PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000294383	[[55532031, 55534780], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541196], [55542907, 55542973], [55544210, 55544324], [55545210, 55545332], [55546994, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55551711], [55555299, 55555413], [55557695, 55557799], [55558493, 55558589], [55559609, 55559760], [55560927, 55561069], [55562170, 55562295], [55562624, 55562845], [55563270, 55563390], [55563615, 55563757], [55564148, 55564231], [55565443, 55565542], [55566511, 55566637], [55567256, 55567376], [55569548, 55569693], [55571818, 55571936], [55572911, 55573103], [55575857, 55575919], [55586268, 55586429], [55587108, 55587179], [55589119, 55589275], [55590141, 55590301], [55590992, 55591221], [55591335, 55591431], [55595149, 55595247], [55598217, 55598373], [55599742, 55599836], [55600000, 55600086], [55603187, 55603361], [55603478, 55603577], [55604280, 55604391], [55604616, 55604683], [55607288, 55607404], [55608414, 55608468], [55608651, 55608792], [55609799, 55609876], [55611670, 55611782], [55612601, 55612733], [55613321, 55613471], [55614135, 55614243], [55619542, 55619590], [55619791, 55619953], [55620043, 55620139], [55620343, 55620451], [55622620, 55622724], [55622928, 55623043], [55624550, 55624709], [55625283, 55625358], [55627871, 55627937], [55631557, 55631623], [55632240, 55632276], [55637228, 55637351], [55638049, 55638193], [55642048, 55642116], [55643639, 55643805], [55680462, 55680786]]	[[55534717, 55534780], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541196], [55542907, 55542973], [55544210, 55544324], [55545210, 55545332], [55546994, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55551711], [55555299, 55555413], [55557695, 55557799], [55558493, 55558589], [55559609, 55559760], [55560927, 55561069], [55562170, 55562295], [55562624, 55562845], [55563270, 55563390], [55563615, 55563757], [55564148, 55564231], [55565443, 55565542], [55566511, 55566637], [55567256, 55567376], [55569548, 55569693], [55571818, 55571936], [55572911, 55573103], [55575857, 55575919], [55586268, 55586429], [55587108, 55587179], [55589119, 55589275], [55590141, 55590301], [55590992, 55591221], [55591335, 55591431], [55595149, 55595247], [55598217, 55598373], [55599742, 55599836], [55600000, 55600086], [55603187, 55603361], [55603478, 55603577], [55604280, 55604391], [55604616, 55604683], [55607288, 55607404], [55608414, 55608468], [55608651, 55608792], [55609799, 55609876], [55611670, 55611782], [55612601, 55612733], [55613321, 55613471], [55614135, 55614243], [55619542, 55619590], [55619791, 55619953], [55620043, 55620139], [55620343, 55620451], [55622620, 55622724], [55622928, 55623043], [55624550, 55624709], [55625283, 55625358], [55627871, 55627937], [55631557, 55631623], [55632240, 55632276], [55637228, 55637351], [55638049, 55638193], [55642048, 55642116], [55643639, 55643805], [55680462, 55680786]]
ENST00000407756	[[55532040, 55534780], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541196], [55542907, 55542973], [55544210, 55544324], [55545210, 55545332], [55546994, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55551711], [55555299, 55555413], [55557695, 55557799], [55558493, 55558589], [55559609, 55559760], [55560927, 55561069], [55562170, 55562295], [55562624, 55562845], [55563270, 55563390], [55563615, 55563757], [55564148, 55564231], [55565443, 55565542], [55566511, 55566637], [55567256, 55567376], [55569548, 55569693], [55571818, 55571936], [55572911, 55573103], [55575857, 55575919], [55586268, 55586429], [55587108, 55587179], [55589119, 55589275], [55590141, 55590301], [55590992, 55591221], [55591335, 55591431], [55595149, 55595247], [55598217, 55598373], [55599742, 