gene': 'GC11P095138', 'score': 0.37}, {'connected_gene': 'GC11M095076', 'score': 0.37}]
chr11	GH11I095123	95123404	95124008	0.2	[{'connected_gene': 'ENDOD1', 'score': 5.22}, {'connected_gene': 'GC11P095138', 'score': 0.39}, {'connected_gene': 'GC11M095076', 'score': 0.34}]
chr11	GH11I095252	95252327	95257755	1.55	[{'connected_gene': 'SESN3', 'score': 12.14}, {'connected_gene': 'LOC101929295', 'score': 11.94}, {'connected_gene': 'ENDOD1', 'score': 4.96}, {'connected_gene': 'GC11M095260', 'score': 0.44}, {'connected_gene': 'GC11M095250', 'score': 0.18}]
chr11	GH11I095066	95066276	95069947	2.28	[{'connected_gene': 'SRSF8', 'score': 563.59}, {'connected_gene': 'GC11P095067', 'score': 550.77}, {'connected_gene': 'GC11M095066', 'score': 550.77}, {'connected_gene': 'ENDOD1', 'score': 17.07}, {'connected_gene': 'LOC101929295', 'score': 11.86}, {'connected_gene': 'KDM4E', 'score': 10.68}, {'connected_gene': 'CWC15', 'score': 10.61}, {'connected_gene': 'KDM4D', 'score': 10.61}, {'connected_gene': 'MTMR2', 'score': 10.42}, {'connected_gene': 'GC11P095083', 'score': 0.37}]
chr11	GH11I095077	95077821	95079302	0.31	[{'connected_gene': 'SRSF8', 'score': 12.78}, {'connected_gene': 'ENDOD1', 'score': 11.79}, {'connected_gene': 'LOC101929295', 'score': 11.63}, {'connected_gene': 'GC11P095083', 'score': 0.77}, {'connected_gene': 'GC11P095067', 'score': 0.39}, {'connected_gene': 'GC11M095076', 'score': 0.34}]
chr11	GH11I095085	95085954	95086553	0.56	[{'connected_gene': 'SRSF8', 'score': 17.36}, {'connected_gene': 'ENDOD1', 'score': 6.05}, {'connected_gene': 'GC11P095088', 'score': 0.77}, {'connected_gene': 'GC11P095083', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.37}]
chr11	GH11I095074	95074517	95075493	1.04	[{'connected_gene': 'SRSF8', 'score': 14.45}, {'connected_gene': 'LOC101929295', 'score': 11.62}, {'connected_gene': 'ENDOD1', 'score': 5.67}, {'connected_gene': 'GC11P095067', 'score': 0.44}, {'connected_gene': 'GC11P095083', 'score': 0.44}]
chr11	GH11I095080	95080052	95080870	0.2	[{'connected_gene': 'SRSF8', 'score': 12.32}, {'connected_gene': 'LOC101929295', 'score': 11.63}, {'connected_gene': 'ENDOD1', 'score': 8.77}, {'connected_gene': 'GC11P095083', 'score': 0.77}, {'connected_gene': 'GC11P095067', 'score': 0.39}, {'connected_gene': 'GC11M095076', 'score': 0.34}]
chr11	GH11I095146	95146608	95154450	2.25	[{'connected_gene': 'LOC101929295', 'score': 556.79}, {'connected_gene': 'CEP57', 'score': 20.31}, {'connected_gene': 'FAM76B', 'score': 16.44}, {'connected_gene': 'FGFR3P2', 'score': 15.64}, {'connected_gene': 'SESN3', 'score': 15.61}, {'connected_gene': 'ANKRD49', 'score': 13.94}, {'connected_gene': 'MRE11', 'score': 12.94}, {'connected_gene': 'SRSF8', 'score': 7.48}, {'connected_gene': 'ENDOD1', 'score': 6.65}, {'connected_gene': 'LOC105369435', 'score': 5.31}, {'connected_gene': 'CWC15', 'score': 1.93}, {'connected_gene': 'KDM4E', 'score': 1.7}, {'connected_gene': 'ENSG00000270578', 'score': 0.44}]
