Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000373943 [[28099693, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128326], [28136756, 28136800], [28138673, 28138779], [28144361, 28144434], [28146160, 28146243], [28148741, 28150963]] [[28099818, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128326], [28136756, 28136800], [28138673, 28138779], [28144361, 28144434], [28146160, 28146243], [28148741, 28148840]]
ENST00000440806 [[28099745, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128326], [28136756, 28136800], [28138502, 28138571], [28138673, 28138779]] [[28099818, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128326], [28136756, 28136800], [28138502, 28138571], [28138673, 28138779]]
ENST00000468761 [[28099765, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128550]] None
ENST00000481874 [[28136433, 28136800], [28138673, 28138745]] None
ENST00000472285 [[28136757, 28136800], [28138673, 28138779], [28144361, 28144585]] None
NM_177424 [[28099693, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128326], [28136756, 28136800], [28138673, 28138779], [28144361, 28144434], [28146160, 28146243], [28148741, 28150963]] [[28099818, 28099936], [28116072, 28116142], [28120043, 28120143], [28128188, 28128326], [28136756, 28136800], [28138673, 28138779], [28144361, 28144434], [28146160, 28146243], [28148741, 28148840]]
Promoter
Chrom Start End Description
chr1 28099683 28099694 CAGE_peak_2_at_STX12_5end
chr1 28099700 28099779 CAGE_peak_1_at_STX12_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr1 GH01I028135 28135002 28136737 1.42 [{'connected_gene': 'THEMIS2', 'score': 21.45}, {'connected_gene': 'ENSG00000270605', 'score': 13.74}, {'connected_gene': 'PTAFR', 'score': 13.61}, {'connected_gene': 'XKR8', 'score': 12.63}, {'connected_gene': 'PHACTR4', 'score': 7.2}, {'connected_gene': 'MED18', 'score': 4.12}, {'connected_gene': 'SESN2', 'score': 3.53}, {'connected_gene': 'EYA3', 'score': 2.89}, {'connected_gene': 'STX12', 'score': 2.66}, {'connected_gene': 'FAM76A', 'score': 1.21}, {'connected_gene': 'RNU6-176P', 'score': 0.44}, {'connected_gene': 'LOC100131223', 'score': 0.39}]
chr1 GH01I027871 27871950 27877297 2.48 [{'connected_gene': 'THEMIS2', 'score': 576.94}, {'connected_gene': 'FGR', 'score': 30.33}, {'connected_gene': 'RPA2', 'score': 24.09}, {'connected_gene': 'XKR8', 'score': 21.9}, {'connected_gene': 'EYA3', 'score': 17.81}, {'connected_gene': 'PTAFR', 'score': 14.19}, {'connected_gene': 'PPP1R8', 'score': 11.02}, {'connected_gene': 'SCARNA1', 'score': 11.02}, {'connected_gene': 'RNU6-1245P', 'score': 10.99}, {'connected_gene': 'SESN2', 'score': 6.79}, {'connected_gene': 'MED18', 'score': 6.41}, {'connected_gene': 'SMPDL3B', 'score': 6.03}, {'connected_gene': 'ENSG00000269971', 'score': 5.21}, {'connected_gene': 'STX12', 'score': 4.22}, {'connected_gene': 'WASF2', 'score': 3.29}, {'connected_gene': 'GC01M027883', 'score': 0.44}]
chr1 GH01I027816 27816627 27818413 1.04 [{'connected_gene': 'ATP5IF1', 'score': 4.77}, {'connected_gene': 'TRNP1', 'score': 4.41}, {'connected_gene': 'ENSG00000270031', 'score': 0.77}, {'connected_gene': 'STX12', 'score': 0.26}, {'connected_gene': 'ENSG00000269971', 'score': 0.26}]
