PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000261296	[[95226307, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246161], [95248304, 95248511]]	[[95227035, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246161], [95248304, 95248390]]
ENST00000498294	[[95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246161], [95248228, 95248496]]	None
ENST00000470480	[[95231539, 95232207], [95233344, 95233443]]	None
NM_001304430	[[95226307, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246161], [95248228, 95248529]]	[[95227035, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246151]]
NM_014305	[[95226307, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246161], [95248304, 95248529]]	[[95227035, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243106, 95243197], [95244494, 95244563], [95246094, 95246161], [95248304, 95248390]]
NR_130731	[[95226307, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95243110, 95243197], [95244494, 95244563], [95246094, 95246161], [95248304, 95248529]]	None
NR_130732	[[95226307, 95227106], [95228567, 95228665], [95229624, 95229683], [95230258, 95230424], [95230983, 95231027], [95232147, 95232207], [95233344, 95233443], [95235347, 95235490], [95244494, 95244563], [95246094, 95246161], [95248304, 95248529]]	None

Promoter

Chrom	Start	End	Description
chr13	95248391	95248398	CAGE_peak_4_at_TGDS_5end
chr13	95248399	95248442	CAGE_peak_1_at_TGDS_5end
chr13	95248461	95248472	CAGE_peak_5_at_TGDS_5end
chr13	95248489	95248510	CAGE_peak_3_at_TGDS_5end
chr13	95248511	95248537	CAGE_peak_2_at_TGDS_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I095551	95551998	95553822	1.26	[{'connected_gene': 'CLDN10', 'score': 550.13}, {'connected_gene': 'TGDS', 'score': 9.91}, {'connected_gene': 'DNAJC3', 'score': 6.15}, {'connected_gene': 'DNAJC3-AS1', 'score': 5.48}, {'connected_gene': 'GC13P095540', 'score': 0.39}, {'connected_gene': 'GC13M095580', 'score': 0.31}]
chr13	GH13I094594	94594378	94596890	2	[{'connected_gene': 'TGDS', 'score': 550.77}, {'connected_gene': 'GPR180', 'score': 65.15}, {'connected_gene': 'DCT', 'score': 0.25}]
chr13	GH13I094617	94617527	94617656	0.56	[{'connected_gene': 'TGDS', 'score': 11.68}, {'connected_gene': 'GC13P094634', 'score': 0.37}, {'connected_gene': 'GPR180', 'score': 0.37}]
chr13	GH13I094481	94481629	94482077	0.52	[{'connected_gene': 'TGDS', 'score': 13.68}, {'connected_gene': 'TRF-GAA1-5', 'score': 0.2}, {'connected_gene': 'DCT', 'score': 0.2}, {'connected_gene': 'GC13M094348', 'score': 0.12}]
chr13	GH13I094482	94482087	94482236	0.52	[{'connected_gene': 'TGDS', 'score': 13.68}, {'connected_gene': 'TRF-GAA1-5', 'score': 0.2}, {'connected_gene': 'DCT', 'score': 0.2}, {'connected_gene': 'GC13M094348', 'score': 0.12}]
chr13	GH13I094600	94600789	94603402	2.01	[{'connected_gene': 'GPR180', 'score': 618.24}, {'connected_gene': 'TGDS', 'score': 10.32}, {'connected_gene': 'GC13P094634', 'score': 0.29}]
chr13	GH13I094558	94558609	94560369	0.2	[{'connected_gene': 'GPR180', 'score': 31.32}, {'connected_gene': 'DCT', 'score': 0.44}, {'connected_gene': 'TGDS', 'score': 0.28}]
chr13	GH13I094710	94710047	94712184	0.93	[{'connected_gene': 'SOX21', 'score': 550.77}, {'connected_gene': 'GC13M094711', 'score': 550.77}, {'connected_gene': 'SOX21-AS1', 'score': 550.77}, {'connected_gene': 'TGDS', 'score': 10.02}, {'connected_gene': 'LOC101927248', 'score': 0.77}]
chr13	GH13I095253	95253861	95257403	0.94	[{'connected_gene': 'ABCC4', 'score': 21.26}, {'connected_gene': 'TGDS', 'score': 12.79}, {'connected_gene': 'LOC102724149', 'score': 0.25}, {'connected_gene': 'GC13M095121', 'score': 0.12}]
chr13	GH13I095534	95534018	95536016	0.97	[{'connected_gene': 'CLDN10-AS1', 'score': 559.08}, {'connected_gene': 'TGDS', 'score': 23.46}, {'connected_gene': 'ABCC4', 'score': 10.32}, {'connected_gene': 'CLDN10', 'score': 10.09}, {'connected_gene': 'GC13P095540', 'score': 0.44}]