55599836], [55600000, 55600086], [55603187, 55603361], [55603478, 55603577], [55604280, 55604391], [55604616, 55604683], [55607288, 55607404], [55608414, 55608468], [55608651, 55608792], [55609799, 55609876], [55611670, 55611782], [55612601, 55612733], [55613321, 55613471], [55614135, 55614243], [55619791, 55619953], [55620343, 55620451], [55622620, 55622724], [55622928, 55623043], [55624550, 55624709], [55625283, 55625358], [55627871, 55627937], [55631557, 55631623], [55632240, 55632276], [55637228, 55637351], [55638049, 55638193], [55642048, 55642116], [55680608, 55680762]]	[[55534717, 55534780], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541196], [55542907, 55542973], [55544210, 55544324], [55545210, 55545332], [55546994, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55551711], [55555299, 55555413], [55557695, 55557799], [55558493, 55558589], [55559609, 55559760], [55560927, 55561069], [55562170, 55562295], [55562624, 55562845], [55563270, 55563390], [55563615, 55563757], [55564148, 55564231], [55565443, 55565542], [55566511, 55566637], [55567256, 55567376], [55569548, 55569693], [55571818, 55571936], [55572911, 55573103], [55575857, 55575919], [55586268, 55586429], [55587108, 55587179], [55589119, 55589275], [55590141, 55590301], [55590992, 55591221], [55591335, 55591431], [55595149, 55595247], [55598217, 55598373], [55599742, 55599836], [55600000, 55600086], [55603187, 55603361], [55603478, 55603577], [55604280, 55604391], [55604616, 55604683], [55607288, 55607404], [55608414, 55608468], [55608651, 55608792], [55609799, 55609876], [55611670, 55611782], [55612601, 55612733], [55613321, 55613471], [55614135, 55614243], [55619791, 55619953], [55620343, 55620451], [55622620, 55622724], [55622928, 55623043], [55624550, 55624709], [55625283, 55625358], [55627871, 55627937], [55631557, 55631623], [55632240, 55632276], [55637228, 55637351], [55638049, 55638193], [55642048, 55642116], [55680608, 55680762]]
ENST00000484447	[[55536945, 55537163], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541172]]	None
ENST00000480962	[[55537485, 55537597], [55537989, 55538076], [55538458, 55538665]]	None
ENST00000472566	[[55547059, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55552097]]	None
ENST00000512504	[[55549515, 55549561], [55550065, 55550094], [55551614, 55552107]]	None
ENST00000482197	[[55559225, 55559760], [55560927, 55560992]]	None
NM_015306	[[55532031, 55534780], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541196], [55542907, 55542973], [55544210, 55544324], [55545210, 55545332], [55546994, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55551711], [55555299, 55555413], [55557695, 55557799], [55558493, 55558589], [55559609, 55559760], [55560927, 55561069], [55562170, 55562295], [55562624, 55562845], [55563270, 55563390], [55563615, 55563757], [55564148, 55564231], [55565443, 55565542], [55566511, 55566637], [55567256, 55567376], [55569548, 55569693], [55571818, 55571936], [55572911, 55573103], [55575857, 55575919], [55586268, 55586429], [55587108, 55587179], [55589119, 55589275], [55590141, 55590301], [55590992, 55591221], [55591335, 55591431], [55595149, 55595247], [55598217, 55598373], [55599742, 55599836], [55600000, 55600086], [55603187, 55603361], [55603478, 55603577], [55604280, 55604391], [55604616, 55604683], [55607288, 55607404], [55608414, 55608468], [55608651, 55608792], [55609799, 55609876], [55611670, 55611782], [55612601, 55612733], [55613321, 55613471], [55614135, 55614243], [55619542, 55619590], [55619791, 55619953], [55620043, 55620139], [55620343, 55620451], [55622620, 55622724], [55622928, 55623043], [55624550, 55624709], [55625283, 55625358], [55627871, 55627937], [55631557, 55631623], [55632240, 55632276], [55637228, 55637351], [55638049, 