chr1 GH01I027881 27881966 27893655 1.53 [{'connected_gene': 'RPA2', 'score': 33.93}, {'connected_gene': 'XKR8', 'score': 23.61}, {'connected_gene': 'THEMIS2', 'score': 22.29}, {'connected_gene': 'SMPDL3B', 'score': 22.13}, {'connected_gene': 'ENSG00000227050', 'score': 12.06}, {'connected_gene': 'EYA3', 'score': 11.17}, {'connected_gene': 'SCARNA1', 'score': 10.82}, {'connected_gene': 'PPP1R8', 'score': 10.81}, {'connected_gene': 'RNU6-1245P', 'score': 10.8}, {'connected_gene': 'FGR', 'score': 9.8}, {'connected_gene': 'PTAFR', 'score': 9.35}, {'connected_gene': 'SNHG12', 'score': 5.04}, {'connected_gene': 'MED18', 'score': 4.75}, {'connected_gene': 'SESN2', 'score': 3.63}, {'connected_gene': 'WASF2', 'score': 2.16}, {'connected_gene': 'STX12', 'score': 1.21}, {'connected_gene': 'GC01M027883', 'score': 0.77}]
chr1 GH01I027649 27649801 27651494 1.65 [{'connected_gene': 'LOC729973', 'score': 550.77}, {'connected_gene': 'FGR', 'score': 14.2}, {'connected_gene': 'THEMIS2', 'score': 6.85}, {'connected_gene': 'SNHG12', 'score': 4.32}, {'connected_gene': 'EYA3', 'score': 4.08}, {'connected_gene': 'STX12', 'score': 3.88}, {'connected_gene': 'LINC02574', 'score': 0.39}]
chr1 GH01I027685 27685127 27691077 1.22 [{'connected_gene': 'CHMP1AP1', 'score': 550.77}, {'connected_gene': 'FAM76A', 'score': 11.85}, {'connected_gene': 'STX12', 'score': 11.18}, {'connected_gene': 'RNU6-1245P', 'score': 10.78}, {'connected_gene': 'SCARNA1', 'score': 10.77}, {'connected_gene': 'PPP1R8', 'score': 10.77}, {'connected_gene': 'ACTG1P20', 'score': 10.01}, {'connected_gene': 'RNU6-48P', 'score': 10.01}, {'connected_gene': 'TMEM222', 'score': 10.01}, {'connected_gene': 'ENSG00000270605', 'score': 5.4}, {'connected_gene': 'PTAFR', 'score': 4.3}, {'connected_gene': 'ATP5IF1', 'score': 3.88}, {'connected_gene': 'RNU6-424P', 'score': 0.44}, {'connected_gene': 'ENSG00000225886', 'score': 0.37}]
chr1 GH01I027425 27425965 27439599 1.7 [{'connected_gene': 'ACTG1P20', 'score': 21.45}, {'connected_gene': 'CD164L2', 'score': 20.56}, {'connected_gene': 'WASF2', 'score': 13.15}, {'connected_gene': 'FGR', 'score': 12.91}, {'connected_gene': 'LOC105376892', 'score': 12.37}, {'connected_gene': 'ARID1A', 'score': 11.03}, {'connected_gene': 'FAM76A', 'score': 10.83}, {'connected_gene': 'RNU6-48P', 'score': 10.79}, {'connected_gene': 'TMEM222', 'score': 10.78}, {'connected_gene': 'PHACTR4', 'score': 10.3}, {'connected_gene': 'RNU6-1245P', 'score': 9.27}, {'connected_gene': 'PPP1R8', 'score': 9.27}, {'connected_gene': 'SCARNA1', 'score': 9.27}, {'connected_gene': 'THEMIS2', 'score': 8.99}, {'connected_gene': 'STX12', 'score': 4.27}, {'connected_gene': 'PIR40118', 'score': 0.37}, {'connected_gene': 'ENSG00000241169', 'score': 0.34}]
chr1 GH01I028139 28139022 28140051 1.28 [{'connected_gene': 'PTAFR', 'score': 21.01}, {'connected_gene': 'THEMIS2', 'score': 7.9}, {'connected_gene': 'SESN2', 'score': 5.43}, {'connected_gene': 'ENSG00000270605', 'score': 5.41}, {'connected_gene': 'EYA3', 'score': 5.22}, {'connected_gene': 'PHACTR4', 'score': 4.55}, {'connected_gene': 'STX12', 'score': 3.63}, {'connected_gene': 'MED18', 'score': 2.52}, {'connected_gene': 'XKR8', 'score': 2.3}, {'connected_gene': 'DNAJC8', 'score': 1.27}, {'connected_gene': 'RNU6-176P', 'score': 0.77}, {'connected_gene': 'LOC100131223', 'score': 0.37}]
chr1 GH01I028171 28171201 28177600 2.23 [{'connected_gene': 'PTAFR', 'score': 594.84}, {'connected_gene': 'SNHG12', 'score': 44.9}, {'connected_gene': 'GMEB1', 'score': 40.89}, {'connected_gene': 'TRNAU1AP', 'score': 37.15}, {'connected_gene': 'ACTG1P20', 'score': 33.17}, {'connected_gene': 'YTHDF2', 'score': 32.42}, {'connected_gene': 'PHACTR4', 'score': 32.4}, {'connected_gene': 'NPM1P39', 'score': 30.96}, {'connected_gene': 'SNORA73B', 'score': 28.9}, {'connected_gene': 'ENSG00000231344', 'score': 27.27}, {'connected_gene': 'WASF2', 'score': 23.5}, {'connected_gene': 'RCC1', 'score': 20.04}, {'connected_gene': 'RAB42', 'score': 19.45}, {'connected_gene': 'SNHG3', 'score': 18.83}, {'connected_gene': 'THEMIS2', 'score': 16.94}, {'connected_gene': 'MAP3K6', 'score': 13.24}, {'connected_gene': 'TMEM200B', 'score': 12.98}, {'connected_gene': 'XKR8', 'score': 9.62}, {'connected_gene': 'SESN2', 'score': 9.12}, {'connected_gene': 'EYA3', 'score': 6.31}, {'connected_gene': 'MED18', 'score': 5.54}, {'connected_gene': 'STX12', 'score': 2.9}, {'connected_gene': 'PIR61473', 'score': 0.31}]
