PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000504595	[[15500304, 15500822], [15616091, 15616181], [15927998, 15928610], [15936558, 15939900]]	[[15500785, 15500822], [15616091, 15616181], [15927998, 15928610], [15936558, 15937295]]
ENST00000510662	[[15501546, 15501832], [15616091, 15616181], [15927998, 15928610], [15936558, 15937328]]	[[15928012, 15928610], [15936558, 15937295]]
ENST00000329673	[[15616090, 15616181], [15927998, 15928610], [15936558, 15937295]]	[[15616090, 15616181], [15927998, 15928610], [15936558, 15937295]]
NM_012304	[[15500304, 15500822], [15616091, 15616181], [15927998, 15928610], [15936558, 15939905]]	[[15500785, 15500822], [15616091, 15616181], [15927998, 15928610], [15936558, 15937295]]
NM_001278317	[[15501546, 15501832], [15616091, 15616181], [15927998, 15928610], [15936558, 15939905]]	[[15928012, 15928610], [15936558, 15937295]]

Promoter

Chrom	Start	End	Description
chr5	15500248	15500261	CAGE_peak_2_at_FBXL7_5end
chr5	15500280	15500312	CAGE_peak_1_at_FBXL7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I015425	15425516	15426304	0.6	[{'connected_gene': 'FBXL7', 'score': 1.26}, {'connected_gene': 'LOC391741', 'score': 0.34}, {'connected_gene': 'GC05M015415', 'score': 0.29}, {'connected_gene': 'MARK2P5', 'score': 0.26}]
chr5	GH05I015612	15612759	15612818	0.5	[{'connected_gene': 'FBXL7', 'score': 550.14}, {'connected_gene': 'CTD-2350J17.1', 'score': 0.77}, {'connected_gene': 'PIR59856', 'score': 0.31}]
chr5	GH05I015693	15693175	15696145	0.58	[{'connected_gene': 'FBXL7', 'score': 10.56}, {'connected_gene': 'GC05P015701', 'score': 0.44}, {'connected_gene': 'GC05P015675', 'score': 0.37}]
chr5	GH05I015719	15718705	15720076	0.38	[{'connected_gene': 'FBXL7', 'score': 10.01}, {'connected_gene': 'GC05M015718', 'score': 0.44}, {'connected_gene': 'GC05P015701', 'score': 0.37}]
chr5	GH05I015808	15808000	15808201	0.38	[{'connected_gene': 'FBXL7', 'score': 4.78}, {'connected_gene': 'GC05P015799', 'score': 0.44}, {'connected_gene': 'PIR33607', 'score': 0.29}]
chr5	GH05I015499	15499588	15502838	1.67	[{'connected_gene': 'FBXL7', 'score': 550.77}, {'connected_gene': 'PIR59856', 'score': 0.17}]
chr5	GH05I015509	15509611	15510562	0.2	[{'connected_gene': 'FBXL7', 'score': 0.44}, {'connected_gene': 'PIR59856', 'score': 0.18}]
chr5	GH05I015510	15510932	15511081	0.2	[{'connected_gene': 'FBXL7', 'score': 0.39}, {'connected_gene': 'PIR59856', 'score': 0.18}]
chr5	GH05I015532	15532749	15533808	0.2	[{'connected_gene': 'FBXL7', 'score': 0.29}, {'connected_gene': 'PIR59856', 'score': 0.23}]
chr5	GH05I015645	15645202	15645999	0.38	[{'connected_gene': 'CTD-2350J17.1', 'score': 0.29}, {'connected_gene': 'GC05P015675', 'score': 0.29}, {'connected_gene': 'FBXL7', 'score': 0.11}]
chr5	GH05I015620	15620035	15622141	0.72	[{'connected_gene': 'CTD-2350J17.1', 'score': 10.68}, {'connected_gene': 'GC05P015675', 'score': 0.23}, {'connected_gene': 'FBXL7', 'score': 0.13}]
