PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376215	[[26986587, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035727]]	[[26986640, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035402]]
ENST00000376203	[[26986594, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013056], [27031425, 27031506], [27035261, 27035724]]	[[26986640, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013056], [27031425, 27031506], [27035261, 27035266]]
ENST00000473224	[[26994236, 26994323], [26998566, 26998697], [27009063, 27009288], [27012734, 27012846], [27012942, 27012948]]	None
ENST00000491711	[[27009271, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27029573, 27029746], [27031425, 27031506], [27035261, 27035470]]	[[27009271, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27029573, 27029615]]
ENST00000470978	[[27023579, 27023652], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035711]]	None
NM_014317	[[26986352, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035727]]	[[26986640, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035402]]
NM_001321978	[[26986352, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013056], [27031425, 27031506], [27035261, 27035727]]	[[26986640, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009146, 27009288], [27012734, 27012846], [27012942, 27013056], [27031425, 27031506], [27035261, 27035266]]
NM_001321979	[[26986352, 26986769], [26991090, 26991123], [26993605, 26993670], [26994214, 26994323], [26998566, 26998697], [27009063, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035727]]	[[27009189, 27009288], [27012734, 27012846], [27012942, 27013052], [27024168, 27024249], [27024394, 27024508], [27031425, 27031506], [27035261, 27035402]]

Promoter

Chrom	Start	End	Description
chr10	26986102	26986129	CAGE_peak_4_at_PDSS1_5end
chr10	26986138	26986149	CAGE_peak_10_at_PDSS1_5end
chr10	26986180	26986208	CAGE_peak_5_at_PDSS1_5end
chr10	26986212	26986230	CAGE_peak_6_at_PDSS1_5end
chr10	26986245	26986254	CAGE_peak_11_at_PDSS1_5end
chr10	26986285	26986293	CAGE_peak_8_at_PDSS1_5end
chr10	26986294	26986310	CAGE_peak_2_at_PDSS1_5end
chr10	26986374	26986414	CAGE_peak_3_at_PDSS1_5end
chr10	26986582	26986640	CAGE_peak_1_at_PDSS1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I026479	26479202	26490122	1.58	[{'connected_gene': 'APBB1IP', 'score': 18.23}, {'connected_gene': 'YME1L1', 'score': 9.66}, {'connected_gene': 'ABI1', 'score': 6.17}, {'connected_gene': 'PDSS1', 'score': 1.99}, {'connected_gene': 'GC10M026472', 'score': 0.44}, {'connected_gene': 'RNA5SP307', 'score': 0.34}]
chr10	GH10I026430	26430111	26431714	1.45	[{'connected_gene': 'APBB1IP', 'score': 28.95}, {'connected_gene': 'ABI1', 'score': 4.94}, {'connected_gene': 'PDSS1', 'score': 2.29}, {'connected_gene': 'GC10M026395', 'score': 0.28}, {'connected_gene': 'GC10M026396', 'score': 0.28}]
chr10	GH10I026690	26690682	26691086	0.31	[{'connected_gene': 'PDSS1', 'score': 67.27}, {'connected_gene': 'MASTL', 'score': 6.85}, {'connected_gene': 'ABI1', 'score': 5.63}, {'connected_gene': 'SELENOOLP', 'score': 0.37}, {'connected_gene': 'GC10M026672', 'score': 0.34}]
chr10	GH10I026685	26685401	26685759	0.42	[{'connected_gene': 'PDSS1', 'score': 41.13}, {'connected_gene': 'MASTL', 'score': 4.75}, {'connected_gene': 'ABI1', 'score': 3.17}, {'connected_gene': 'SELENOOLP', 'score': 0.44}, {'connected_gene': 'GC10M026672', 'score': 0.31}]
chr10	GH10I026691	26691855	26692049	0.27	[{'connected_gene': 'PDSS1', 'score': 50.25}, {'connected_gene': 'MASTL', 'score': 4.85}, {'connected_gene': 'ABI1', 'score': 3.71}, {'connected_gene': 'SELENOOLP', 'score': 0.37}, {'connected_gene': 'GC10M026672', 'score': 0.34}]
chr10	GH10I026700	26700292	26701974	0.46	[{'connected_gene': 'PDSS1', 'score': 23.34}, {'connected_gene': 'ANKRD26', 'score': 10.68}, {'connected_gene': 'FAM238B', 'score': 5.8}, {'connected_gene': 'ENSG00000279212', 'score': 0.77}, {'connected_gene': 'GC10M026672', 'score': 0.39}]