chr1 GH01I028136 28136801 28137200 1.15 [{'connected_gene': 'PTAFR', 'score': 11.11}, {'connected_gene': 'SESN2', 'score': 6.99}, {'connected_gene': 'EYA3', 'score': 6.31}, {'connected_gene': 'THEMIS2', 'score': 3.89}, {'connected_gene': 'STX12', 'score': 3.33}, {'connected_gene': 'MED18', 'score': 2.62}, {'connected_gene': 'DNAJC8', 'score': 1.53}, {'connected_gene': 'RNU6-176P', 'score': 0.44}, {'connected_gene': 'LOC100131223', 'score': 0.37}]
chr1 GH01I028170 28170046 28170293 1.17 [{'connected_gene': 'PTAFR', 'score': 10.72}, {'connected_gene': 'SESN2', 'score': 9.67}, {'connected_gene': 'GMEB1', 'score': 7.62}, {'connected_gene': 'EYA3', 'score': 5.81}, {'connected_gene': 'THEMIS2', 'score': 4.77}, {'connected_gene': 'MED18', 'score': 3.93}, {'connected_gene': 'STX12', 'score': 3.01}, {'connected_gene': 'XKR8', 'score': 1.95}, {'connected_gene': 'PIR61473', 'score': 0.34}]
chr1 GH01I028152 28152951 28155201 1.58 [{'connected_gene': 'PTAFR', 'score': 24.63}, {'connected_gene': 'XKR8', 'score': 17.23}, {'connected_gene': 'THEMIS2', 'score': 15.1}, {'connected_gene': 'EYA3', 'score': 14.58}, {'connected_gene': 'DNAJC8', 'score': 10.67}, {'connected_gene': 'ATP5IF1', 'score': 10.66}, {'connected_gene': 'SESN2', 'score': 5.16}, {'connected_gene': 'MED18', 'score': 3.19}, {'connected_gene': 'STX12', 'score': 2.44}, {'connected_gene': 'PIR61473', 'score': 0.44}]
chr1 GH01I028159 28159567 28162243 1.33 [{'connected_gene': 'PTAFR', 'score': 31.77}, {'connected_gene': 'XKR8', 'score': 19.06}, {'connected_gene': 'ACTG1P20', 'score': 15.41}, {'connected_gene': 'EYA3', 'score': 15.26}, {'connected_gene': 'SNHG12', 'score': 14.69}, {'connected_gene': 'TRNAU1AP', 'score': 13.81}, {'connected_gene': 'THEMIS2', 'score': 13.14}, {'connected_gene': 'FAM76A', 'score': 13.11}, {'connected_gene': 'TMEM200B', 'score': 12.61}, {'connected_gene': 'NPM1P39', 'score': 11.46}, {'connected_gene': 'MAP3K6', 'score': 10.97}, {'connected_gene': 'PHACTR4', 'score': 10.64}, {'connected_gene': 'ENSG00000231344', 'score': 10.37}, {'connected_gene': 'SESN2', 'score': 5.34}, {'connected_gene': 'STX12', 'score': 4.3}, {'connected_gene': 'MED18', 'score': 3.28}, {'connected_gene': 'PIR61473', 'score': 0.39}]
chr1 GH01I027912 27912375 27912711 0.71 [{'connected_gene': 'PTAFR', 'score': 8.75}, {'connected_gene': 'FGR', 'score': 5.27}, {'connected_gene': 'EYA3', 'score': 5.21}, {'connected_gene': 'THEMIS2', 'score': 4.49}, {'connected_gene': 'SESN2', 'score': 2.82}, {'connected_gene': 'STX12', 'score': 2.7}, {'connected_gene': 'RPA2', 'score': 0.77}, {'connected_gene': 'GC01M027883', 'score': 0.31}]
chr1 GH01I028156 28156601 28157400 0.95 [{'connected_gene': 'PTAFR', 'score': 30.83}, {'connected_gene': 'ENSG00000270605', 'score': 19.97}, {'connected_gene': 'EYA3', 'score': 18.19}, {'connected_gene': 'THEMIS2', 'score': 11.08}, {'connected_gene': 'SESN2', 'score': 7.75}, {'connected_gene': 'XKR8', 'score': 5.0}, {'connected_gene': 'STX12', 'score': 4.62}, {'connected_gene': 'MED18', 'score': 3.67}, {'connected_gene': 'DNAJC8', 'score': 1.42}, {'connected_gene': 'PIR61473', 'score': 0.44}]
