PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000317811	[[35639734, 35642419]]	[[35640184, 35641498]]
ENST00000532914	[[35641235, 35641609], [35641923, 35642400]]	None
NM_014344	[[35639734, 35642421]]	[[35640184, 35641498]]

Promoter

Chrom	Start	End	Description
chr11	35639520	35639559	CAGE_peak_4_at_FJX1_5end
chr11	35639899	35639959	CAGE_peak_2_at_FJX1_5end
chr11	35639960	35639977	CAGE_peak_3_at_FJX1_5end
chr11	35639997	35640014	CAGE_peak_1_at_FJX1_5end
chr11	35640893	35640918	CAGE_peak_6_at_FJX1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I035605	35605489	35606442	0.58	[{'connected_gene': 'TRIM44', 'score': 10.7}, {'connected_gene': 'PAMR1', 'score': 9.53}, {'connected_gene': 'FJX1', 'score': 0.39}, {'connected_gene': 'ENSG00000254669', 'score': 0.34}, {'connected_gene': 'GC11M035597', 'score': 0.08}]
chr11	GH11I035629	35629283	35631076	1.27	[{'connected_gene': 'TRIM44', 'score': 11.4}, {'connected_gene': 'FJX1', 'score': 0.39}, {'connected_gene': 'ENSG00000254686', 'score': 0.31}, {'connected_gene': 'GC11M035597', 'score': 0.1}]
chr11	GH11I035641	35641219	35641962	0.38	[{'connected_gene': 'TRIM44', 'score': 11.69}, {'connected_gene': 'ENSG00000254686', 'score': 0.37}, {'connected_gene': 'FJX1', 'score': 0.34}, {'connected_gene': 'GC11M035597', 'score': 0.1}]
chr11	GH11I035566	35566996	35568877	0.89	[{'connected_gene': 'PAMR1', 'score': 5.73}, {'connected_gene': 'FJX1', 'score': 5.0}, {'connected_gene': 'GC11P035579', 'score': 0.39}]
chr11	GH11I035587	35587963	35589721	0.66	[{'connected_gene': 'PAMR1', 'score': 9.53}, {'connected_gene': 'ENSG00000254669', 'score': 0.77}, {'connected_gene': 'FJX1', 'score': 0.31}]
chr11	GH11I035558	35558133	35559553	0.38	[{'connected_gene': 'PAMR1', 'score': 19.12}, {'connected_gene': 'FJX1', 'score': 4.57}, {'connected_gene': 'GC11P035579', 'score': 0.34}]
chr11	GH11I035602	35602042	35602892	0.31	[{'connected_gene': 'PAMR1', 'score': 8.83}, {'connected_gene': 'ENSG00000254669', 'score': 0.37}, {'connected_gene': 'FJX1', 'score': 0.37}, {'connected_gene': 'GC11M035597', 'score': 0.08}]
chr11	GH11I035598	35598693	35598842	0.66	[{'connected_gene': 'PAMR1', 'score': 4.54}, {'connected_gene': 'ENSG00000254669', 'score': 0.39}, {'connected_gene': 'FJX1', 'score': 0.37}, {'connected_gene': 'GC11M035597', 'score': 0.08}]
chr11	GH11I035553	35553669	35555882	1.03	[{'connected_gene': 'PAMR1', 'score': 18.58}, {'connected_gene': 'LDLRAD3', 'score': 9.36}, {'connected_gene': 'FJX1', 'score': 1.84}, {'connected_gene': 'GC11P035579', 'score': 0.31}]
chr11	GH11I035617	35617378	35624710	2.56	[{'connected_gene': 'FJX1', 'score': 557.8}, {'connected_gene': 'TRAF6', 'score': 13.94}, {'connected_gene': 'TRIM44', 'score': 10.85}, {'connected_gene': 'COMMD9', 'score': 9.72}, {'connected_gene': 'PAMR1', 'score': 5.29}, {'connected_gene': 'ENSG00000254686', 'score': 0.28}, {'connected_gene': 'GC11M035597', 'score': 0.09}]
chr11	GH11I035811	35811696	35812368	0.2	[{'connected_gene': 'FJX1', 'score': 11.29}, {'connected_gene': 'TRIM44', 'score': 10.34}, {'connected_gene': 'ENSG00000255060', 'score': 9.08}, {'connected_gene': 'GC11P035814', 'score': 0.77}, {'connected_gene': 'GC11M035597', 'score': 0.44}]
chr11	GH11I035810	35810515	35810932	0.2	[{'connected_gene': 'FJX1', 'score': 11.29}, {'connected_gene': 'TRIM44', 'score': 10.34}, {'connected_gene': 'ENSG00000255060', 'score': 9.08}, {'connected_gene': 'GC11P035814', 'score': 0.77}, {'connected_gene': 'GC11M035597', 'score': 0.44}]
chr11	GH11I035592	35592793	35593506	0.69	[{'connected_gene': 'FJX1', 'score': 11.45}, {'connected_gene': 'PAMR1', 'score': 9.61}, {'connected_gene': 'ENSG00000254669', 'score': 0.44}]
chr11	GH11I036131	36131814	36132566	0.59	[{'connected_gene': 'FJX1', 'score': 11.51}, {'connected_gene': 'LDLRAD3', 'score': 9.99}, {'connected_gene': 'PIR54286', 'score': 0.77}, {'connected_gene': 'LOC101928510', 'score': 0.23}]
chr11	GH11I035616	35616313	35616442	0.8	[{'connected_gene': 'FJX1', 'score': 550.77}, {'connected_gene': 'ENSG00000254669', 'score': 0.29}, {'connected_gene': 'GC11M035597', 'score': 0.09}]
chr11	GH11I035618	35616693	35616722	0.79	[{'connected_gene': 'FJX1', 'score': 550.77}, {'connected_gene': 'ENSG00000254669', 'score': 0.29}, {'connected_gene': 'GC11M035597', 'score': 0.09}]
chr11	GH11I036050	36050627	36052660	0.68	[{'connected_gene': 'LDLRAD3', 'score': 10.69}, {'connected_gene': 'FJX1', 'score': 5.5}, {'connected_gene': 'GC11M036020', 'score': 0.37}, {'connected_gene': 'LOC101928510', 'score': 0.31}]
chr11	GH11I035812	35812931	35813080	0.2	[{'connected_gene': 'GC11P035814', 'score': 550.77}, {'connected_gene': 'FJX1', 'score': 11.29}, {'connected_gene': 'TRIM44', 'score': 10.34}, {'connected_gene': 'ENSG00000255060', 'score': 9.08}, {'connected_gene': 'GC11M035597', 'score': 0.44}]
chr11	GH11I035815	35815646	35817030	0.46	[{'connected_gene': 'PIR35060', 'score': 550.77}, {'connected_gene': 'FJX1', 'score': 11.29}, {'connected_gene': 'TRIM44', 'score': 10.45}, {'connected_gene': 'ENSG00000255060', 'score': 9.08}, {'connected_gene': 'GC11P035814', 'score': 0.77}, {'connected_gene': 'PIR45735', 'score': 0.44}]