chr10	GH10I026681	26681801	26683998	0.96	[{'connected_gene': 'PDSS1', 'score': 24.26}, {'connected_gene': 'ABI1', 'score': 13.01}, {'connected_gene': 'MASTL', 'score': 2.25}, {'connected_gene': 'SELENOOLP', 'score': 0.44}, {'connected_gene': 'GC10M026672', 'score': 0.29}]
chr10	GH10I026689	26689512	26689661	0.2	[{'connected_gene': 'PDSS1', 'score': 23.75}, {'connected_gene': 'SELENOOLP', 'score': 0.39}, {'connected_gene': 'GC10M026672', 'score': 0.34}]
chr10	GH10I026665	26665289	26665685	0.64	[{'connected_gene': 'PDSS1', 'score': 7.98}, {'connected_gene': 'SELENOOLP', 'score': 0.39}, {'connected_gene': 'ENSG00000234296', 'score': 0.34}]
chr10	GH10I026696	26696641	26699353	2.02	[{'connected_gene': 'PDSS1', 'score': 573.97}, {'connected_gene': 'ENSG00000279212', 'score': 550.77}, {'connected_gene': 'GC10M026672', 'score': 0.37}]
chr10	GH10I026726	26726212	26726361	0.67	[{'connected_gene': 'PDSS1', 'score': 4.69}, {'connected_gene': 'ENSG00000235843', 'score': 0.44}, {'connected_gene': 'GC10P026755', 'score': 0.31}]
chr10	GH10I026699	26699932	26700081	0.31	[{'connected_gene': 'PDSS1', 'score': 0.77}, {'connected_gene': 'ENSG00000279212', 'score': 0.77}, {'connected_gene': 'GC10M026672', 'score': 0.39}]
chr10	GH10I026684	26684643	26685200	0.8	[{'connected_gene': 'PDSS1', 'score': 23.85}, {'connected_gene': 'SELENOOLP', 'score': 0.44}, {'connected_gene': 'GC10M026672', 'score': 0.31}]
chr10	GH10I026713	26713310	26717149	0.52	[{'connected_gene': 'HSPA8P3', 'score': 550.77}, {'connected_gene': 'GC10M026672', 'score': 550.77}, {'connected_gene': 'PDSS1', 'score': 7.4}, {'connected_gene': 'ENSG00000235843', 'score': 0.77}]
chr10	GH10I026778	26778756	26782951	1.43	[{'connected_gene': 'ABI1', 'score': 17.01}, {'connected_gene': 'MASTL', 'score': 7.09}, {'connected_gene': 'PDSS1', 'score': 6.66}, {'connected_gene': 'ACBD5', 'score': 2.73}, {'connected_gene': 'ENSG00000223027', 'score': 0.44}, {'connected_gene': 'GC10P026755', 'score': 0.31}, {'connected_gene': 'GC10M026780', 'score': 0.28}]
chr10	GH10I026856	26856715	26862150	2.57	[{'connected_gene': 'ABI1', 'score': 566.04}, {'connected_gene': 'MASTL', 'score': 17.91}, {'connected_gene': 'RNU6-946P', 'score': 11.7}, {'connected_gene': 'ENSG00000223027', 'score': 11.68}, {'connected_gene': 'PDSS1', 'score': 2.23}, {'connected_gene': 'ACBD5', 'score': 1.82}, {'connected_gene': 'APBB1IP', 'score': 1.18}, {'connected_gene': 'YME1L1', 'score': 1.17}, {'connected_gene': 'GC10P026852', 'score': 0.44}]
chr10	GH10I026407	26407512	26407793	0.7	[{'connected_gene': 'ABI1', 'score': 2.44}, {'connected_gene': 'PDSS1', 'score': 1.56}, {'connected_gene': 'APBB1IP', 'score': 1.41}, {'connected_gene': 'GC10M026395', 'score': 0.39}, {'connected_gene': 'GC10M026396', 'score': 0.39}]
chr10	GH10I026736	26736801	26740988	1.49	[{'connected_gene': 'ABI1', 'score': 21.57}, {'connected_gene': 'PDSS1', 'score': 13.81}, {'connected_gene': 'ENSG00000223027', 'score': 11.99}, {'connected_gene': 'RNU6-946P', 'score': 11.99}, {'connected_gene': 'MASTL', 'score': 8.38}, {'connected_gene': 'APBB1IP', 'score': 1.28}, {'connected_gene': 'GC10P026755', 'score': 0.37}, {'connected_gene': 'ENSG00000235843', 'score': 0.34}]
chr10	GH10I026721	26721000	26722303	0.31	[{'connected_gene': 'ABI1', 'score': 10.9}, {'connected_gene': 'RNU6-946P', 'score': 10.62}, {'connected_gene': 'ENSG00000223027', 'score': 10.62}, {'connected_gene': 'PDSS1', 'score': 7.02}, {'connected_gene': 'ENSG00000235843', 'score': 0.77}, {'connected_gene': 'GC10P026755', 'score': 0.29}]
chr10	GH10I026733	26733118	26735775	1.11	[{'connected_gene': 'ABI1', 'score': 11.48}, {'connected_gene': 'ENSG00000223027', 'score': 11.03}, {'connected_gene': 'RNU6-946P', 'score': 11.02}, {'connected_gene': 'ENSG00000235843', 'score': 0.37}, {'connected_gene': 'GC10P026755', 'score': 0.34}, {'connected_gene': 'PDSS1', 'score': 0.28}]
chr10	GH10I026745	26745109	26750477	0.38	[{'connected_gene': 'ABI1', 'score': 25.34}, {'connected_gene': 'RNU6-946P', 'score': 11.85}, {'connected_gene': 'ENSG00000223027', 'score': 11.85}, {'connected_gene': 'GC10P026755', 'score': 0.44}, {'connected_gene': 'ENSG00000235843', 'score': 0.29}, {'connected_gene': 'PDSS1', 'score': 0.23}]