chr1 GH01I028110 28110402 28114799 1.68 [{'connected_gene': 'PTAFR', 'score': 27.96}, {'connected_gene': 'EYA3', 'score': 23.47}, {'connected_gene': 'SNHG12', 'score': 19.22}, {'connected_gene': 'FGR', 'score': 18.02}, {'connected_gene': 'GMEB1', 'score': 15.08}, {'connected_gene': 'ACTG1P20', 'score': 14.96}, {'connected_gene': 'TRNAU1AP', 'score': 14.0}, {'connected_gene': 'RNU7-29P', 'score': 12.81}, {'connected_gene': 'RNU6-176P', 'score': 12.81}, {'connected_gene': 'PHACTR4', 'score': 11.42}, {'connected_gene': 'SNORA73B', 'score': 11.15}, {'connected_gene': 'YTHDF2', 'score': 11.14}, {'connected_gene': 'SNHG3', 'score': 10.22}, {'connected_gene': 'NPM1P39', 'score': 10.12}, {'connected_gene': 'ENSG00000231344', 'score': 10.05}, {'connected_gene': 'THEMIS2', 'score': 9.46}, {'connected_gene': 'SCARNA1', 'score': 9.26}, {'connected_gene': 'RNU6-1245P', 'score': 8.96}, {'connected_gene': 'PPP1R8', 'score': 8.96}, {'connected_gene': 'SESN2', 'score': 8.84}, {'connected_gene': 'RPA2', 'score': 6.9}, {'connected_gene': 'STX12', 'score': 4.88}, {'connected_gene': 'ENSG00000270605', 'score': 4.7}, {'connected_gene': 'MED18', 'score': 4.58}, {'connected_gene': 'DNAJC8', 'score': 1.93}, {'connected_gene': 'XKR8', 'score': 1.42}, {'connected_gene': 'ENSG00000228943', 'score': 0.77}, {'connected_gene': 'LOC100131223', 'score': 0.44}]
chr1 GH01I028160 28159105 28159538 1.01 [{'connected_gene': 'PTAFR', 'score': 27.4}, {'connected_gene': 'EYA3', 'score': 17.43}, {'connected_gene': 'ACTG1P20', 'score': 15.41}, {'connected_gene': 'SNHG12', 'score': 14.69}, {'connected_gene': 'TRNAU1AP', 'score': 13.81}, {'connected_gene': 'FAM76A', 'score': 13.11}, {'connected_gene': 'TMEM200B', 'score': 12.61}, {'connected_gene': 'NPM1P39', 'score': 11.46}, {'connected_gene': 'THEMIS2', 'score': 11.38}, {'connected_gene': 'MAP3K6', 'score': 10.97}, {'connected_gene': 'PHACTR4', 'score': 10.64}, {'connected_gene': 'ENSG00000231344', 'score': 10.37}, {'connected_gene': 'SESN2', 'score': 8.42}, {'connected_gene': 'STX12', 'score': 4.81}, {'connected_gene': 'XKR8', 'score': 4.05}, {'connected_gene': 'MED18', 'score': 3.91}, {'connected_gene': 'DNAJC8', 'score': 1.61}, {'connected_gene': 'PIR61473', 'score': 0.39}]
chr1 GH01I028122 28122801 28124459 1.32 [{'connected_gene': 'PTAFR', 'score': 33.95}, {'connected_gene': 'EYA3', 'score': 24.73}, {'connected_gene': 'DNAJC8', 'score': 21.0}, {'connected_gene': 'FGR', 'score': 13.33}, {'connected_gene': 'ATP5IF1', 'score': 10.39}, {'connected_gene': 'PHACTR4', 'score': 9.73}, {'connected_gene': 'SESN2', 'score': 9.17}, {'connected_gene': 'THEMIS2', 'score': 9.16}, {'connected_gene': 'SCARNA1', 'score': 8.98}, {'connected_gene': 'RNU6-1245P', 'score': 8.97}, {'connected_gene': 'PPP1R8', 'score': 8.97}, {'connected_gene': 'STX12', 'score': 5.26}, {'connected_gene': 'MAP3K6', 'score': 4.63}, {'connected_gene': 'MED18', 'score': 3.91}, {'connected_gene': 'XKR8', 'score': 2.38}, {'connected_gene': 'LOC100131223', 'score': 0.77}, {'connected_gene': 'RNU6-176P', 'score': 0.37}]
chr1 GH01I028125 28125401 28129859 1.48 [{'connected_gene': 'PTAFR', 'score': 25.41}, {'connected_gene': 'EYA3', 'score': 21.07}, {'connected_gene': 'DNAJC8', 'score': 12.45}, {'connected_gene': 'FGR', 'score': 11.23}, {'connected_gene': 'ATP5IF1', 'score': 11.06}, {'connected_gene': 'PPP1R8', 'score': 9.17}, {'connected_gene': 'SCARNA1', 'score': 9.17}, {'connected_gene': 'RNU6-1245P', 'score': 9.16}, {'connected_gene': 'THEMIS2', 'score': 7.05}, {'connected_gene': 'SESN2', 'score': 5.7}, {'connected_gene': 'STX12', 'score': 4.32}, {'connected_gene': 'MED18', 'score': 2.8}, {'connected_gene': 'XKR8', 'score': 1.32}, {'connected_gene': 'LOC100131223', 'score': 0.44}, {'connected_gene': 'RNU6-176P', 'score': 0.37}]