55638193], [55642048, 55642116], [55643639, 55643805], [55680462, 55681039]]	[[55534717, 55534780], [55537486, 55537597], [55537989, 55538076], [55538458, 55538534], [55539500, 55539579], [55541129, 55541196], [55542907, 55542973], [55544210, 55544324], [55545210, 55545332], [55546994, 55547097], [55548944, 55549037], [55549444, 55549561], [55551614, 55551711], [55555299, 55555413], [55557695, 55557799], [55558493, 55558589], [55559609, 55559760], [55560927, 55561069], [55562170, 55562295], [55562624, 55562845], [55563270, 55563390], [55563615, 55563757], [55564148, 55564231], [55565443, 55565542], [55566511, 55566637], [55567256, 55567376], [55569548, 55569693], [55571818, 55571936], [55572911, 55573103], [55575857, 55575919], [55586268, 55586429], [55587108, 55587179], [55589119, 55589275], [55590141, 55590301], [55590992, 55591221], [55591335, 55591431], [55595149, 55595247], [55598217, 55598373], [55599742, 55599836], [55600000, 55600086], [55603187, 55603361], [55603478, 55603577], [55604280, 55604391], [55604616, 55604683], [55607288, 55607404], [55608414, 55608468], [55608651, 55608792], [55609799, 55609876], [55611670, 55611782], [55612601, 55612733], [55613321, 55613471], [55614135, 55614243], [55619542, 55619590], [55619791, 55619953], [55620043, 55620139], [55620343, 55620451], [55622620, 55622724], [55622928, 55623043], [55624550, 55624709], [55625283, 55625358], [55627871, 55627937], [55631557, 55631623], [55632240, 55632276], [55637228, 55637351], [55638049, 55638193], [55642048, 55642116], [55643639, 55643805], [55680462, 55680786]]

Promoter

Chrom	Start	End	Description
chr1	55680953	55681050	CAGE_peak_1_at_USP24_5end
chr1	55681116	55681139	CAGE_peak_2_at_USP24_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I055179	55179109	55180206	1.04	[{'connected_gene': 'TTC4', 'score': 9.94}, {'connected_gene': 'USP24', 'score': 0.28}, {'connected_gene': 'GC01P055101', 'score': 0.18}]
chr1	GH01I055054	55054349	55056193	0.43	[{'connected_gene': 'PCSK9', 'score': 6.56}, {'connected_gene': 'USP24', 'score': 6.0}, {'connected_gene': 'GC01P055065', 'score': 0.39}]
chr1	GH01I055192	55192228	55192377	0.72	[{'connected_gene': 'USP24', 'score': 12.39}, {'connected_gene': 'GYG1P3', 'score': 12.36}, {'connected_gene': 'MIR4422HG', 'score': 12.36}, {'connected_gene': 'GC01P055101', 'score': 0.16}]
chr1	GH01I055061	55060937	55063071	0.49	[{'connected_gene': 'USP24', 'score': 12.03}, {'connected_gene': 'GC01P055065', 'score': 0.77}, {'connected_gene': 'PCSK9', 'score': 0.34}]
chr1	GH01I055193	55193212	55194023	0.4	[{'connected_gene': 'USP24', 'score': 12.39}, {'connected_gene': 'MIR4422HG', 'score': 12.39}, {'connected_gene': 'GYG1P3', 'score': 12.36}, {'connected_gene': 'GC01P055101', 'score': 0.16}]
chr1	GH01I055210	55210517	55218630	2.71	[{'connected_gene': 'USP24', 'score': 564.75}, {'connected_gene': 'LOC100507634', 'score': 550.77}, {'connected_gene': 'RPSAP20', 'score': 9.73}, {'connected_gene': 'MIR4422HG', 'score': 0.77}, {'connected_gene': 'GC01P055101', 'score': 0.14}]
chr1	GH01I055287	55287908	55288682	1.17	[{'connected_gene': 'USP24', 'score': 3.6}, {'connected_gene': 'GC01P055238', 'score': 0.25}, {'connected_gene': 'GC01M055291', 'score': 0.22}]
chr1	GH01I055257	55257830	55261243	0.6	[{'connected_gene': 'USP24', 'score': 5.92}, {'connected_gene': 'GC01P055238', 'score': 0.34}, {'connected_gene': 'GC01M055291', 'score': 0.18}]
chr1	GH01I055190	55190190	55190869	0.52	[{'connected_gene': 'USP24', 'score': 0.34}, {'connected_gene': 'GC01P055101', 'score': 0.17}]
chr1	GH01I055128	55128983	55130325	0.63	[{'connected_gene': 'USP24', 'score': 10.45}, {'connected_gene': 'GC01P055101', 'score': 0.31}]