chr5	GH05I015646	15646492	15646641	0.2	[{'connected_gene': 'CTD-2350J17.1', 'score': 7.21}, {'connected_gene': 'GC05P015675', 'score': 0.31}, {'connected_gene': 'FBXL7', 'score': 0.11}]
chr5	GH05I015634	15634581	15636104	0.2	[{'connected_gene': 'CTD-2350J17.1', 'score': 13.41}, {'connected_gene': 'GC05P015675', 'score': 0.26}, {'connected_gene': 'FBXL7', 'score': 0.12}]
chr5	GH05I015929	15929351	15930681	0.2	[{'connected_gene': 'MIR887', 'score': 0.44}, {'connected_gene': 'GC05P015848', 'score': 0.18}, {'connected_gene': 'FBXL7', 'score': 0.04}]
chr5	GH05I015917	15917780	15917889	0.35	[{'connected_gene': 'MIR887', 'score': 0.37}, {'connected_gene': 'GC05P015848', 'score': 0.2}, {'connected_gene': 'FBXL7', 'score': 0.05}]
chr5	GH05I015938	15938568	15939969	0.38	[{'connected_gene': 'MIR887', 'score': 0.77}, {'connected_gene': 'RNA5SP178', 'score': 0.16}, {'connected_gene': 'FBXL7', 'score': 0.05}]
chr5	GH05I016460	16460582	16468355	2.27	[{'connected_gene': 'GC05P016465', 'score': 550.77}, {'connected_gene': 'ZNF622', 'score': 550.44}, {'connected_gene': 'LINC02150', 'score': 14.85}, {'connected_gene': 'FBXL7', 'score': 9.68}, {'connected_gene': 'GC05P016453', 'score': 0.39}]
chr5	GH05I015577	15577201	15577400	0.43	[{'connected_gene': 'PIR59856', 'score': 0.39}, {'connected_gene': 'FBXL7', 'score': 0.18}]
chr5	GH05I015794	15794358	15795256	0.38	[{'connected_gene': 'GC05P015792', 'score': 550.77}, {'connected_gene': 'FBXL7', 'score': 5.43}, {'connected_gene': 'GC05P015799', 'score': 0.44}]
chr5	GH05I015573	15573692	15573841	0.31	[{'connected_gene': 'PIR59856', 'score': 0.39}, {'connected_gene': 'FBXL7', 'score': 0.19}]
chr5	GH05I015834	15834537	15835383	0.74	[{'connected_gene': 'PIR33607', 'score': 0.44}, {'connected_gene': 'GC05P015799', 'score': 0.28}, {'connected_gene': 'FBXL7', 'score': 0.06}]
chr5	GH05I015553	15553755	15555856	0.51	[{'connected_gene': 'PIR59856', 'score': 0.29}, {'connected_gene': 'FBXL7', 'score': 0.23}]
chr5	GH05I015552	15552048	15552914	0.2	[{'connected_gene': 'PIR59856', 'score': 0.29}, {'connected_gene': 'FBXL7', 'score': 0.23}]
chr5	GH05I015718	15718492	15718641	0.2	[{'connected_gene': 'GC05M015718', 'score': 0.44}, {'connected_gene': 'GC05P015701', 'score': 0.37}, {'connected_gene': 'FBXL7', 'score': 0.08}]
chr5	GH05I015752	15752797	15753400	0.2	[{'connected_gene': 'GC05P015770', 'score': 0.37}, {'connected_gene': 'GC05M015718', 'score': 0.34}, {'connected_gene': 'FBXL7', 'score': 0.07}]
chr5	GH05I015703	15703844	15704721	0.31	[{'connected_gene': 'GC05P015701', 'score': 0.77}, {'connected_gene': 'GC05M015718', 'score': 0.34}, {'connected_gene': 'FBXL7', 'score': 0.08}]
chr5	GH05I015701	15701851	15703211	0.77	[{'connected_gene': 'GC05P015701', 'score': 550.77}, {'connected_gene': 'GC05M015718', 'score': 0.31}, {'connected_gene': 'FBXL7', 'score': 0.08}]