chr1 GH01I028168 28168850 28169800 1.46 [{'connected_gene': 'PTAFR', 'score': 15.55}, {'connected_gene': 'GMEB1', 'score': 13.23}, {'connected_gene': 'SESN2', 'score': 10.58}, {'connected_gene': 'EYA3', 'score': 7.75}, {'connected_gene': 'THEMIS2', 'score': 4.93}, {'connected_gene': 'STX12', 'score': 3.84}, {'connected_gene': 'MED18', 'score': 3.38}, {'connected_gene': 'DNAJC8', 'score': 1.63}, {'connected_gene': 'PIR61473', 'score': 0.34}]
chr1 GH01I028106 28106661 28106795 0.26 [{'connected_gene': 'PTAFR', 'score': 21.02}, {'connected_gene': 'RNU6-176P', 'score': 12.8}, {'connected_gene': 'RNU7-29P', 'score': 12.8}, {'connected_gene': 'SCARNA1', 'score': 9.26}, {'connected_gene': 'RNU6-1245P', 'score': 8.87}, {'connected_gene': 'PPP1R8', 'score': 8.87}, {'connected_gene': 'FGR', 'score': 8.18}, {'connected_gene': 'EYA3', 'score': 5.9}, {'connected_gene': 'THEMIS2', 'score': 5.11}, {'connected_gene': 'SESN2', 'score': 5.07}, {'connected_gene': 'STX12', 'score': 3.75}, {'connected_gene': 'MED18', 'score': 2.75}, {'connected_gene': 'DNAJC8', 'score': 1.64}, {'connected_gene': 'ENSG00000228943', 'score': 0.77}, {'connected_gene': 'SPCS2P4', 'score': 0.39}]
chr1 GH01I028104 28104707 28105859 1.29 [{'connected_gene': 'PTAFR', 'score': 14.95}, {'connected_gene': 'RNU6-176P', 'score': 12.8}, {'connected_gene': 'RNU7-29P', 'score': 12.8}, {'connected_gene': 'DNAJC8', 'score': 10.77}, {'connected_gene': 'ATP5IF1', 'score': 10.76}, {'connected_gene': 'RNU6-1245P', 'score': 9.96}, {'connected_gene': 'PPP1R8', 'score': 9.96}, {'connected_gene': 'SCARNA1', 'score': 9.96}, {'connected_gene': 'STX12', 'score': 2.17}, {'connected_gene': 'FGR', 'score': 2.16}, {'connected_gene': 'EYA3', 'score': 2.0}, {'connected_gene': 'SESN2', 'score': 1.73}, {'connected_gene': 'THEMIS2', 'score': 1.36}, {'connected_gene': 'ENSG00000228943', 'score': 0.77}, {'connected_gene': 'SPCS2P4', 'score': 0.44}]
chr1 GH01I027829 27829713 27833396 2.07 [{'connected_gene': 'PPP1R8', 'score': 550.77}, {'connected_gene': 'YTHDF2', 'score': 13.48}, {'connected_gene': 'GMEB1', 'score': 13.13}, {'connected_gene': 'SNORA73B', 'score': 12.88}, {'connected_gene': 'SNHG12', 'score': 12.75}, {'connected_gene': 'SNHG3', 'score': 12.43}, {'connected_gene': 'TRNAU1AP', 'score': 11.15}, {'connected_gene': 'WASF2', 'score': 10.43}, {'connected_gene': 'RCC1', 'score': 9.93}, {'connected_gene': 'STX12', 'score': 7.32}, {'connected_gene': 'TRNP1', 'score': 4.4}, {'connected_gene': 'GC01P027856', 'score': 0.77}]
chr1 GH01I027941 27941590 27944728 1.48 [{'connected_gene': 'SMPDL3B', 'score': 39.68}, {'connected_gene': 'THEMIS2', 'score': 29.78}, {'connected_gene': 'PTAFR', 'score': 23.54}, {'connected_gene': 'FGR', 'score': 17.34}, {'connected_gene': 'XKR8', 'score': 17.19}, {'connected_gene': 'RPA2', 'score': 10.73}, {'connected_gene': 'SESN2', 'score': 4.63}, {'connected_gene': 'MED18', 'score': 4.54}, {'connected_gene': 'EYA3', 'score': 4.12}, {'connected_gene': 'WASF2', 'score': 4.04}, {'connected_gene': 'STX12', 'score': 3.36}, {'connected_gene': 'ENSG00000227050', 'score': 0.37}]