chr1	GH01I055155	55155167	55156957	0.56	[{'connected_gene': 'USP24', 'score': 11.74}, {'connected_gene': 'GC01P055101', 'score': 0.23}]
chr1	GH01I055191	55191823	55191905	0.31	[{'connected_gene': 'USP24', 'score': 0.34}, {'connected_gene': 'GC01P055101', 'score': 0.16}]
chr1	GH01I055209	55209201	55209400	0.92	[{'connected_gene': 'USP24', 'score': 0.44}, {'connected_gene': 'GC01P055101', 'score': 0.14}]
chr1	GH01I055150	55150754	55152462	0.83	[{'connected_gene': 'USP24', 'score': 8.8}, {'connected_gene': 'GC01P055101', 'score': 0.25}]
chr1	GH01I055135	55135721	55137655	0.2	[{'connected_gene': 'USP24', 'score': 10.47}, {'connected_gene': 'GC01P055101', 'score': 0.29}]
chr1	GH01I055197	55196201	55196400	0.58	[{'connected_gene': 'USP24', 'score': 0.37}, {'connected_gene': 'GC01P055101', 'score': 0.16}]
chr1	GH01I055127	55127735	55128635	0.86	[{'connected_gene': 'USP24', 'score': 11.51}, {'connected_gene': 'GC01P055101', 'score': 0.31}]
chr1	GH01I055171	55171294	55174894	0.38	[{'connected_gene': 'USP24', 'score': 11.25}, {'connected_gene': 'GC01P055101', 'score': 0.19}]
chr1	GH01I055196	55196600	55197760	1.24	[{'connected_gene': 'USP24', 'score': 0.37}, {'connected_gene': 'GC01P055101', 'score': 0.15}]
chr1	GH01I055194	55191939	55192040	0.46	[{'connected_gene': 'USP24', 'score': 0.34}, {'connected_gene': 'GC01P055101', 'score': 0.16}]
chr1	GH01I055204	55204813	55205400	1.2	[{'connected_gene': 'USP24', 'score': 10.22}, {'connected_gene': 'GC01P055101', 'score': 0.15}]
chr1	GH01I055163	55163865	55165803	0.49	[{'connected_gene': 'USP24', 'score': 11.37}, {'connected_gene': 'GC01P055101', 'score': 0.21}]
chr1	GH01I055081	55081270	55081875	0.2	[{'connected_gene': 'TMEM61', 'score': 9.87}, {'connected_gene': 'GC01M055068', 'score': 0.39}, {'connected_gene': 'GC01M055067', 'score': 0.39}, {'connected_gene': 'GC01P055101', 'score': 0.34}, {'connected_gene': 'USP24', 'score': 0.12}]
chr1	GH01I055071	55071608	55071717	0.65	[{'connected_gene': 'TMEM61', 'score': 9.98}, {'connected_gene': 'GC01M055068', 'score': 0.44}, {'connected_gene': 'GC01M055067', 'score': 0.44}, {'connected_gene': 'GC01P055101', 'score': 0.29}, {'connected_gene': 'USP24', 'score': 0.11}]
chr1	GH01I054948	54948289	54948554	0.51	[{'connected_gene': 'TMEM61', 'score': 12.54}, {'connected_gene': 'ENSG00000233271', 'score': 12.48}, {'connected_gene': 'ENSG00000242396', 'score': 11.04}, {'connected_gene': 'DHCR24', 'score': 11.04}, {'connected_gene': 'ENSG00000233203', 'score': 11.04}, {'connected_gene': 'TTC22', 'score': 10.08}, {'connected_gene': 'ENSG00000237453', 'score': 10.07}, {'connected_gene': 'USP24', 'score': 1.25}, {'connected_gene': 'PIR41856', 'score': 0.77}, {'connected_gene': 'GC01M054958', 'score': 0.44}]
chr1	GH01I055195	55195001	55195827	0.69	[{'connected_gene': 'MIR4422HG', 'score': 12.39}, {'connected_gene': 'GYG1P3', 'score': 12.36}, {'connected_gene': 'USP24', 'score': 0.37}, {'connected_gene': 'GC01P055101', 'score': 0.16}]
chr1	GH01I055064	55064108	55064600	0.69	[{'connected_gene': 'GC01P055065', 'score': 550.77}, {'connected_gene': 'USP24', 'score': 13.27}, {'connected_gene': 'PCSK9', 'score': 0.34}]
chr1	GH01I055140	55140208	55141655	1.02	[{'connected_gene': 'GC01P055101', 'score': 0.28}, {'connected_gene': 'USP24', 'score': 0.19}]
chr1	GH01I054945	54945002	54946175	1.16	[{'connected_gene': 'PIR41856', 'score': 550.77}, {'connected_gene': 'TMEM61', 'score': 23.52}, {'connected_gene': 'ENSG00000233271', 'score': 12.46}, {'connected_gene': 'ENSG00000242396', 'score': 10.69}, {'connected_gene': 'DHCR24', 'score': 10.69}, {'connected_gene': 'ENSG00000233203', 'score': 10.69}, {'connected_gene': 'TTC22', 'score': 10.08}, {'connected_gene': 'ENSG00000237453', 'score': 10.07}, {'connected_gene': 'USP24', 'score': 1.61}, {'connected_gene': 'GC01M054936', 'score': 0.44}]