PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000530028	[[49170082, 49172380]]	[[49170373, 49170937]]
ENST00000560490	[[49170332, 49170469], [49170535, 49170982]]	[[49170373, 49170469], [49170535, 49170937]]
ENST00000558295	[[49170332, 49170469], [49171063, 49171656]]	None
NM_014335	[[49170289, 49172380]]	[[49170373, 49170937]]

Promoter

Chrom	Start	End	Description
chr15	49170102	49170111	CAGE_peak_4_at_EID1_5end
chr15	49170113	49170133	CAGE_peak_2_at_EID1_5end
chr15	49170195	49170206	CAGE_peak_3_at_EID1_5end
chr15	49170281	49170365	CAGE_peak_1_at_EID1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I048856	48856805	48857713	0.38	[{'connected_gene': 'SHC4', 'score': 11.46}, {'connected_gene': 'EID1', 'score': 0.34}, {'connected_gene': 'CEP152', 'score': 0.25}]
chr15	GH15I048861	48861944	48862133	0.65	[{'connected_gene': 'SHC4', 'score': 11.87}, {'connected_gene': 'EID1', 'score': 0.37}, {'connected_gene': 'CEP152', 'score': 0.23}]
chr15	GH15I048858	48858207	48859133	0.82	[{'connected_gene': 'SHC4', 'score': 11.46}, {'connected_gene': 'EID1', 'score': 0.37}, {'connected_gene': 'CEP152', 'score': 0.25}]
chr15	GH15I048869	48869615	48870430	0.2	[{'connected_gene': 'SHC4', 'score': 11.41}, {'connected_gene': 'EID1', 'score': 0.44}, {'connected_gene': 'CEP152', 'score': 0.22}]
chr15	GH15I048872	48871664	48871813	0.49	[{'connected_gene': 'SHC4', 'score': 10.85}, {'connected_gene': 'CEP152', 'score': 9.82}, {'connected_gene': 'EID1', 'score': 0.44}]
chr15	GH15I048871	48871168	48871639	0.49	[{'connected_gene': 'SHC4', 'score': 10.75}, {'connected_gene': 'CEP152', 'score': 9.82}, {'connected_gene': 'EID1', 'score': 0.44}]
chr15	GH15I048864	48864942	48869148	0.94	[{'connected_gene': 'SHC4', 'score': 11.4}, {'connected_gene': 'CEP152', 'score': 6.01}, {'connected_gene': 'EID1', 'score': 0.39}]
chr15	GH15I048823	48823004	48824094	0.2	[{'connected_gene': 'SHC4', 'score': 9.97}, {'connected_gene': 'FBN1', 'score': 9.65}, {'connected_gene': 'CEP152', 'score': 5.92}, {'connected_gene': 'EID1', 'score': 0.23}]
chr15	GH15I048878	48877303	48879401	2.01	[{'connected_gene': 'EID1', 'score': 550.77}, {'connected_gene': 'SHC4', 'score': 10.9}, {'connected_gene': 'CEP152', 'score': 10.72}, {'connected_gene': 'GC15M048879', 'score': 0.77}]
chr15	GH15I048877	48877078	48877173	0.31	[{'connected_gene': 'EID1', 'score': 550.77}, {'connected_gene': 'CEP152', 'score': 0.2}, {'connected_gene': 'SHC4', 'score': 0.17}]
chr15	GH15I048833	48833351	48834293	0.46	[{'connected_gene': 'CEP152', 'score': 16.82}, {'connected_gene': 'SHC4', 'score': 10.22}, {'connected_gene': 'EID1', 'score': 0.26}]
chr15	GH15I048855	48855441	48856593	0.95	[{'connected_gene': 'DUT', 'score': 18.68}, {'connected_gene': 'ENSG00000259488', 'score': 13.83}, {'connected_gene': 'SHC4', 'score': 11.46}, {'connected_gene': 'EID1', 'score': 0.34}, {'connected_gene': 'CEP152', 'score': 0.26}]