chr1 GH01I027771 27771659 27775071 2.29 [{'connected_gene': 'STX12', 'score': 553.37}, {'connected_gene': 'ENSG00000269971', 'score': 550.77}, {'connected_gene': 'GMEB1', 'score': 14.41}, {'connected_gene': 'ACTG1P20', 'score': 13.12}, {'connected_gene': 'RNU6-1245P', 'score': 11.68}, {'connected_gene': 'PPP1R8', 'score': 11.67}, {'connected_gene': 'SCARNA1', 'score': 11.65}, {'connected_gene': 'FAM76A', 'score': 11.62}, {'connected_gene': 'ENSG00000231344', 'score': 11.25}, {'connected_gene': 'PHACTR4', 'score': 10.27}, {'connected_gene': 'SNHG12', 'score': 10.13}, {'connected_gene': 'YTHDF2', 'score': 9.88}, {'connected_gene': 'SESN2', 'score': 3.17}, {'connected_gene': 'PTAFR', 'score': 2.87}, {'connected_gene': 'FGR', 'score': 2.51}, {'connected_gene': 'EYA3', 'score': 1.3}]
chr1 GH01I027712 27712773 27714148 0.6 [{'connected_gene': 'STX12', 'score': 16.79}, {'connected_gene': 'ENSG00000225886', 'score': 11.96}, {'connected_gene': 'RNU6-1245P', 'score': 10.62}, {'connected_gene': 'PPP1R8', 'score': 10.61}, {'connected_gene': 'SCARNA1', 'score': 10.61}, {'connected_gene': 'ACTG1P20', 'score': 9.74}, {'connected_gene': 'RNU6-48P', 'score': 9.74}, {'connected_gene': 'TMEM222', 'score': 9.74}, {'connected_gene': 'FAM76A', 'score': 0.39}, {'connected_gene': 'GC01P027694', 'score': 0.37}]
chr1 GH01I027862 27862001 27866399 1.56 [{'connected_gene': 'FGR', 'score': 26.47}, {'connected_gene': 'THEMIS2', 'score': 17.45}, {'connected_gene': 'PTAFR', 'score': 15.32}, {'connected_gene': 'XKR8', 'score': 7.69}, {'connected_gene': 'MED18', 'score': 4.75}, {'connected_gene': 'SESN2', 'score': 4.31}, {'connected_gene': 'STX12', 'score': 3.58}, {'connected_gene': 'EYA3', 'score': 3.39}, {'connected_gene': 'WASF2', 'score': 3.2}, {'connected_gene': 'PIR39917', 'score': 0.39}]
chr1 GH01I027647 27647168 27647484 0.83 [{'connected_gene': 'FGR', 'score': 11.91}, {'connected_gene': 'THEMIS2', 'score': 3.69}, {'connected_gene': 'EYA3', 'score': 3.58}, {'connected_gene': 'STX12', 'score': 3.05}, {'connected_gene': 'LOC729973', 'score': 0.77}, {'connected_gene': 'GC01M027642', 'score': 0.77}]
chr1 GH01I027614 27614139 27637536 2.72 [{'connected_gene': 'FGR', 'score': 579.49}, {'connected_gene': 'ACTG1P20', 'score': 43.35}, {'connected_gene': 'ARID1A', 'score': 27.33}, {'connected_gene': 'EYA3', 'score': 25.18}, {'connected_gene': 'FAM76A', 'score': 22.52}, {'connected_gene': 'TRNAU1AP', 'score': 21.88}, {'connected_gene': 'NPM1P39', 'score': 21.49}, {'connected_gene': 'THEMIS2', 'score': 17.55}, {'connected_gene': 'PTAFR', 'score': 15.09}, {'connected_gene': 'SNHG12', 'score': 14.88}, {'connected_gene': 'GPN2', 'score': 14.19}, {'connected_gene': 'WASF2', 'score': 14.05}, {'connected_gene': 'PHACTR4', 'score': 13.71}, {'connected_gene': 'MAP3K6', 'score': 13.28}, {'connected_gene': 'ENSG00000225886', 'score': 12.23}, {'connected_gene': 'AHDC1', 'score': 11.44}, {'connected_gene': 'ENSG00000231344', 'score': 11.0}, {'connected_gene': 'RCC1', 'score': 10.85}, {'connected_gene': 'GPATCH3', 'score': 10.84}, {'connected_gene': 'RAB42', 'score': 10.6}, {'connected_gene': 'SNORA73B', 'score': 10.41}, {'connected_gene': 'XKR8', 'score': 10.31}, {'connected_gene': 'RNU6-48P', 'score': 10.19}, {'connected_gene': 'TMEM222', 'score': 10.19}, {'connected_gene': 'FAM46B', 'score': 10.1}, {'connected_gene': 'RPA2', 'score': 5.06}, {'connected_gene': 'SYTL1', 'score': 4.28}, {'connected_gene': 'STX12', 'score': 4.12}, {'connected_gene': 'SLC9A1', 'score': 1.65}]
chr1 GH01I027655 27655001 27657001 1.52 [{'connected_gene': 'FGR', 'score': 16.15}, {'connected_gene': 'AHDC1', 'score': 11.56}, {'connected_gene': 'FAM76A', 'score': 10.24}, {'connected_gene': 'RNU6-1245P', 'score': 9.65}, {'connected_gene': 'SCARNA1', 'score': 9.64}, {'connected_gene': 'PPP1R8', 'score': 9.64}, {'connected_gene': 'THEMIS2', 'score': 9.51}, {'connected_gene': 'NUDC', 'score': 6.58}, {'connected_gene': 'STX12', 'score': 5.29}, {'connected_gene': 'EYA3', 'score': 5.11}, {'connected_gene': 'GPN2', 'score': 4.69}, {'connected_gene': 'LOC729973', 'score': 0.44}, {'connected_gene': 'LINC02574', 'score': 0.44}]