chr11	GH11I095097	95097133	95098135	0.31	[{'connected_gene': 'LOC101929295', 'score': 11.02}, {'connected_gene': 'CWC15', 'score': 10.04}, {'connected_gene': 'KDM4D', 'score': 10.04}, {'connected_gene': 'KDM4E', 'score': 9.42}, {'connected_gene': 'GC11M095076', 'score': 0.77}, {'connected_gene': 'GC11P095093', 'score': 0.77}, {'connected_gene': 'ENDOD1', 'score': 0.44}]
chr11	GH11I095106	95106008	95109872	1.64	[{'connected_gene': 'LOC101929295', 'score': 11.29}, {'connected_gene': 'CWC15', 'score': 9.3}, {'connected_gene': 'KDM4D', 'score': 9.3}, {'connected_gene': 'ENDOD1', 'score': 5.93}, {'connected_gene': 'GC11M095076', 'score': 0.44}, {'connected_gene': 'GC11P095138', 'score': 0.29}]
chr11	GH11I095103	95102917	95105789	0.72	[{'connected_gene': 'LOC101929295', 'score': 11.17}, {'connected_gene': 'KDM4E', 'score': 10.27}, {'connected_gene': 'CWC15', 'score': 9.3}, {'connected_gene': 'KDM4D', 'score': 9.3}, {'connected_gene': 'SRSF8', 'score': 6.8}, {'connected_gene': 'ENDOD1', 'score': 4.81}, {'connected_gene': 'GC11M095076', 'score': 0.77}, {'connected_gene': 'GC11P095138', 'score': 0.29}]
chr11	GH11I095095	95095413	95097075	1.14	[{'connected_gene': 'LOC101929295', 'score': 11.04}, {'connected_gene': 'ENDOD1', 'score': 10.99}, {'connected_gene': 'CWC15', 'score': 10.04}, {'connected_gene': 'KDM4D', 'score': 10.04}, {'connected_gene': 'KDM4E', 'score': 9.48}, {'connected_gene': 'GC11P095093', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.44}]
chr11	GH11I095143	95143237	95143386	0.31	[{'connected_gene': 'BUD13P1', 'score': 550.77}, {'connected_gene': 'ENDOD1', 'score': 10.72}, {'connected_gene': 'KDM4E', 'score': 9.59}, {'connected_gene': 'GC11P095138', 'score': 0.77}]
chr11	GH11I095100	95100817	95102538	0.76	[{'connected_gene': 'GC11M095076', 'score': 550.77}, {'connected_gene': 'ENDOD1', 'score': 12.63}, {'connected_gene': 'LOC101929295', 'score': 11.02}, {'connected_gene': 'SRSF8', 'score': 5.38}, {'connected_gene': 'GC11P095093', 'score': 0.44}]
chr11	GH11I095084	95084562	95085822	0.65	[{'connected_gene': 'GC11P095083', 'score': 550.77}, {'connected_gene': 'SRSF8', 'score': 17.59}, {'connected_gene': 'ENDOD1', 'score': 7.45}, {'connected_gene': 'GC11P095088', 'score': 0.77}, {'connected_gene': 'GC11M095076', 'score': 0.37}]
chr11	GH11I095091	95091362	95094060	1.45	[{'connected_gene': 'GC11P095093', 'score': 550.77}, {'connected_gene': 'LOC101929295', 'score': 11.04}, {'connected_gene': 'KDM4E', 'score': 9.77}, {'connected_gene': 'ENDOD1', 'score': 8.46}, {'connected_gene': 'SRSF8', 'score': 7.01}, {'connected_gene': 'GC11M095076', 'score': 0.44}]
chr11	GH11I095102	95102717	95102866	0.4	[{'connected_gene': 'GC11M095076', 'score': 550.77}, {'connected_gene': 'LOC101929295', 'score': 11.04}, {'connected_gene': 'ENDOD1', 'score': 0.39}, {'connected_gene': 'GC11P095138', 'score': 0.28}]