chr1 GH01I028090 28090398 28090472 0.25 [{'connected_gene': 'EYA3', 'score': 555.86}, {'connected_gene': 'GC01M028089', 'score': 550.77}, {'connected_gene': 'GC01M028088', 'score': 550.77}, {'connected_gene': 'PTAFR', 'score': 9.73}, {'connected_gene': 'FGR', 'score': 5.81}, {'connected_gene': 'THEMIS2', 'score': 4.7}, {'connected_gene': 'STX12', 'score': 3.63}, {'connected_gene': 'SESN2', 'score': 2.84}, {'connected_gene': 'MED18', 'score': 1.38}, {'connected_gene': 'XKR8', 'score': 1.27}, {'connected_gene': 'SPCS2P4', 'score': 0.44}]
chr1 GH01I027979 27979105 27980201 1.45 [{'connected_gene': 'EYA3', 'score': 39.25}, {'connected_gene': 'FAM76A', 'score': 19.94}, {'connected_gene': 'GMEB1', 'score': 18.14}, {'connected_gene': 'PTAFR', 'score': 17.43}, {'connected_gene': 'THEMIS2', 'score': 16.55}, {'connected_gene': 'YTHDF2', 'score': 15.61}, {'connected_gene': 'ACTG1P20', 'score': 12.38}, {'connected_gene': 'RCC1', 'score': 12.05}, {'connected_gene': 'SMPDL3B', 'score': 12.01}, {'connected_gene': 'RPA2', 'score': 11.65}, {'connected_gene': 'TRNAU1AP', 'score': 11.58}, {'connected_gene': 'PPP1R8', 'score': 10.86}, {'connected_gene': 'SCARNA1', 'score': 10.86}, {'connected_gene': 'RNU6-1245P', 'score': 10.85}, {'connected_gene': 'SNHG12', 'score': 10.2}, {'connected_gene': 'ENSG00000231344', 'score': 9.99}, {'connected_gene': 'ENSG00000270605', 'score': 5.06}, {'connected_gene': 'FGR', 'score': 4.51}, {'connected_gene': 'STX12', 'score': 2.93}, {'connected_gene': 'XKR8', 'score': 1.95}, {'connected_gene': 'SESN2', 'score': 1.82}, {'connected_gene': 'PIR31994', 'score': 0.44}, {'connected_gene': 'ENSG00000238231', 'score': 0.39}]
chr1 GH01I028091 28091001 28091601 1.3 [{'connected_gene': 'EYA3', 'score': 41.24}, {'connected_gene': 'GMEB1', 'score': 14.18}, {'connected_gene': 'PTAFR', 'score': 7.04}, {'connected_gene': 'FGR', 'score': 5.23}, {'connected_gene': 'SESN2', 'score': 3.69}, {'connected_gene': 'THEMIS2', 'score': 3.63}, {'connected_gene': 'STX12', 'score': 2.78}, {'connected_gene': 'MED18', 'score': 1.7}, {'connected_gene': 'DNAJC8', 'score': 1.5}, {'connected_gene': 'SPCS2P4', 'score': 0.44}]
chr1 GH01I027658 27658103 27664401 2.29 [{'connected_gene': 'LINC02574', 'score': 550.77}, {'connected_gene': 'FGR', 'score': 22.39}, {'connected_gene': 'GPN2', 'score': 15.86}, {'connected_gene': 'ACTG1P20', 'score': 15.15}, {'connected_gene': 'THEMIS2', 'score': 10.66}, {'connected_gene': 'ARID1A', 'score': 10.02}, {'connected_gene': 'TRNAU1AP', 'score': 9.81}, {'connected_gene': 'STX12', 'score': 7.77}, {'connected_gene': 'EYA3', 'score': 4.29}, {'connected_gene': 'XKR8', 'score': 1.4}, {'connected_gene': 'FAM76A', 'score': 1.3}, {'connected_gene': 'SYTL1', 'score': 1.25}, {'connected_gene': 'WASF2', 'score': 1.17}, {'connected_gene': 'LOC729973', 'score': 0.39}]
chr1 GH01I027789 27789201 27790552 0.96 [{'connected_gene': 'RNU6-1245P', 'score': 11.64}, {'connected_gene': 'PPP1R8', 'score': 11.6}, {'connected_gene': 'SCARNA1', 'score': 11.6}, {'connected_gene': 'TRNP1', 'score': 4.64}, {'connected_gene': 'STX12', 'score': 0.37}, {'connected_gene': 'ENSG00000269971', 'score': 0.37}, {'connected_gene': 'ENSG00000270031', 'score': 0.29}]
chr1 GH01I027784 27784319 27788819 0.83 [{'connected_gene': 'RNU6-1245P', 'score': 11.62}, {'connected_gene': 'PPP1R8', 'score': 11.6}, {'connected_gene': 'SCARNA1', 'score': 11.59}, {'connected_gene': 'STX12', 'score': 6.1}, {'connected_gene': 'ENSG00000270605', 'score': 4.08}, {'connected_gene': 'ENSG00000269971', 'score': 0.39}, {'connected_gene': 'ENSG00000270031', 'score': 0.29}]
chr1 GH01I027777 27777148 27779509 0.54 [{'connected_gene': 'RNU6-1245P', 'score': 11.69}, {'connected_gene': 'PPP1R8', 'score': 11.68}, {'connected_gene': 'SCARNA1', 'score': 11.67}, {'connected_gene': 'FAM76A', 'score': 11.6}, {'connected_gene': 'STX12', 'score': 7.58}, {'connected_gene': 'SESN2', 'score': 4.65}, {'connected_gene': 'TRNAU1AP', 'score': 4.55}, {'connected_gene': 'ATP5IF1', 'score': 3.9}, {'connected_gene': 'ENSG00000269971', 'score': 0.77}, {'connected_gene': 'ENSG00000270031', 'score': 0.26}]
chr1 GH01I027779 27779801 27780000 0.67 [{'connected_gene': 'RNU6-1245P', 'score': 11.71}, {'connected_gene': 'PPP1R8', 'score': 11.68}, {'connected_gene': 'SCARNA1', 'score': 11.68}, {'connected_gene': 'FAM76A', 'score': 11.6}, {'connected_gene': 'STX12', 'score': 7.73}, {'connected_gene': 'ENSG00000269971', 'score': 0.44}, {'connected_gene': 'ENSG00000270031', 'score': 0.26}]
chr1 GH01I027713 27712530 27712679 0.31 [{'connected_gene': 'ENSG00000225886', 'score': 11.96}, {'connected_gene': 'SCARNA1', 'score': 10.61}, {'connected_gene': 'ACTG1P20', 'score': 9.74}, {'connected_gene': 'RNU6-48P', 'score': 9.74}, {'connected_gene': 'TMEM222', 'score': 9.74}, {'connected_gene': 'STX12', 'score': 5.54}, {'connected_gene': 'FAM76A', 'score': 0.39}, {'connected_gene': 'GC01P027694', 'score': 0.37}]
chr1 GH01I028242 28242729 28250500 2.27 [{'connected_gene': 'ENSG00000271398', 'score': 550.77}, {'connected_gene': 'ENSG00000270605', 'score': 80.77}, {'connected_gene': 'SRSF4', 'score': 39.34}, {'connected_gene': 'GMEB1', 'score': 33.01}, {'connected_gene': 'SNHG12', 'score': 27.56}, {'connected_gene': 'PTAFR', 'score': 25.56}, {'connected_gene': 'ACTG1P20', 'score': 25.51}, {'connected_gene': 'YTHDF2', 'score': 24.94}, {'connected_gene': 'TRNAU1AP', 'score': 23.78}, {'connected_gene': 'PHACTR4', 'score': 23.28}, {'connected_gene': 'EYA3', 'score': 21.77}, {'connected_gene': 'ENSG00000231344', 'score': 18.28}, {'connected_gene': 'RCC1', 'score': 12.09}, {'connected_gene': 'SESN2', 'score': 11.28}, {'connected_gene': 'SNORA73B', 'score': 11.16}, {'connected_gene': 'FAM76A', 'score': 10.35}, {'connected_gene': 'SNHG3', 'score': 10.24}, {'connected_gene': 'RNU7-29P', 'score': 10.06}, {'connected_gene': 'RNU6-176P', 'score': 10.06}, {'connected_gene': 'ENSG00000237934', 'score': 10.04}, {'connected_gene': 'ATP5IF1', 'score': 4.39}, {'connected_gene': 'MED18', 'score': 3.99}, {'connected_gene': 'THEMIS2', 'score': 1.46}, {'connected_gene': 'STX12', 'score': 1.17}]
chr1 GH01I028107 28107774 28108083 0.55 [{'connected_gene': 'ENSG00000228943', 'score': 550.77}, {'connected_gene': 'PTAFR', 'score': 18.26}, {'connected_gene': 'RNU6-176P', 'score': 12.81}, {'connected_gene': 'RNU7-29P', 'score': 12.8}, {'connected_gene': 'SCARNA1', 'score': 9.26}, {'connected_gene': 'RNU6-1245P', 'score': 8.87}, {'connected_gene': 'PPP1R8', 'score': 8.87}, {'connected_gene': 'FGR', 'score': 6.13}, {'connected_gene': 'EYA3', 'score': 4.11}, {'connected_gene': 'THEMIS2', 'score': 3.66}, {'connected_gene': 'STX12', 'score': 3.48}, {'connected_gene': 'SESN2', 'score': 2.56}, {'connected_gene': 'MED18', 'score': 1.47}, {'connected_gene': 'DNAJC8', 'score': 1.32}, {'connected_gene': 'SPCS2P4', 'score': 0.39}]

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